EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000013629 (Gene tree)
Gene ID
102167672
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
92983 bases
Position
chr2:69717313-69810295
Accession
102167672
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000031107ResIIIPF04851.152.7e-0911
ENSSSCP00000031107BRKPF07533.162.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000034320SMARCA4-2015507XM_013994691ENSSSCP000000311071617 (aa)XP_013850145K7GT64
Gene Model
Click here to download ENSSSCG00000013629's gene model file
Pathways
Pathway IDPathway NameSource
ssc04714ThermogenesisKEGG
ssc05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013629's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000013629SMARCA49875.899ENSSSCG00000005232SMARCA29675.683
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000013629SMARCA410099.876ENSG00000127616SMARCA4100100.000Homo_sapiens
ENSSSCG00000013629SMARCA47587.967ENSAPOG00000003509smarca4a9886.262Acanthochromis_polyacanthus
ENSSSCG00000013629SMARCA49584.070ENSAPOG00000004542SMARCA49883.467Acanthochromis_polyacanthus
ENSSSCG00000013629SMARCA410095.352ENSAMEG00000010868SMARCA410095.352Ailuropoda_melanoleuca
ENSSSCG00000013629SMARCA49787.578ENSACIG00000021550smarca4a9887.315Amphilophus_citrinellus
ENSSSCG00000013629SMARCA48985.714ENSAOCG00000019167smarca4a10086.147Amphiprion_ocellaris
ENSSSCG00000013629SMARCA49486.925ENSAOCG00000009450-9787.484Amphiprion_ocellaris
ENSSSCG00000013629SMARCA48985.783ENSAPEG00000015559smarca4a10086.216Amphiprion_percula
ENSSSCG00000013629SMARCA410083.215ENSAPEG00000023108-9983.166Amphiprion_percula
ENSSSCG00000013629SMARCA49983.717ENSATEG00000001094-9589.855Anabas_testudineus
ENSSSCG00000013629SMARCA410087.165ENSATEG00000011524smarca4a10087.538Anabas_testudineus
ENSSSCG00000013629SMARCA49999.441ENSANAG00000036991SMARCA410096.303Aotus_nancymaae
ENSSSCG00000013629SMARCA49584.072ENSACLG00000008638-9883.250Astatotilapia_calliptera
ENSSSCG00000013629SMARCA49788.671ENSACLG00000000163smarca4a9888.265Astatotilapia_calliptera
ENSSSCG00000013629SMARCA49487.289ENSAMXG00000011238-9887.273Astyanax_mexicanus
ENSSSCG00000013629SMARCA410098.949ENSBTAG00000019220SMARCA410098.949Bos_taurus
ENSSSCG00000013629SMARCA410095.950ENSCJAG00000005936SMARCA410095.950Callithrix_jacchus
ENSSSCG00000013629SMARCA410099.567ENSCAFG00000017584SMARCA410099.567Canis_familiaris
ENSSSCG00000013629SMARCA410099.567ENSCAFG00020024620SMARCA49999.567Canis_lupus_dingo
ENSSSCG00000013629SMARCA410094.506ENSCHIG00000015318SMARCA410094.506Capra_hircus
ENSSSCG00000013629SMARCA410099.259ENSTSYG00000012966SMARCA410099.259Carlito_syrichta
ENSSSCG00000013629SMARCA49488.852ENSCAPG00000015932SMARCA49694.902Cavia_aperea
ENSSSCG00000013629SMARCA410098.825ENSCPOG00000015549SMARCA410098.825Cavia_porcellus
ENSSSCG00000013629SMARCA410095.756ENSCCAG00000031660SMARCA49995.756Cebus_capucinus
ENSSSCG00000013629SMARCA410099.691ENSCATG00000029530SMARCA410099.691Cercocebus_atys
ENSSSCG00000013629SMARCA410098.454ENSCLAG00000011946SMARCA410098.454Chinchilla_lanigera
ENSSSCG00000013629SMARCA410097.155ENSCPBG00000009994SMARCA410097.155Chrysemys_picta_bellii
ENSSSCG00000013629SMARCA410099.567ENSCANG00000036013SMARCA410099.567Colobus_angolensis_palliatus
ENSSSCG00000013629SMARCA410099.011ENSCGRG00001016732Smarca410099.011Cricetulus_griseus_chok1gshd
ENSSSCG00000013629SMARCA410099.011ENSCGRG00000017242Smarca410099.011Cricetulus_griseus_crigri
ENSSSCG00000013629SMARCA49686.885ENSCSEG00000014771smarca4a10087.287Cynoglossus_semilaevis
ENSSSCG00000013629SMARCA49786.850ENSCVAG00000006979smarca4a9986.675Cyprinodon_variegatus
ENSSSCG00000013629SMARCA49984.375ENSCVAG00000003018-9884.750Cyprinodon_variegatus
ENSSSCG00000013629SMARCA49284.040ENSDARG00000104339SMARCA49584.888Danio_rerio
ENSSSCG00000013629SMARCA410087.067ENSDARG00000077226smarca4a10087.310Danio_rerio
ENSSSCG00000013629SMARCA410090.116ENSDNOG00000048847SMARCA49398.841Dasypus_novemcinctus
ENSSSCG00000013629SMARCA48492.710ENSDORG00000002544Smarca49192.710Dipodomys_ordii
ENSSSCG00000013629SMARCA49486.959ENSETEG00000013361SMARCA49486.959Echinops_telfairi
ENSSSCG00000013629SMARCA410099.258ENSEASG00005006167SMARCA410097.273Equus_asinus_asinus
ENSSSCG00000013629SMARCA410099.320ENSECAG00000008334SMARCA410099.320Equus_caballus
ENSSSCG00000013629SMARCA410086.421ENSELUG00000010247smarca4a10084.852Esox_lucius
ENSSSCG00000013629SMARCA49977.389ENSELUG00000023232-9386.096Esox_lucius
ENSSSCG00000013629SMARCA410099.753ENSFCAG00000004894SMARCA410099.753Felis_catus
ENSSSCG00000013629SMARCA47497.571ENSFALG00000004208SMARCA49391.867Ficedula_albicollis
ENSSSCG00000013629SMARCA49298.785ENSFDAG00000012237SMARCA49798.785Fukomys_damarensis
ENSSSCG00000013629SMARCA410084.355ENSFHEG00000007902-9884.913Fundulus_heteroclitus
ENSSSCG00000013629SMARCA49686.324ENSFHEG00000010182smarca4a10086.606Fundulus_heteroclitus
ENSSSCG00000013629SMARCA49280.687ENSGMOG00000005756-8779.553Gadus_morhua
ENSSSCG00000013629SMARCA49380.303ENSGMOG00000002649smarca4a8781.882Gadus_morhua
ENSSSCG00000013629SMARCA47397.039ENSGALG00000047145SMARCA410097.039Gallus_gallus
ENSSSCG00000013629SMARCA49088.858ENSGAFG00000014900smarca4a9988.482Gambusia_affinis
ENSSSCG00000013629SMARCA49981.898ENSGAFG00000008827-9882.125Gambusia_affinis
ENSSSCG00000013629SMARCA49885.821ENSGACG00000006691smarca4a10085.671Gasterosteus_aculeatus
ENSSSCG00000013629SMARCA49980.711ENSGACG00000016033-9978.503Gasterosteus_aculeatus
ENSSSCG00000013629SMARCA410097.093ENSGAGG00000016757SMARCA410097.093Gopherus_agassizii
ENSSSCG00000013629SMARCA410099.691ENSGGOG00000009882SMARCA410099.691Gorilla_gorilla
ENSSSCG00000013629SMARCA410087.591ENSHBUG00000021172smarca4a10087.713Haplochromis_burtoni
ENSSSCG00000013629SMARCA410083.981ENSHBUG00000005447-9983.294Haplochromis_burtoni
ENSSSCG00000013629SMARCA410098.951ENSHGLG00000010519SMARCA410098.951Heterocephalus_glaber_female
ENSSSCG00000013629SMARCA410097.715ENSHGLG00100013774SMARCA410097.715Heterocephalus_glaber_male
ENSSSCG00000013629SMARCA49586.436ENSHCOG00000009510smarca4a9686.957Hippocampus_comes
ENSSSCG00000013629SMARCA49884.731ENSIPUG00000016346-9884.115Ictalurus_punctatus
ENSSSCG00000013629SMARCA410087.849ENSIPUG00000006107smarca4a10087.849Ictalurus_punctatus
ENSSSCG00000013629SMARCA410099.505ENSSTOG00000007939SMARCA410099.505Ictidomys_tridecemlineatus
ENSSSCG00000013629SMARCA410097.273ENSJJAG00000012877Smarca410097.273Jaculus_jaculus
ENSSSCG00000013629SMARCA410086.089ENSKMAG00000011931smarca4a10086.577Kryptolebias_marmoratus
ENSSSCG00000013629SMARCA410082.986ENSKMAG00000019518-9887.500Kryptolebias_marmoratus
ENSSSCG00000013629SMARCA47782.919ENSLBEG00000020655-8176.847Labrus_bergylta
ENSSSCG00000013629SMARCA49585.872ENSLBEG00000017383smarca4a7789.127Labrus_bergylta
ENSSSCG00000013629SMARCA45288.902ENSLACG00000015309SMARCA410088.397Latimeria_chalumnae
ENSSSCG00000013629SMARCA410087.916ENSLOCG00000007820smarca4a7992.447Lepisosteus_oculatus
ENSSSCG00000013629SMARCA410099.814ENSLAFG00000001433SMARCA410099.814Loxodonta_africana
ENSSSCG00000013629SMARCA410099.691ENSMFAG00000032146SMARCA49999.691Macaca_fascicularis
ENSSSCG00000013629SMARCA410099.691ENSMMUG00000012042SMARCA410099.691Macaca_mulatta
ENSSSCG00000013629SMARCA410099.443ENSMNEG00000028512SMARCA410099.443Macaca_nemestrina
ENSSSCG00000013629SMARCA410099.814ENSMLEG00000034976SMARCA410099.814Mandrillus_leucophaeus
ENSSSCG00000013629SMARCA410087.242ENSMAMG00000009256smarca4a10087.424Mastacembelus_armatus
ENSSSCG00000013629SMARCA49586.931ENSMAMG00000002841-9887.086Mastacembelus_armatus
ENSSSCG00000013629SMARCA49486.211ENSMZEG00005023861-9883.950Maylandia_zebra
ENSSSCG00000013629SMARCA410087.599ENSMZEG00005003889smarca4a10087.477Maylandia_zebra
ENSSSCG00000013629SMARCA410099.072ENSMAUG00000020731Smarca410099.072Mesocricetus_auratus
ENSSSCG00000013629SMARCA410099.753ENSMICG00000009806SMARCA410099.753Microcebus_murinus
ENSSSCG00000013629SMARCA410099.134ENSMOCG00000022209Smarca410099.134Microtus_ochrogaster
ENSSSCG00000013629SMARCA49585.413ENSMMOG00000007571smarca4a9885.879Mola_mola
ENSSSCG00000013629SMARCA410096.725ENSMODG00000006287SMARCA410096.725Monodelphis_domestica
ENSSSCG00000013629SMARCA49687.003ENSMALG00000003388smarca4a10087.097Monopterus_albus
ENSSSCG00000013629SMARCA48983.702ENSMALG00000021534-8390.571Monopterus_albus
ENSSSCG00000013629SMARCA410099.072MGP_CAROLIEiJ_G0031879Smarca410099.072Mus_caroli
ENSSSCG00000013629SMARCA410099.258ENSMUSG00000032187Smarca410099.258Mus_musculus
ENSSSCG00000013629SMARCA410098.578MGP_PahariEiJ_G0014745Smarca410098.578Mus_pahari
ENSSSCG00000013629SMARCA410099.072MGP_SPRETEiJ_G0033003Smarca410099.072Mus_spretus
ENSSSCG00000013629SMARCA410099.567ENSMPUG00000005711SMARCA410099.567Mustela_putorius_furo
ENSSSCG00000013629SMARCA410099.443ENSMLUG00000004491-10099.443Myotis_lucifugus
ENSSSCG00000013629SMARCA410098.516ENSNGAG00000021852Smarca410098.516Nannospalax_galili
ENSSSCG00000013629SMARCA49586.308ENSNBRG00000011457smarca4a9686.149Neolamprologus_brichardi
ENSSSCG00000013629SMARCA410093.449ENSNLEG00000012389SMARCA49893.449Nomascus_leucogenys
ENSSSCG00000013629SMARCA48093.103ENSOPRG00000000885-7893.676Ochotona_princeps
ENSSSCG00000013629SMARCA410095.767ENSODEG00000017127SMARCA410095.767Octodon_degus
ENSSSCG00000013629SMARCA410088.286ENSONIG00000008196smarca4a10088.485Oreochromis_niloticus
ENSSSCG00000013629SMARCA410084.041ENSONIG00000018040-10083.353Oreochromis_niloticus
ENSSSCG00000013629SMARCA49991.112ENSOCUG00000001787SMARCA49991.112Oryctolagus_cuniculus
ENSSSCG00000013629SMARCA49686.048ENSORLG00000015452smarca4a10085.636Oryzias_latipes
ENSSSCG00000013629SMARCA49583.511ENSORLG00000003955-9787.478Oryzias_latipes
ENSSSCG00000013629SMARCA410085.688ENSORLG00020004611smarca4a10085.619Oryzias_latipes_hni
ENSSSCG00000013629SMARCA49583.521ENSORLG00020009728-9787.662Oryzias_latipes_hni
ENSSSCG00000013629SMARCA49983.152ENSORLG00015007739-9982.578Oryzias_latipes_hsok
ENSSSCG00000013629SMARCA410085.810ENSORLG00015016560smarca4a10085.758Oryzias_latipes_hsok
ENSSSCG00000013629SMARCA410086.463ENSOMEG00000007486smarca4a10086.845Oryzias_melastigma
ENSSSCG00000013629SMARCA49683.478ENSOMEG00000016626-9983.701Oryzias_melastigma
ENSSSCG00000013629SMARCA48997.443ENSOGAG00000016148SMARCA410097.443Otolemur_garnettii
ENSSSCG00000013629SMARCA410097.899ENSOARG00000017454SMARCA410097.899Ovis_aries
ENSSSCG00000013629SMARCA410099.691ENSPPAG00000043191SMARCA410099.691Pan_paniscus
ENSSSCG00000013629SMARCA410099.753ENSPPRG00000000064SMARCA410099.753Panthera_pardus
ENSSSCG00000013629SMARCA410099.691ENSPTRG00000010488SMARCA410099.691Pan_troglodytes
ENSSSCG00000013629SMARCA410099.567ENSPANG00000011042SMARCA49999.567Papio_anubis
ENSSSCG00000013629SMARCA410088.046ENSPKIG00000007770SMARCA410088.350Paramormyrops_kingsleyae
ENSSSCG00000013629SMARCA49886.429ENSPKIG00000010087-9887.179Paramormyrops_kingsleyae
ENSSSCG00000013629SMARCA410090.375ENSPSIG00000005547SMARCA410089.891Pelodiscus_sinensis
ENSSSCG00000013629SMARCA410099.258ENSPEMG00000020389Smarca410099.258Peromyscus_maniculatus_bairdii
ENSSSCG00000013629SMARCA410098.639ENSPCIG00000017138SMARCA410098.639Phascolarctos_cinereus
ENSSSCG00000013629SMARCA410083.790ENSPFOG00000012930-9983.710Poecilia_formosa
ENSSSCG00000013629SMARCA410085.385ENSPFOG00000007892smarca4a10086.642Poecilia_formosa
ENSSSCG00000013629SMARCA410083.272ENSPLAG00000014294smarca4a10086.703Poecilia_latipinna
ENSSSCG00000013629SMARCA48290.023ENSPLAG00000018616-8190.473Poecilia_latipinna
ENSSSCG00000013629SMARCA49586.343ENSPMEG00000003725smarca4a9787.476Poecilia_mexicana
ENSSSCG00000013629SMARCA49984.688ENSPMEG00000008929-9884.875Poecilia_mexicana
ENSSSCG00000013629SMARCA49486.907ENSPREG00000014823-9784.375Poecilia_reticulata
ENSSSCG00000013629SMARCA49785.470ENSPREG00000014608smarca4a10086.457Poecilia_reticulata
ENSSSCG00000013629SMARCA410097.636ENSPPYG00000009568SMARCA410097.636Pongo_abelii
ENSSSCG00000013629SMARCA47999.338ENSPCAG00000014054SMARCA47799.338Procavia_capensis
ENSSSCG00000013629SMARCA410099.629ENSPCOG00000023011SMARCA410099.629Propithecus_coquereli
ENSSSCG00000013629SMARCA49599.247ENSPVAG00000007787SMARCA49699.247Pteropus_vampyrus
ENSSSCG00000013629SMARCA49786.439ENSPNYG00000000717smarca4a9688.100Pundamilia_nyererei
ENSSSCG00000013629SMARCA49586.812ENSPNAG00000006636-9786.748Pygocentrus_nattereri
ENSSSCG00000013629SMARCA410099.011ENSRNOG00000009271Smarca410099.011Rattus_norvegicus
ENSSSCG00000013629SMARCA410099.505ENSRBIG00000038696SMARCA49999.505Rhinopithecus_bieti
ENSSSCG00000013629SMARCA410099.567ENSRROG00000045509SMARCA410099.567Rhinopithecus_roxellana
ENSSSCG00000013629SMARCA410099.258ENSSBOG00000026896SMARCA49999.442Saimiri_boliviensis_boliviensis
ENSSSCG00000013629SMARCA410098.454ENSSHAG00000001642SMARCA410098.454Sarcophilus_harrisii
ENSSSCG00000013629SMARCA410088.478ENSSFOG00015013823smarca410087.576Scleropages_formosus
ENSSSCG00000013629SMARCA49681.112ENSSFOG00015009921-9190.812Scleropages_formosus
ENSSSCG00000013629SMARCA410085.714ENSSMAG00000003200smarca4a10085.654Scophthalmus_maximus
ENSSSCG00000013629SMARCA410081.964ENSSMAG00000014082-9981.878Scophthalmus_maximus
ENSSSCG00000013629SMARCA49986.190ENSSDUG00000005388-9587.051Seriola_dumerili
ENSSSCG00000013629SMARCA410083.630ENSSDUG00000017298smarca4a10084.027Seriola_dumerili
ENSSSCG00000013629SMARCA410086.739ENSSLDG00000024486smarca4a10086.703Seriola_lalandi_dorsalis
ENSSSCG00000013629SMARCA49587.321ENSSLDG00000023663-9787.727Seriola_lalandi_dorsalis
ENSSSCG00000013629SMARCA464100.000ENSSARG00000013477SMARCA482100.000Sorex_araneus
ENSSSCG00000013629SMARCA49592.358ENSSPUG00000004558SMARCA49892.303Sphenodon_punctatus
ENSSSCG00000013629SMARCA410086.257ENSSPAG00000004248smarca4a10085.969Stegastes_partitus
ENSSSCG00000013629SMARCA410083.609ENSSPAG00000012533-9983.156Stegastes_partitus
ENSSSCG00000013629SMARCA45290.403ENSTGUG00000015488-9990.403Taeniopygia_guttata
ENSSSCG00000013629SMARCA49581.669ENSTRUG00000001378SMARCA49883.218Takifugu_rubripes
ENSSSCG00000013629SMARCA48981.454ENSTRUG00000004885smarca4a10081.399Takifugu_rubripes
ENSSSCG00000013629SMARCA410082.224ENSTNIG00000004536SMARCA410083.668Tetraodon_nigroviridis
ENSSSCG00000013629SMARCA47384.211ENSTNIG00000004859-10084.211Tetraodon_nigroviridis
ENSSSCG00000013629SMARCA410095.939ENSTTRG00000009519SMARCA410095.939Tursiops_truncatus
ENSSSCG00000013629SMARCA410099.629ENSUAMG00000014661SMARCA410099.629Ursus_americanus
ENSSSCG00000013629SMARCA410097.403ENSUMAG00000022005SMARCA49999.178Ursus_maritimus
ENSSSCG00000013629SMARCA410099.567ENSVVUG00000017820SMARCA49799.567Vulpes_vulpes
ENSSSCG00000013629SMARCA410086.424ENSXETG00000009355smarca49987.390Xenopus_tropicalis
ENSSSCG00000013629SMARCA410086.594ENSXMAG00000006321smarca4a10086.792Xiphophorus_maculatus
ENSSSCG00000013629SMARCA410084.381ENSXMAG00000007030-9983.931Xiphophorus_maculatus

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