EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013860 (Gene tree)
Gene ID: 100738028
Gene Symbol: CHERP
Alias: DAN16|ERPROT213-21
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 20441 bases
Position: chr2:61062980-61083420
Accession: 100738028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000014734	Surp	PF01805.20	8.1e-16	1	1
ENSSSCP00000041345	Surp	PF01805.20	8.1e-16	1	1
ENSSSCP00000014734	G-patch	PF01585.23	6.5e-12	1	1
ENSSSCP00000041345	G-patch	PF01585.23	6.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000015139	CHERP-201	4142	XM_021083581	ENSSSCP00000014734	916 (aa)	XP_020939240	F1S9W3
ENSSSCT00000062511	CHERP-202	4017	-	ENSSSCP00000041345	916 (aa)	-	F1S9W3

Gene Model

Click here to download ENSSSCG00000013860's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013860	CHERP	100	97.926	ENSG00000085872	CHERP	100	97.926	Homo_sapiens
ENSSSCG00000013860	CHERP	60	62.124	ENSAPOG00000009646	cherp	96	63.441	Acanthochromis_polyacanthus
ENSSSCG00000013860	CHERP	99	89.157	ENSAMEG00000010048	CHERP	79	94.360	Ailuropoda_melanoleuca
ENSSSCG00000013860	CHERP	80	67.020	ENSACIG00000019242	cherp	80	67.463	Amphilophus_citrinellus
ENSSSCG00000013860	CHERP	99	66.453	ENSAOCG00000017846	cherp	78	67.423	Amphiprion_ocellaris
ENSSSCG00000013860	CHERP	99	65.455	ENSAPEG00000021128	cherp	78	67.513	Amphiprion_percula
ENSSSCG00000013860	CHERP	99	65.203	ENSATEG00000006341	cherp	98	66.488	Anabas_testudineus
ENSSSCG00000013860	CHERP	77	84.767	ENSAPLG00000010773	CHERP	99	84.787	Anas_platyrhynchos
ENSSSCG00000013860	CHERP	50	82.600	ENSACAG00000011583	CHERP	61	85.616	Anolis_carolinensis
ENSSSCG00000013860	CHERP	100	96.764	ENSANAG00000024284	CHERP	100	96.764	Aotus_nancymaae
ENSSSCG00000013860	CHERP	99	66.310	ENSACLG00000020053	cherp	79	67.020	Astatotilapia_calliptera
ENSSSCG00000013860	CHERP	99	68.288	ENSAMXG00000021637	cherp	93	68.460	Astyanax_mexicanus
ENSSSCG00000013860	CHERP	100	97.926	ENSBTAG00000005289	CHERP	100	97.926	Bos_taurus
ENSSSCG00000013860	CHERP	100	96.872	ENSCJAG00000040462	CHERP	100	96.872	Callithrix_jacchus
ENSSSCG00000013860	CHERP	100	98.799	ENSCAFG00000015671	CHERP	100	98.799	Canis_familiaris
ENSSSCG00000013860	CHERP	100	97.627	ENSCAFG00020009941	CHERP	100	97.627	Canis_lupus_dingo
ENSSSCG00000013860	CHERP	95	97.895	ENSCHIG00000013765	CHERP	100	97.895	Capra_hircus
ENSSSCG00000013860	CHERP	93	91.715	ENSCAPG00000000910	CHERP	76	90.219	Cavia_aperea
ENSSSCG00000013860	CHERP	99	95.874	ENSCPOG00000019949	CHERP	99	95.874	Cavia_porcellus
ENSSSCG00000013860	CHERP	100	96.872	ENSCCAG00000031534	CHERP	100	96.872	Cebus_capucinus
ENSSSCG00000013860	CHERP	100	96.767	ENSCATG00000031409	CHERP	100	96.767	Cercocebus_atys
ENSSSCG00000013860	CHERP	93	94.296	ENSCLAG00000005484	CHERP	98	94.296	Chinchilla_lanigera
ENSSSCG00000013860	CHERP	100	98.144	ENSCSAG00000005740	CHERP	100	98.144	Chlorocebus_sabaeus
ENSSSCG00000013860	CHERP	100	85.854	ENSCPBG00000014970	CHERP	79	86.066	Chrysemys_picta_bellii
ENSSSCG00000013860	CHERP	70	54.949	ENSCING00000004814	-	53	71.277	Ciona_intestinalis
ENSSSCG00000013860	CHERP	100	98.035	ENSCANG00000032053	CHERP	100	98.035	Colobus_angolensis_palliatus
ENSSSCG00000013860	CHERP	99	95.264	ENSCGRG00001023316	Cherp	99	95.264	Cricetulus_griseus_chok1gshd
ENSSSCG00000013860	CHERP	99	96.280	ENSCGRG00000015901	Cherp	99	96.171	Cricetulus_griseus_crigri
ENSSSCG00000013860	CHERP	80	67.411	ENSCSEG00000019700	cherp	78	67.331	Cynoglossus_semilaevis
ENSSSCG00000013860	CHERP	77	66.574	ENSCVAG00000003622	cherp	97	62.891	Cyprinodon_variegatus
ENSSSCG00000013860	CHERP	99	67.822	ENSDARG00000021812	cherp	100	75.954	Danio_rerio
ENSSSCG00000013860	CHERP	99	92.249	ENSDORG00000027623	Cherp	100	92.140	Dipodomys_ordii
ENSSSCG00000013860	CHERP	63	63.235	FBgn0261872	scaf6	55	62.687	Drosophila_melanogaster
ENSSSCG00000013860	CHERP	83	96.875	ENSETEG00000019543	CHERP	83	96.875	Echinops_telfairi
ENSSSCG00000013860	CHERP	100	98.472	ENSEASG00005000428	CHERP	92	98.472	Equus_asinus_asinus
ENSSSCG00000013860	CHERP	100	98.362	ENSECAG00000012713	CHERP	100	98.362	Equus_caballus
ENSSSCG00000013860	CHERP	80	68.170	ENSELUG00000023026	cherp	79	68.358	Esox_lucius
ENSSSCG00000013860	CHERP	100	97.417	ENSFCAG00000013172	CHERP	100	97.417	Felis_catus
ENSSSCG00000013860	CHERP	80	86.296	ENSFALG00000013410	CHERP	68	85.929	Ficedula_albicollis
ENSSSCG00000013860	CHERP	79	83.740	ENSFDAG00000015981	CHERP	80	81.600	Fukomys_damarensis
ENSSSCG00000013860	CHERP	99	60.967	ENSFHEG00000009720	cherp	79	60.512	Fundulus_heteroclitus
ENSSSCG00000013860	CHERP	79	65.818	ENSGMOG00000008654	cherp	79	67.429	Gadus_morhua
ENSSSCG00000013860	CHERP	80	85.967	ENSGALG00000003824	CHERP	88	84.532	Gallus_gallus
ENSSSCG00000013860	CHERP	99	63.270	ENSGACG00000002053	cherp	98	61.789	Gasterosteus_aculeatus
ENSSSCG00000013860	CHERP	100	85.419	ENSGAGG00000014208	CHERP	79	85.929	Gopherus_agassizii
ENSSSCG00000013860	CHERP	56	94.275	ENSGGOG00000016348	CHERP	96	85.422	Gorilla_gorilla
ENSSSCG00000013860	CHERP	99	66.274	ENSHBUG00000007405	cherp	79	66.623	Haplochromis_burtoni
ENSSSCG00000013860	CHERP	99	95.295	ENSHGLG00000002993	CHERP	99	95.415	Heterocephalus_glaber_female
ENSSSCG00000013860	CHERP	59	82.367	ENSHGLG00100010390	CHERP	68	81.206	Heterocephalus_glaber_male
ENSSSCG00000013860	CHERP	80	66.888	ENSHCOG00000007691	cherp	78	65.223	Hippocampus_comes
ENSSSCG00000013860	CHERP	99	68.636	ENSIPUG00000025008	cherp	99	68.966	Ictalurus_punctatus
ENSSSCG00000013860	CHERP	99	98.232	ENSSTOG00000012089	CHERP	99	98.232	Ictidomys_tridecemlineatus
ENSSSCG00000013860	CHERP	99	89.825	ENSJJAG00000017982	Cherp	81	96.717	Jaculus_jaculus
ENSSSCG00000013860	CHERP	80	66.093	ENSKMAG00000009101	cherp	78	65.646	Kryptolebias_marmoratus
ENSSSCG00000013860	CHERP	79	66.443	ENSLBEG00000007586	cherp	91	66.489	Labrus_bergylta
ENSSSCG00000013860	CHERP	99	80.618	ENSLACG00000018221	CHERP	79	79.470	Latimeria_chalumnae
ENSSSCG00000013860	CHERP	99	75.884	ENSLOCG00000003654	cherp	78	74.168	Lepisosteus_oculatus
ENSSSCG00000013860	CHERP	99	94.754	ENSLAFG00000009096	CHERP	100	94.645	Loxodonta_africana
ENSSSCG00000013860	CHERP	100	96.872	ENSMFAG00000033267	CHERP	100	96.872	Macaca_fascicularis
ENSSSCG00000013860	CHERP	100	93.096	ENSMMUG00000012958	CHERP	82	96.226	Macaca_mulatta
ENSSSCG00000013860	CHERP	100	96.872	ENSMNEG00000004125	CHERP	100	96.872	Macaca_nemestrina
ENSSSCG00000013860	CHERP	94	99.107	ENSMLEG00000044337	CHERP	100	94.545	Mandrillus_leucophaeus
ENSSSCG00000013860	CHERP	80	67.510	ENSMAMG00000022269	cherp	78	68.048	Mastacembelus_armatus
ENSSSCG00000013860	CHERP	99	66.453	ENSMZEG00005018014	cherp	79	66.887	Maylandia_zebra
ENSSSCG00000013860	CHERP	69	85.984	ENSMGAG00000005571	CHERP	93	85.819	Meleagris_gallopavo
ENSSSCG00000013860	CHERP	99	94.606	ENSMAUG00000015856	Cherp	99	94.930	Mesocricetus_auratus
ENSSSCG00000013860	CHERP	100	96.187	ENSMICG00000004577	CHERP	100	96.187	Microcebus_murinus
ENSSSCG00000013860	CHERP	99	95.847	ENSMOCG00000014697	Cherp	99	96.393	Microtus_ochrogaster
ENSSSCG00000013860	CHERP	99	67.132	ENSMMOG00000008525	cherp	76	66.846	Mola_mola
ENSSSCG00000013860	CHERP	99	91.453	ENSMODG00000014938	CHERP	100	91.346	Monodelphis_domestica
ENSSSCG00000013860	CHERP	80	67.733	ENSMALG00000020688	cherp	79	66.275	Monopterus_albus
ENSSSCG00000013860	CHERP	99	94.794	MGP_CAROLIEiJ_G0031220	Cherp	99	95.119	Mus_caroli
ENSSSCG00000013860	CHERP	99	93.081	ENSMUSG00000052488	Cherp	99	93.189	Mus_musculus
ENSSSCG00000013860	CHERP	99	94.754	MGP_PahariEiJ_G0021685	Cherp	99	95.301	Mus_pahari
ENSSSCG00000013860	CHERP	99	94.783	MGP_SPRETEiJ_G0032341	Cherp	99	95.109	Mus_spretus
ENSSSCG00000013860	CHERP	100	97.519	ENSMPUG00000016023	CHERP	98	97.519	Mustela_putorius_furo
ENSSSCG00000013860	CHERP	80	91.984	ENSMLUG00000013881	CHERP	80	91.962	Myotis_lucifugus
ENSSSCG00000013860	CHERP	100	92.704	ENSNGAG00000023323	Cherp	100	92.704	Nannospalax_galili
ENSSSCG00000013860	CHERP	80	66.270	ENSNBRG00000001914	cherp	81	66.446	Neolamprologus_brichardi
ENSSSCG00000013860	CHERP	100	98.144	ENSNLEG00000005536	CHERP	100	98.144	Nomascus_leucogenys
ENSSSCG00000013860	CHERP	91	94.270	ENSMEUG00000010840	CHERP	91	95.564	Notamacropus_eugenii
ENSSSCG00000013860	CHERP	79	95.179	ENSODEG00000001528	CHERP	81	95.146	Octodon_degus
ENSSSCG00000013860	CHERP	99	65.499	ENSONIG00000007686	cherp	79	66.490	Oreochromis_niloticus
ENSSSCG00000013860	CHERP	80	66.491	ENSORLG00000000138	cherp	79	67.068	Oryzias_latipes
ENSSSCG00000013860	CHERP	80	66.360	ENSORLG00020013142	cherp	86	74.481	Oryzias_latipes_hni
ENSSSCG00000013860	CHERP	80	66.229	ENSORLG00015008911	cherp	79	66.934	Oryzias_latipes_hsok
ENSSSCG00000013860	CHERP	80	66.229	ENSOMEG00000016947	cherp	99	64.662	Oryzias_melastigma
ENSSSCG00000013860	CHERP	99	96.838	ENSOGAG00000005834	CHERP	99	96.838	Otolemur_garnettii
ENSSSCG00000013860	CHERP	100	88.261	ENSOARG00000018876	CHERP	97	88.261	Ovis_aries
ENSSSCG00000013860	CHERP	100	96.552	ENSPPAG00000029195	CHERP	100	96.552	Pan_paniscus
ENSSSCG00000013860	CHERP	100	97.417	ENSPPRG00000003275	CHERP	100	97.417	Panthera_pardus
ENSSSCG00000013860	CHERP	99	70.252	ENSPTIG00000019778	CHERP	84	74.486	Panthera_tigris_altaica
ENSSSCG00000013860	CHERP	100	97.819	ENSPTRG00000010647	CHERP	100	97.819	Pan_troglodytes
ENSSSCG00000013860	CHERP	100	96.872	ENSPANG00000011698	CHERP	100	96.872	Papio_anubis
ENSSSCG00000013860	CHERP	78	66.713	ENSPKIG00000000423	cherp	79	66.801	Paramormyrops_kingsleyae
ENSSSCG00000013860	CHERP	99	85.512	ENSPSIG00000011974	CHERP	100	85.892	Pelodiscus_sinensis
ENSSSCG00000013860	CHERP	99	62.955	ENSPMGG00000023606	cherp	88	92.405	Periophthalmus_magnuspinnatus
ENSSSCG00000013860	CHERP	99	93.998	ENSPEMG00000011238	Cherp	99	94.319	Peromyscus_maniculatus_bairdii
ENSSSCG00000013860	CHERP	100	91.953	ENSPCIG00000019615	CHERP	95	92.060	Phascolarctos_cinereus
ENSSSCG00000013860	CHERP	99	65.892	ENSPFOG00000016899	cherp	99	64.544	Poecilia_formosa
ENSSSCG00000013860	CHERP	86	64.356	ENSPMEG00000002214	cherp	76	67.576	Poecilia_mexicana
ENSSSCG00000013860	CHERP	99	65.632	ENSPREG00000020774	cherp	99	64.650	Poecilia_reticulata
ENSSSCG00000013860	CHERP	100	92.249	ENSPPYG00000009691	CHERP	100	92.467	Pongo_abelii
ENSSSCG00000013860	CHERP	100	86.026	ENSPCAG00000001337	CHERP	90	96.774	Procavia_capensis
ENSSSCG00000013860	CHERP	66	100.000	ENSPCOG00000022788	CHERP	99	100.000	Propithecus_coquereli
ENSSSCG00000013860	CHERP	100	88.441	ENSPVAG00000004320	CHERP	100	88.441	Pteropus_vampyrus
ENSSSCG00000013860	CHERP	99	65.989	ENSPNYG00000003942	cherp	79	66.490	Pundamilia_nyererei
ENSSSCG00000013860	CHERP	99	67.610	ENSPNAG00000017179	cherp	99	67.715	Pygocentrus_nattereri
ENSSSCG00000013860	CHERP	99	94.794	ENSRNOG00000012323	Cherp	99	95.011	Rattus_norvegicus
ENSSSCG00000013860	CHERP	99	98.140	ENSRBIG00000038621	CHERP	99	98.140	Rhinopithecus_bieti
ENSSSCG00000013860	CHERP	100	96.872	ENSRROG00000040770	CHERP	100	96.872	Rhinopithecus_roxellana
ENSSSCG00000013860	CHERP	100	96.659	ENSSBOG00000014492	CHERP	100	96.659	Saimiri_boliviensis_boliviensis
ENSSSCG00000013860	CHERP	99	91.918	ENSSHAG00000010752	CHERP	99	91.796	Sarcophilus_harrisii
ENSSSCG00000013860	CHERP	99	65.332	ENSSMAG00000005362	cherp	79	65.793	Scophthalmus_maximus
ENSSSCG00000013860	CHERP	99	68.511	ENSSDUG00000019712	cherp	79	69.382	Seriola_dumerili
ENSSSCG00000013860	CHERP	99	68.449	ENSSLDG00000012659	cherp	79	69.525	Seriola_lalandi_dorsalis
ENSSSCG00000013860	CHERP	100	84.674	ENSSPUG00000008901	CHERP	100	84.783	Sphenodon_punctatus
ENSSSCG00000013860	CHERP	99	67.701	ENSSPAG00000010681	cherp	79	65.535	Stegastes_partitus
ENSSSCG00000013860	CHERP	100	87.786	ENSTGUG00000000680	CHERP	100	87.786	Taeniopygia_guttata
ENSSSCG00000013860	CHERP	80	64.660	ENSTRUG00000007429	cherp	88	63.827	Takifugu_rubripes
ENSSSCG00000013860	CHERP	100	64.141	ENSTNIG00000003363	cherp	79	63.316	Tetraodon_nigroviridis
ENSSSCG00000013860	CHERP	89	97.829	ENSTTRG00000015006	CHERP	89	97.829	Tursiops_truncatus
ENSSSCG00000013860	CHERP	100	90.554	ENSUAMG00000017295	CHERP	80	97.335	Ursus_americanus
ENSSSCG00000013860	CHERP	67	89.439	ENSUMAG00000000965	CHERP	70	85.849	Ursus_maritimus
ENSSSCG00000013860	CHERP	100	97.100	ENSVVUG00000016546	CHERP	100	97.100	Vulpes_vulpes
ENSSSCG00000013860	CHERP	56	83.431	ENSXETG00000002072	cherp	97	78.349	Xenopus_tropicalis