EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013737 (Gene tree)
Gene ID: 100523170
Gene Symbol: RNASEH2A
Alias: AGS4|RNASEHI|RNHIA|RNHL
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 13154 bases
Position: chr2:66195323-66208476
Accession: 100523170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000014606	RNase_HII	PF01351.18	4.3e-51	1	1
ENSSSCP00000041485	RNase_HII	PF01351.18	4.3e-51	1	1
ENSSSCP00000054441	RNase_HII	PF01351.18	4.3e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000054730	RNASEH2A-201	4227	-	ENSSSCP00000041485	301 (aa)	-	F1SDX8
ENSSSCT00000051464	RNASEH2A-202	2098	XM_005652860	ENSSSCP00000054441	301 (aa)	XP_005652917	F1SDX8
ENSSSCT00000015011	RNASEH2A-203	1794	-	ENSSSCP00000014606	301 (aa)	-	F1SDX8

Gene Model

Click here to download ENSSSCG00000013737's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013737	RNASEH2A	100	87.043	ENSG00000104889	RNASEH2A	99	92.857	Homo_sapiens
ENSSSCG00000013737	RNASEH2A	100	60.065	ENSAPOG00000004101	rnaseh2a	100	60.065	Acanthochromis_polyacanthus
ENSSSCG00000013737	RNASEH2A	100	91.362	ENSAMEG00000012323	RNASEH2A	100	91.362	Ailuropoda_melanoleuca
ENSSSCG00000013737	RNASEH2A	85	65.490	ENSACIG00000002658	rnaseh2a	100	65.490	Amphilophus_citrinellus
ENSSSCG00000013737	RNASEH2A	100	59.416	ENSAOCG00000009217	rnaseh2a	100	59.416	Amphiprion_ocellaris
ENSSSCG00000013737	RNASEH2A	100	59.416	ENSAPEG00000022937	rnaseh2a	100	59.416	Amphiprion_percula
ENSSSCG00000013737	RNASEH2A	100	59.416	ENSATEG00000000908	rnaseh2a	100	59.416	Anabas_testudineus
ENSSSCG00000013737	RNASEH2A	100	63.245	ENSACAG00000003338	RNASEH2A	100	63.245	Anolis_carolinensis
ENSSSCG00000013737	RNASEH2A	100	65.686	ENSANAG00000037932	RNASEH2A	100	65.686	Aotus_nancymaae
ENSSSCG00000013737	RNASEH2A	100	59.740	ENSACLG00000009169	rnaseh2a	100	59.740	Astatotilapia_calliptera
ENSSSCG00000013737	RNASEH2A	100	53.642	ENSAMXG00000000436	rnaseh2a	100	53.642	Astyanax_mexicanus
ENSSSCG00000013737	RNASEH2A	100	92.027	ENSBTAG00000009661	RNASEH2A	100	92.027	Bos_taurus
ENSSSCG00000013737	RNASEH2A	91	48.561	WBGene00004383	rnh-2	93	48.561	Caenorhabditis_elegans
ENSSSCG00000013737	RNASEH2A	100	86.711	ENSCJAG00000004873	RNASEH2A	100	86.711	Callithrix_jacchus
ENSSSCG00000013737	RNASEH2A	100	90.698	ENSCAFG00000017159	RNASEH2A	100	90.698	Canis_familiaris
ENSSSCG00000013737	RNASEH2A	100	90.698	ENSCAFG00020005190	RNASEH2A	60	90.698	Canis_lupus_dingo
ENSSSCG00000013737	RNASEH2A	100	92.691	ENSCHIG00000014460	RNASEH2A	100	92.691	Capra_hircus
ENSSSCG00000013737	RNASEH2A	100	88.411	ENSTSYG00000025418	RNASEH2A	100	88.411	Carlito_syrichta
ENSSSCG00000013737	RNASEH2A	64	79.381	ENSCAPG00000003411	RNASEH2A	100	79.381	Cavia_aperea
ENSSSCG00000013737	RNASEH2A	100	84.158	ENSCPOG00000038877	RNASEH2A	100	84.158	Cavia_porcellus
ENSSSCG00000013737	RNASEH2A	100	87.375	ENSCCAG00000030453	RNASEH2A	100	87.375	Cebus_capucinus
ENSSSCG00000013737	RNASEH2A	100	86.379	ENSCATG00000029609	RNASEH2A	100	86.379	Cercocebus_atys
ENSSSCG00000013737	RNASEH2A	100	86.424	ENSCLAG00000014930	RNASEH2A	100	86.424	Chinchilla_lanigera
ENSSSCG00000013737	RNASEH2A	100	86.047	ENSCSAG00000006567	RNASEH2A	100	86.047	Chlorocebus_sabaeus
ENSSSCG00000013737	RNASEH2A	100	62.458	ENSCPBG00000023909	RNASEH2A	100	62.458	Chrysemys_picta_bellii
ENSSSCG00000013737	RNASEH2A	100	50.498	ENSCING00000006190	-	100	50.498	Ciona_intestinalis
ENSSSCG00000013737	RNASEH2A	100	51.163	ENSCSAVG00000010904	-	100	51.163	Ciona_savignyi
ENSSSCG00000013737	RNASEH2A	100	86.093	ENSCANG00000027433	RNASEH2A	100	86.093	Colobus_angolensis_palliatus
ENSSSCG00000013737	RNASEH2A	100	83.168	ENSCGRG00001005021	Rnaseh2a	100	83.168	Cricetulus_griseus_chok1gshd
ENSSSCG00000013737	RNASEH2A	100	83.168	ENSCGRG00000016602	Rnaseh2a	93	90.196	Cricetulus_griseus_crigri
ENSSSCG00000013737	RNASEH2A	100	61.438	ENSCSEG00000009842	rnaseh2a	100	61.438	Cynoglossus_semilaevis
ENSSSCG00000013737	RNASEH2A	99	54.181	ENSCVAG00000021203	rnaseh2a	99	54.181	Cyprinodon_variegatus
ENSSSCG00000013737	RNASEH2A	100	62.215	ENSDARG00000018891	rnaseh2a	100	62.215	Danio_rerio
ENSSSCG00000013737	RNASEH2A	85	88.372	ENSDNOG00000036532	RNASEH2A	100	88.372	Dasypus_novemcinctus
ENSSSCG00000013737	RNASEH2A	100	83.775	ENSDORG00000009008	Rnaseh2a	100	83.775	Dipodomys_ordii
ENSSSCG00000013737	RNASEH2A	96	49.153	FBgn0031252	CG13690	85	49.153	Drosophila_melanogaster
ENSSSCG00000013737	RNASEH2A	71	75.587	ENSETEG00000001956	-	100	75.587	Echinops_telfairi
ENSSSCG00000013737	RNASEH2A	97	53.512	ENSEBUG00000003380	rnaseh2a	92	53.512	Eptatretus_burgeri
ENSSSCG00000013737	RNASEH2A	86	93.411	ENSEASG00005004118	RNASEH2A	93	93.411	Equus_asinus_asinus
ENSSSCG00000013737	RNASEH2A	100	87.043	ENSECAG00000007013	RNASEH2A	100	87.043	Equus_caballus
ENSSSCG00000013737	RNASEH2A	100	76.744	ENSEEUG00000008222	RNASEH2A	100	76.744	Erinaceus_europaeus
ENSSSCG00000013737	RNASEH2A	99	60.596	ENSELUG00000023079	rnaseh2a	96	62.500	Esox_lucius
ENSSSCG00000013737	RNASEH2A	100	90.033	ENSFCAG00000000474	RNASEH2A	100	90.033	Felis_catus
ENSSSCG00000013737	RNASEH2A	100	86.424	ENSFDAG00000003595	RNASEH2A	96	91.633	Fukomys_damarensis
ENSSSCG00000013737	RNASEH2A	100	59.804	ENSFHEG00000007682	rnaseh2a	100	59.804	Fundulus_heteroclitus
ENSSSCG00000013737	RNASEH2A	100	57.792	ENSGMOG00000005650	rnaseh2a	100	57.792	Gadus_morhua
ENSSSCG00000013737	RNASEH2A	100	60.396	ENSGALG00000052002	RNASEH2A	73	60.396	Gallus_gallus
ENSSSCG00000013737	RNASEH2A	100	59.804	ENSGAFG00000009624	rnaseh2a	100	59.804	Gambusia_affinis
ENSSSCG00000013737	RNASEH2A	100	58.824	ENSGACG00000016019	rnaseh2a	100	58.824	Gasterosteus_aculeatus
ENSSSCG00000013737	RNASEH2A	100	61.589	ENSGAGG00000013859	RNASEH2A	100	61.589	Gopherus_agassizii
ENSSSCG00000013737	RNASEH2A	100	87.375	ENSGGOG00000005846	RNASEH2A	100	87.375	Gorilla_gorilla
ENSSSCG00000013737	RNASEH2A	92	61.922	ENSHBUG00000005267	rnaseh2a	97	61.922	Haplochromis_burtoni
ENSSSCG00000013737	RNASEH2A	100	86.424	ENSHGLG00000018801	RNASEH2A	100	86.424	Heterocephalus_glaber_female
ENSSSCG00000013737	RNASEH2A	100	86.755	ENSHGLG00100015773	RNASEH2A	100	86.755	Heterocephalus_glaber_male
ENSSSCG00000013737	RNASEH2A	100	60.131	ENSHCOG00000016593	rnaseh2a	100	60.131	Hippocampus_comes
ENSSSCG00000013737	RNASEH2A	100	62.541	ENSIPUG00000024299	rnaseh2a	100	62.541	Ictalurus_punctatus
ENSSSCG00000013737	RNASEH2A	100	84.385	ENSSTOG00000006224	RNASEH2A	99	89.804	Ictidomys_tridecemlineatus
ENSSSCG00000013737	RNASEH2A	100	82.060	ENSJJAG00000017547	Rnaseh2a	100	82.060	Jaculus_jaculus
ENSSSCG00000013737	RNASEH2A	100	60.458	ENSKMAG00000019829	rnaseh2a	100	60.458	Kryptolebias_marmoratus
ENSSSCG00000013737	RNASEH2A	100	60.194	ENSLBEG00000020494	rnaseh2a	100	60.194	Labrus_bergylta
ENSSSCG00000013737	RNASEH2A	85	60.392	ENSLACG00000007789	RNASEH2A	99	60.392	Latimeria_chalumnae
ENSSSCG00000013737	RNASEH2A	100	62.745	ENSLOCG00000007890	rnaseh2a	99	62.745	Lepisosteus_oculatus
ENSSSCG00000013737	RNASEH2A	100	88.742	ENSLAFG00000015571	RNASEH2A	100	88.742	Loxodonta_africana
ENSSSCG00000013737	RNASEH2A	100	86.379	ENSMFAG00000002011	RNASEH2A	100	86.379	Macaca_fascicularis
ENSSSCG00000013737	RNASEH2A	100	86.047	ENSMMUG00000005690	RNASEH2A	100	86.047	Macaca_mulatta
ENSSSCG00000013737	RNASEH2A	100	86.379	ENSMNEG00000033054	RNASEH2A	100	86.379	Macaca_nemestrina
ENSSSCG00000013737	RNASEH2A	100	86.379	ENSMLEG00000043654	RNASEH2A	100	86.379	Mandrillus_leucophaeus
ENSSSCG00000013737	RNASEH2A	100	61.165	ENSMAMG00000003062	rnaseh2a	99	62.456	Mastacembelus_armatus
ENSSSCG00000013737	RNASEH2A	100	59.091	ENSMZEG00005023857	rnaseh2a	100	59.091	Maylandia_zebra
ENSSSCG00000013737	RNASEH2A	54	78.659	ENSMAUG00000021740	-	100	78.659	Mesocricetus_auratus
ENSSSCG00000013737	RNASEH2A	100	89.404	ENSMICG00000016430	RNASEH2A	100	89.404	Microcebus_murinus
ENSSSCG00000013737	RNASEH2A	100	84.818	ENSMOCG00000017408	Rnaseh2a	100	84.818	Microtus_ochrogaster
ENSSSCG00000013737	RNASEH2A	85	63.922	ENSMMOG00000008447	rnaseh2a	100	63.922	Mola_mola
ENSSSCG00000013737	RNASEH2A	100	66.343	ENSMODG00000006997	RNASEH2A	100	66.343	Monodelphis_domestica
ENSSSCG00000013737	RNASEH2A	100	61.688	ENSMALG00000021607	rnaseh2a	100	62.745	Monopterus_albus
ENSSSCG00000013737	RNASEH2A	100	92.086	MGP_CAROLIEiJ_G0031319	-	100	98.148	Mus_caroli
ENSSSCG00000013737	RNASEH2A	100	85.479	ENSMUSG00000052926	Rnaseh2a	100	98.148	Mus_musculus
ENSSSCG00000013737	RNASEH2A	100	85.479	MGP_PahariEiJ_G0022924	Rnaseh2a	100	98.148	Mus_pahari
ENSSSCG00000013737	RNASEH2A	100	85.809	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	98.148	Mus_spretus
ENSSSCG00000013737	RNASEH2A	100	89.701	ENSMPUG00000004586	RNASEH2A	100	89.701	Mustela_putorius_furo
ENSSSCG00000013737	RNASEH2A	100	91.362	ENSMLUG00000012723	RNASEH2A	100	91.362	Myotis_lucifugus
ENSSSCG00000013737	RNASEH2A	100	82.781	ENSNGAG00000017988	Rnaseh2a	100	82.781	Nannospalax_galili
ENSSSCG00000013737	RNASEH2A	100	59.740	ENSNBRG00000018731	rnaseh2a	100	59.740	Neolamprologus_brichardi
ENSSSCG00000013737	RNASEH2A	100	87.375	ENSNLEG00000012806	RNASEH2A	100	87.375	Nomascus_leucogenys
ENSSSCG00000013737	RNASEH2A	71	74.178	ENSMEUG00000006001	RNASEH2A	100	74.178	Notamacropus_eugenii
ENSSSCG00000013737	RNASEH2A	100	70.764	ENSOPRG00000004811	RNASEH2A	100	70.764	Ochotona_princeps
ENSSSCG00000013737	RNASEH2A	100	86.093	ENSODEG00000009772	RNASEH2A	100	86.093	Octodon_degus
ENSSSCG00000013737	RNASEH2A	100	59.091	ENSONIG00000018033	rnaseh2a	99	59.091	Oreochromis_niloticus
ENSSSCG00000013737	RNASEH2A	100	60.197	ENSOANG00000009079	RNASEH2A	100	60.197	Ornithorhynchus_anatinus
ENSSSCG00000013737	RNASEH2A	100	59.477	ENSORLG00000004042	rnaseh2a	100	59.477	Oryzias_latipes
ENSSSCG00000013737	RNASEH2A	100	59.804	ENSORLG00020009483	rnaseh2a	100	59.804	Oryzias_latipes_hni
ENSSSCG00000013737	RNASEH2A	100	59.477	ENSORLG00015007548	rnaseh2a	100	59.477	Oryzias_latipes_hsok
ENSSSCG00000013737	RNASEH2A	100	58.497	ENSOMEG00000016454	rnaseh2a	97	65.737	Oryzias_melastigma
ENSSSCG00000013737	RNASEH2A	100	85.099	ENSOGAG00000012214	RNASEH2A	100	85.099	Otolemur_garnettii
ENSSSCG00000013737	RNASEH2A	100	92.691	ENSOARG00000010721	RNASEH2A	100	92.691	Ovis_aries
ENSSSCG00000013737	RNASEH2A	100	87.375	ENSPPAG00000028092	RNASEH2A	100	87.375	Pan_paniscus
ENSSSCG00000013737	RNASEH2A	100	90.365	ENSPPRG00000010585	RNASEH2A	100	90.365	Panthera_pardus
ENSSSCG00000013737	RNASEH2A	100	89.369	ENSPTIG00000013366	RNASEH2A	100	89.369	Panthera_tigris_altaica
ENSSSCG00000013737	RNASEH2A	100	87.043	ENSPTRG00000010542	RNASEH2A	100	87.043	Pan_troglodytes
ENSSSCG00000013737	RNASEH2A	100	86.379	ENSPANG00000034495	RNASEH2A	100	86.379	Papio_anubis
ENSSSCG00000013737	RNASEH2A	100	62.092	ENSPKIG00000009756	rnaseh2a	100	62.092	Paramormyrops_kingsleyae
ENSSSCG00000013737	RNASEH2A	65	59.391	ENSPSIG00000012039	RNASEH2A	100	59.391	Pelodiscus_sinensis
ENSSSCG00000013737	RNASEH2A	85	64.706	ENSPMGG00000023392	rnaseh2a	100	64.706	Periophthalmus_magnuspinnatus
ENSSSCG00000013737	RNASEH2A	100	83.882	ENSPEMG00000018009	Rnaseh2a	100	83.882	Peromyscus_maniculatus_bairdii
ENSSSCG00000013737	RNASEH2A	98	60.265	ENSPMAG00000009060	rnaseh2a	98	60.265	Petromyzon_marinus
ENSSSCG00000013737	RNASEH2A	100	65.696	ENSPCIG00000014119	RNASEH2A	100	65.696	Phascolarctos_cinereus
ENSSSCG00000013737	RNASEH2A	100	59.871	ENSPFOG00000012627	rnaseh2a	100	59.871	Poecilia_formosa
ENSSSCG00000013737	RNASEH2A	67	56.039	ENSPLAG00000018723	-	90	56.039	Poecilia_latipinna
ENSSSCG00000013737	RNASEH2A	85	65.882	ENSPLAG00000015901	rnaseh2a	100	65.882	Poecilia_latipinna
ENSSSCG00000013737	RNASEH2A	67	56.522	ENSPMEG00000009032	-	93	56.522	Poecilia_mexicana
ENSSSCG00000013737	RNASEH2A	85	66.275	ENSPMEG00000000647	rnaseh2a	100	66.275	Poecilia_mexicana
ENSSSCG00000013737	RNASEH2A	100	60.596	ENSPREG00000015015	rnaseh2a	100	60.596	Poecilia_reticulata
ENSSSCG00000013737	RNASEH2A	100	86.424	ENSPPYG00000009608	RNASEH2A	100	86.424	Pongo_abelii
ENSSSCG00000013737	RNASEH2A	100	88.704	ENSPCAG00000015319	RNASEH2A	100	88.704	Procavia_capensis
ENSSSCG00000013737	RNASEH2A	100	89.073	ENSPCOG00000003686	RNASEH2A	100	89.073	Propithecus_coquereli
ENSSSCG00000013737	RNASEH2A	100	73.422	ENSPVAG00000014703	RNASEH2A	100	73.422	Pteropus_vampyrus
ENSSSCG00000013737	RNASEH2A	100	55.305	ENSPNYG00000023986	rnaseh2a	100	55.305	Pundamilia_nyererei
ENSSSCG00000013737	RNASEH2A	100	61.438	ENSPNAG00000021017	rnaseh2a	100	61.438	Pygocentrus_nattereri
ENSSSCG00000013737	RNASEH2A	100	84.818	ENSRNOG00000003504	Rnaseh2a	100	84.818	Rattus_norvegicus
ENSSSCG00000013737	RNASEH2A	100	86.755	ENSRBIG00000023554	RNASEH2A	100	86.755	Rhinopithecus_bieti
ENSSSCG00000013737	RNASEH2A	100	86.755	ENSRROG00000043799	RNASEH2A	100	86.755	Rhinopithecus_roxellana
ENSSSCG00000013737	RNASEH2A	80	41.406	YNL072W	RNH201	81	41.406	Saccharomyces_cerevisiae
ENSSSCG00000013737	RNASEH2A	100	88.372	ENSSBOG00000033164	RNASEH2A	100	88.372	Saimiri_boliviensis_boliviensis
ENSSSCG00000013737	RNASEH2A	100	65.595	ENSSHAG00000015552	RNASEH2A	100	65.595	Sarcophilus_harrisii
ENSSSCG00000013737	RNASEH2A	100	62.745	ENSSFOG00015009692	rnaseh2a	100	62.745	Scleropages_formosus
ENSSSCG00000013737	RNASEH2A	100	59.740	ENSSMAG00000013986	rnaseh2a	99	61.111	Scophthalmus_maximus
ENSSSCG00000013737	RNASEH2A	92	61.210	ENSSDUG00000005280	rnaseh2a	96	61.210	Seriola_dumerili
ENSSSCG00000013737	RNASEH2A	100	58.766	ENSSLDG00000023766	rnaseh2a	100	58.766	Seriola_lalandi_dorsalis
ENSSSCG00000013737	RNASEH2A	100	58.766	ENSSPAG00000012769	rnaseh2a	100	58.766	Stegastes_partitus
ENSSSCG00000013737	RNASEH2A	100	56.774	ENSTRUG00000000049	rnaseh2a	100	57.097	Takifugu_rubripes
ENSSSCG00000013737	RNASEH2A	100	59.223	ENSTNIG00000004533	rnaseh2a	99	59.223	Tetraodon_nigroviridis
ENSSSCG00000013737	RNASEH2A	71	95.775	ENSTTRG00000003592	RNASEH2A	100	95.775	Tursiops_truncatus
ENSSSCG00000013737	RNASEH2A	100	91.030	ENSUAMG00000019593	RNASEH2A	99	92.857	Ursus_americanus
ENSSSCG00000013737	RNASEH2A	77	93.966	ENSUMAG00000006254	-	73	93.966	Ursus_maritimus
ENSSSCG00000013737	RNASEH2A	98	61.409	ENSXETG00000004762	rnaseh2a	98	61.409	Xenopus_tropicalis
ENSSSCG00000013737	RNASEH2A	100	59.871	ENSXCOG00000013485	rnaseh2a	99	62.857	Xiphophorus_couchianus
ENSSSCG00000013737	RNASEH2A	100	59.804	ENSXMAG00000006953	rnaseh2a	100	59.804	Xiphophorus_maculatus