EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013656 (Gene tree)
Gene ID: 100511369
Gene Symbol: MRPL4
Alias: CGI-28
Full Name: mitochondrial ribosomal protein L4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 22662 bases
Position: chr2:69063674-69086335
Accession: 100511369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000014519	Ribosomal_L4	PF00573.22	4.2e-54	1	1
ENSSSCP00000052934	Ribosomal_L4	PF00573.22	5e-54	1	1
ENSSSCP00000050437	Ribosomal_L4	PF00573.22	1.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014920	MRPL4-202	1883	-	ENSSSCP00000014519	277 (aa)	-	F1S3J8
ENSSSCT00000051847	MRPL4-203	5186	XM_003123221	ENSSSCP00000052934	294 (aa)	XP_003123269	A0A287B9C4
ENSSSCT00000052018	MRPL4-201	1878	XM_005654855	ENSSSCP00000050437	272 (aa)	XP_005654912	A0A287B2W3

Gene Model

Click here to download ENSSSCG00000013656's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013656	MRPL4	100	84.477	ENSG00000105364	MRPL4	100	92.437	Homo_sapiens
ENSSSCG00000013656	MRPL4	90	70.683	ENSAPOG00000010156	mrpl4	82	70.683	Acanthochromis_polyacanthus
ENSSSCG00000013656	MRPL4	100	87.755	ENSAMEG00000011808	MRPL4	100	87.755	Ailuropoda_melanoleuca
ENSSSCG00000013656	MRPL4	89	69.512	ENSACIG00000011523	mrpl4	90	76.724	Amphilophus_citrinellus
ENSSSCG00000013656	MRPL4	99	66.300	ENSAOCG00000018507	mrpl4	83	66.300	Amphiprion_ocellaris
ENSSSCG00000013656	MRPL4	99	66.300	ENSAPEG00000006208	mrpl4	89	66.300	Amphiprion_percula
ENSSSCG00000013656	MRPL4	90	69.880	ENSATEG00000021694	mrpl4	82	69.880	Anabas_testudineus
ENSSSCG00000013656	MRPL4	99	66.549	ENSACAG00000008232	MRPL4	98	66.552	Anolis_carolinensis
ENSSSCG00000013656	MRPL4	100	83.333	ENSANAG00000025428	MRPL4	100	83.333	Aotus_nancymaae
ENSSSCG00000013656	MRPL4	90	70.683	ENSACLG00000017038	mrpl4	82	70.683	Astatotilapia_calliptera
ENSSSCG00000013656	MRPL4	90	71.371	ENSAMXG00000002236	mrpl4	82	71.371	Astyanax_mexicanus
ENSSSCG00000013656	MRPL4	92	43.969	WBGene00020717	mrpl-4	85	43.969	Caenorhabditis_elegans
ENSSSCG00000013656	MRPL4	100	81.633	ENSCJAG00000005764	MRPL4	100	81.633	Callithrix_jacchus
ENSSSCG00000013656	MRPL4	100	87.365	ENSCAFG00000017881	MRPL4	100	87.075	Canis_familiaris
ENSSSCG00000013656	MRPL4	100	87.365	ENSCAFG00020024405	MRPL4	96	87.153	Canis_lupus_dingo
ENSSSCG00000013656	MRPL4	100	92.058	ENSCHIG00000000516	MRPL4	100	91.837	Capra_hircus
ENSSSCG00000013656	MRPL4	100	87.004	ENSTSYG00000034805	MRPL4	100	86.395	Carlito_syrichta
ENSSSCG00000013656	MRPL4	73	87.129	ENSCAPG00000000036	MRPL4	100	87.129	Cavia_aperea
ENSSSCG00000013656	MRPL4	100	83.513	ENSCPOG00000006506	MRPL4	100	83.446	Cavia_porcellus
ENSSSCG00000013656	MRPL4	100	65.306	ENSCCAG00000036054	MRPL4	100	65.306	Cebus_capucinus
ENSSSCG00000013656	MRPL4	100	85.374	ENSCLAG00000004552	MRPL4	100	85.374	Chinchilla_lanigera
ENSSSCG00000013656	MRPL4	100	83.446	ENSCSAG00000007362	MRPL4	100	83.446	Chlorocebus_sabaeus
ENSSSCG00000013656	MRPL4	99	68.864	ENSCPBG00000005432	MRPL4	99	72.691	Chrysemys_picta_bellii
ENSSSCG00000013656	MRPL4	94	37.838	ENSCING00000003144	-	82	37.838	Ciona_intestinalis
ENSSSCG00000013656	MRPL4	99	36.727	ENSCSAVG00000007005	-	88	36.727	Ciona_savignyi
ENSSSCG00000013656	MRPL4	91	64.372	ENSCANG00000033167	MRPL4	65	64.372	Colobus_angolensis_palliatus
ENSSSCG00000013656	MRPL4	100	80.866	ENSCGRG00001013642	Mrpl4	100	79.592	Cricetulus_griseus_chok1gshd
ENSSSCG00000013656	MRPL4	100	80.866	ENSCGRG00000012922	Mrpl4	100	79.592	Cricetulus_griseus_crigri
ENSSSCG00000013656	MRPL4	90	67.871	ENSCSEG00000020580	mrpl4	82	67.871	Cynoglossus_semilaevis
ENSSSCG00000013656	MRPL4	56	69.079	ENSCVAG00000017296	mrpl4	82	69.032	Cyprinodon_variegatus
ENSSSCG00000013656	MRPL4	90	70.281	ENSDARG00000058824	mrpl4	84	69.565	Danio_rerio
ENSSSCG00000013656	MRPL4	100	71.480	ENSDNOG00000010139	-	100	70.408	Dasypus_novemcinctus
ENSSSCG00000013656	MRPL4	100	77.891	ENSDNOG00000044263	-	100	77.891	Dasypus_novemcinctus
ENSSSCG00000013656	MRPL4	91	87.352	ENSDORG00000003723	Mrpl4	99	87.352	Dipodomys_ordii
ENSSSCG00000013656	MRPL4	92	51.661	FBgn0001995	mRpL4	90	51.661	Drosophila_melanogaster
ENSSSCG00000013656	MRPL4	99	81.379	ENSETEG00000002009	MRPL4	97	81.724	Echinops_telfairi
ENSSSCG00000013656	MRPL4	99	63.768	ENSEBUG00000016597	mrpl4	88	63.768	Eptatretus_burgeri
ENSSSCG00000013656	MRPL4	100	87.726	ENSEASG00005010556	MRPL4	98	87.075	Equus_asinus_asinus
ENSSSCG00000013656	MRPL4	100	87.726	ENSECAG00000017013	MRPL4	98	87.075	Equus_caballus
ENSSSCG00000013656	MRPL4	99	62.799	ENSEEUG00000012011	MRPL4	96	62.925	Erinaceus_europaeus
ENSSSCG00000013656	MRPL4	90	67.470	ENSELUG00000010463	mrpl4	89	63.370	Esox_lucius
ENSSSCG00000013656	MRPL4	91	87.854	ENSFCAG00000043071	MRPL4	95	87.854	Felis_catus
ENSSSCG00000013656	MRPL4	82	85.398	ENSFDAG00000001936	MRPL4	100	85.398	Fukomys_damarensis
ENSSSCG00000013656	MRPL4	90	73.896	ENSFHEG00000003126	mrpl4	82	73.896	Fundulus_heteroclitus
ENSSSCG00000013656	MRPL4	95	61.429	ENSGMOG00000007229	mrpl4	97	61.429	Gadus_morhua
ENSSSCG00000013656	MRPL4	90	69.880	ENSGAFG00000018136	mrpl4	82	69.880	Gambusia_affinis
ENSSSCG00000013656	MRPL4	89	67.886	ENSGACG00000019808	mrpl4	82	67.871	Gasterosteus_aculeatus
ENSSSCG00000013656	MRPL4	97	72.388	ENSGAGG00000018010	MRPL4	100	66.667	Gopherus_agassizii
ENSSSCG00000013656	MRPL4	100	83.673	ENSGGOG00000036529	-	95	83.673	Gorilla_gorilla
ENSSSCG00000013656	MRPL4	90	70.683	ENSHBUG00000006332	mrpl4	82	70.683	Haplochromis_burtoni
ENSSSCG00000013656	MRPL4	100	83.513	ENSHGLG00000007839	MRPL4	100	82.770	Heterocephalus_glaber_female
ENSSSCG00000013656	MRPL4	100	80.272	ENSHGLG00100002720	MRPL4	100	80.272	Heterocephalus_glaber_male
ENSSSCG00000013656	MRPL4	90	64.516	ENSHCOG00000002016	mrpl4	84	64.659	Hippocampus_comes
ENSSSCG00000013656	MRPL4	95	69.202	ENSIPUG00000011705	mrpl4	88	67.143	Ictalurus_punctatus
ENSSSCG00000013656	MRPL4	62	91.329	ENSSTOG00000030121	MRPL4	87	91.329	Ictidomys_tridecemlineatus
ENSSSCG00000013656	MRPL4	100	80.144	ENSJJAG00000010573	Mrpl4	100	79.252	Jaculus_jaculus
ENSSSCG00000013656	MRPL4	90	70.683	ENSKMAG00000012769	mrpl4	81	70.683	Kryptolebias_marmoratus
ENSSSCG00000013656	MRPL4	90	71.486	ENSLBEG00000000848	mrpl4	82	71.486	Labrus_bergylta
ENSSSCG00000013656	MRPL4	97	69.403	ENSLACG00000009255	MRPL4	80	69.403	Latimeria_chalumnae
ENSSSCG00000013656	MRPL4	98	64.014	ENSLOCG00000016632	mrpl4	95	64.014	Lepisosteus_oculatus
ENSSSCG00000013656	MRPL4	100	83.394	ENSLAFG00000015366	MRPL4	100	83.333	Loxodonta_africana
ENSSSCG00000013656	MRPL4	100	83.446	ENSMFAG00000003526	MRPL4	95	83.446	Macaca_fascicularis
ENSSSCG00000013656	MRPL4	100	83.446	ENSMMUG00000001219	MRPL4	100	83.446	Macaca_mulatta
ENSSSCG00000013656	MRPL4	100	83.108	ENSMNEG00000040746	MRPL4	100	83.108	Macaca_nemestrina
ENSSSCG00000013656	MRPL4	100	73.090	ENSMLEG00000041712	MRPL4	100	73.090	Mandrillus_leucophaeus
ENSSSCG00000013656	MRPL4	89	67.886	ENSMAMG00000001736	mrpl4	82	67.871	Mastacembelus_armatus
ENSSSCG00000013656	MRPL4	90	70.683	ENSMZEG00005005809	mrpl4	82	70.683	Maylandia_zebra
ENSSSCG00000013656	MRPL4	100	82.671	ENSMAUG00000013451	Mrpl4	100	80.612	Mesocricetus_auratus
ENSSSCG00000013656	MRPL4	100	84.615	ENSMICG00000010267	MRPL4	100	84.615	Microcebus_murinus
ENSSSCG00000013656	MRPL4	100	83.394	ENSMOCG00000014755	Mrpl4	100	81.973	Microtus_ochrogaster
ENSSSCG00000013656	MRPL4	90	60.081	ENSMMOG00000013673	mrpl4	82	74.775	Mola_mola
ENSSSCG00000013656	MRPL4	90	84.739	ENSMODG00000005476	MRPL4	97	74.747	Monodelphis_domestica
ENSSSCG00000013656	MRPL4	90	71.084	ENSMALG00000002391	mrpl4	80	71.084	Monopterus_albus
ENSSSCG00000013656	MRPL4	100	81.588	MGP_CAROLIEiJ_G0031854	Mrpl4	100	80.612	Mus_caroli
ENSSSCG00000013656	MRPL4	100	81.227	ENSMUSG00000003299	Mrpl4	100	79.592	Mus_musculus
ENSSSCG00000013656	MRPL4	100	81.588	MGP_PahariEiJ_G0014720	Mrpl4	100	80.272	Mus_pahari
ENSSSCG00000013656	MRPL4	100	81.588	MGP_SPRETEiJ_G0032978	Mrpl4	100	80.272	Mus_spretus
ENSSSCG00000013656	MRPL4	100	88.095	ENSMPUG00000006825	MRPL4	100	88.095	Mustela_putorius_furo
ENSSSCG00000013656	MRPL4	91	90.514	ENSMLUG00000012280	MRPL4	98	90.514	Myotis_lucifugus
ENSSSCG00000013656	MRPL4	100	78.339	ENSNGAG00000014705	Mrpl4	100	77.211	Nannospalax_galili
ENSSSCG00000013656	MRPL4	90	71.486	ENSNBRG00000004804	mrpl4	82	71.486	Neolamprologus_brichardi
ENSSSCG00000013656	MRPL4	100	48.173	ENSNLEG00000012155	-	98	52.511	Nomascus_leucogenys
ENSSSCG00000013656	MRPL4	90	69.170	ENSMEUG00000002199	MRPL4	97	69.170	Notamacropus_eugenii
ENSSSCG00000013656	MRPL4	100	80.287	ENSOPRG00000005735	MRPL4	99	78.716	Ochotona_princeps
ENSSSCG00000013656	MRPL4	100	80.952	ENSODEG00000016194	MRPL4	100	80.952	Octodon_degus
ENSSSCG00000013656	MRPL4	90	70.281	ENSONIG00000000136	mrpl4	82	70.281	Oreochromis_niloticus
ENSSSCG00000013656	MRPL4	75	78.469	ENSOANG00000013891	MRPL4	100	78.469	Ornithorhynchus_anatinus
ENSSSCG00000013656	MRPL4	54	82.192	ENSOCUG00000029187	-	98	79.618	Oryctolagus_cuniculus
ENSSSCG00000013656	MRPL4	89	69.512	ENSORLG00000000085	mrpl4	79	69.478	Oryzias_latipes
ENSSSCG00000013656	MRPL4	89	69.512	ENSORLG00020020476	mrpl4	82	69.478	Oryzias_latipes_hni
ENSSSCG00000013656	MRPL4	89	69.512	ENSORLG00015020892	mrpl4	82	69.478	Oryzias_latipes_hsok
ENSSSCG00000013656	MRPL4	99	85.507	ENSOGAG00000011051	MRPL4	99	84.983	Otolemur_garnettii
ENSSSCG00000013656	MRPL4	100	89.170	ENSOARG00000015602	MRPL4	100	89.116	Ovis_aries
ENSSSCG00000013656	MRPL4	100	85.034	ENSPPAG00000041740	-	95	85.034	Pan_paniscus
ENSSSCG00000013656	MRPL4	91	87.449	ENSPPRG00000004312	MRPL4	97	87.449	Panthera_pardus
ENSSSCG00000013656	MRPL4	91	87.449	ENSPTIG00000010912	MRPL4	95	87.449	Panthera_tigris_altaica
ENSSSCG00000013656	MRPL4	100	84.694	ENSPTRG00000010462	MRPL4	95	84.694	Pan_troglodytes
ENSSSCG00000013656	MRPL4	100	83.784	ENSPANG00000001265	MRPL4	95	83.784	Papio_anubis
ENSSSCG00000013656	MRPL4	100	59.740	ENSPKIG00000008086	mrpl4	100	59.740	Paramormyrops_kingsleyae
ENSSSCG00000013656	MRPL4	90	70.968	ENSPMGG00000002329	mrpl4	86	70.968	Periophthalmus_magnuspinnatus
ENSSSCG00000013656	MRPL4	100	83.032	ENSPEMG00000017474	Mrpl4	100	81.973	Peromyscus_maniculatus_bairdii
ENSSSCG00000013656	MRPL4	92	69.531	ENSPMAG00000007691	mrpl4	99	69.531	Petromyzon_marinus
ENSSSCG00000013656	MRPL4	90	69.076	ENSPFOG00000013329	mrpl4	82	69.076	Poecilia_formosa
ENSSSCG00000013656	MRPL4	90	69.076	ENSPLAG00000012864	mrpl4	82	69.076	Poecilia_latipinna
ENSSSCG00000013656	MRPL4	90	69.076	ENSPMEG00000004937	mrpl4	82	69.076	Poecilia_mexicana
ENSSSCG00000013656	MRPL4	93	66.667	ENSPREG00000021621	mrpl4	88	69.076	Poecilia_reticulata
ENSSSCG00000013656	MRPL4	100	84.014	ENSPPYG00000009547	MRPL4	95	84.014	Pongo_abelii
ENSSSCG00000013656	MRPL4	90	75.510	ENSPCAG00000002385	MRPL4	99	75.510	Procavia_capensis
ENSSSCG00000013656	MRPL4	99	81.229	ENSPCOG00000016733	MRPL4	99	81.229	Propithecus_coquereli
ENSSSCG00000013656	MRPL4	100	70.068	ENSPVAG00000003681	MRPL4	95	70.068	Pteropus_vampyrus
ENSSSCG00000013656	MRPL4	90	70.683	ENSPNYG00000023505	mrpl4	85	70.683	Pundamilia_nyererei
ENSSSCG00000013656	MRPL4	90	72.691	ENSPNAG00000011785	mrpl4	73	72.691	Pygocentrus_nattereri
ENSSSCG00000013656	MRPL4	100	81.949	ENSRNOG00000020659	Mrpl4	100	80.612	Rattus_norvegicus
ENSSSCG00000013656	MRPL4	73	87.129	ENSRBIG00000032283	-	93	87.129	Rhinopithecus_bieti
ENSSSCG00000013656	MRPL4	100	84.354	ENSRROG00000003982	MRPL4	100	84.354	Rhinopithecus_roxellana
ENSSSCG00000013656	MRPL4	100	82.653	ENSSBOG00000020666	MRPL4	100	82.653	Saimiri_boliviensis_boliviensis
ENSSSCG00000013656	MRPL4	95	80.451	ENSSHAG00000008539	MRPL4	89	80.451	Sarcophilus_harrisii
ENSSSCG00000013656	MRPL4	90	73.494	ENSSFOG00015003308	mrpl4	82	73.494	Scleropages_formosus
ENSSSCG00000013656	MRPL4	89	65.587	ENSSMAG00000021118	mrpl4	82	65.600	Scophthalmus_maximus
ENSSSCG00000013656	MRPL4	90	71.084	ENSSDUG00000002078	mrpl4	82	71.084	Seriola_dumerili
ENSSSCG00000013656	MRPL4	90	71.084	ENSSLDG00000015083	mrpl4	82	71.084	Seriola_lalandi_dorsalis
ENSSSCG00000013656	MRPL4	90	71.888	ENSSPAG00000010120	mrpl4	82	71.888	Stegastes_partitus
ENSSSCG00000013656	MRPL4	90	67.871	ENSTRUG00000008532	mrpl4	85	75.893	Takifugu_rubripes
ENSSSCG00000013656	MRPL4	90	69.355	ENSTNIG00000003265	mrpl4	82	69.478	Tetraodon_nigroviridis
ENSSSCG00000013656	MRPL4	90	79.268	ENSTBEG00000006336	MRPL4	100	79.268	Tupaia_belangeri
ENSSSCG00000013656	MRPL4	100	88.776	ENSTTRG00000009532	MRPL4	95	88.776	Tursiops_truncatus
ENSSSCG00000013656	MRPL4	97	84.211	ENSUAMG00000020392	MRPL4	87	84.211	Ursus_americanus
ENSSSCG00000013656	MRPL4	100	88.809	ENSUMAG00000025105	MRPL4	100	88.776	Ursus_maritimus
ENSSSCG00000013656	MRPL4	99	61.775	ENSVPAG00000006123	MRPL4	96	61.905	Vicugna_pacos
ENSSSCG00000013656	MRPL4	100	87.726	ENSVVUG00000028961	MRPL4	100	87.415	Vulpes_vulpes
ENSSSCG00000013656	MRPL4	90	67.871	ENSXETG00000022060	mrpl4	83	67.871	Xenopus_tropicalis
ENSSSCG00000013656	MRPL4	90	66.932	ENSXCOG00000011438	mrpl4	82	66.932	Xiphophorus_couchianus
ENSSSCG00000013656	MRPL4	90	69.478	ENSXMAG00000030102	mrpl4	85	67.331	Xiphophorus_maculatus