EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000014343 (Gene tree)
Gene ID: 100521716
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 52095 bases
Position: chr2:141179564-141231658
Accession: 100521716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035856	RRM_5	PF13893.6	9.5e-07	1	2
ENSSSCP00000035856	RRM_5	PF13893.6	9.5e-07	2	2
ENSSSCP00000032245	RRM_5	PF13893.6	2.3e-06	1	1
ENSSSCP00000015258	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000036409	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000036801	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000044244	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000051567	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000055895	RRM_5	PF13893.6	2.8e-06	1	1
ENSSSCP00000035992	RRM_5	PF13893.6	2.9e-06	1	1
ENSSSCP00000041792	RRM_5	PF13893.6	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000066118	-	3662	XM_005661716	ENSSSCP00000035856	561 (aa)	XP_005661773	A0A286ZW34
ENSSSCT00000040894	-	5976	XM_005661707	ENSSSCP00000041792	864 (aa)	XP_005661764	A0A286ZWJ3
ENSSSCT00000015671	-	3821	XM_013995179	ENSSSCP00000015258	849 (aa)	XP_013850633	F1RGI7
ENSSSCT00000040778	-	4061	-	ENSSSCP00000032245	796 (aa)	-	A0A286ZLA4
ENSSSCT00000058287	-	4243	XM_021084854	ENSSSCP00000036409	849 (aa)	XP_020940513	F1RGI7
ENSSSCT00000052776	-	4097	XM_021084852	ENSSSCP00000051567	849 (aa)	XP_020940511	F1RGI7
ENSSSCT00000061551	-	5313	XM_005661708	ENSSSCP00000035992	864 (aa)	XP_005661765	A0A286ZWJ3
ENSSSCT00000057911	-	5931	-	ENSSSCP00000055895	849 (aa)	-	F1RGI7
ENSSSCT00000048814	-	4783	XM_021084851	ENSSSCP00000044244	849 (aa)	XP_020940510	F1RGI7
ENSSSCT00000040926	-	5059	-	ENSSSCP00000036801	849 (aa)	-	F1RGI7

Gene Model

Click here to download ENSSSCG00000014343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000014343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000014343	-	100	98.744	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSSSCG00000014343	-	99	95.871	ENSAMEG00000011347	-	100	95.871	Ailuropoda_melanoleuca
ENSSSCG00000014343	-	100	79.389	ENSAPLG00000008118	-	100	78.081	Anas_platyrhynchos
ENSSSCG00000014343	-	99	73.333	ENSACAG00000016233	-	99	73.251	Anolis_carolinensis
ENSSSCG00000014343	-	90	72.826	ENSANAG00000024654	-	99	72.826	Aotus_nancymaae
ENSSSCG00000014343	-	100	98.233	ENSANAG00000022951	-	100	98.233	Aotus_nancymaae
ENSSSCG00000014343	-	77	48.148	ENSAMXG00000010681	matr3l1.1	73	48.148	Astyanax_mexicanus
ENSSSCG00000014343	-	84	36.879	ENSAMXG00000010685	matr3l1.1	84	38.095	Astyanax_mexicanus
ENSSSCG00000014343	-	100	93.720	ENSBTAG00000006756	MATR3	99	95.249	Bos_taurus
ENSSSCG00000014343	-	100	97.504	ENSCJAG00000006888	-	100	97.504	Callithrix_jacchus
ENSSSCG00000014343	-	100	99.074	ENSCAFG00000001345	MATR3	100	99.074	Canis_familiaris
ENSSSCG00000014343	-	99	98.826	ENSCAFG00020010504	-	99	98.826	Canis_lupus_dingo
ENSSSCG00000014343	-	100	99.411	ENSCHIG00000025746	-	100	99.411	Capra_hircus
ENSSSCG00000014343	-	100	98.367	ENSTSYG00000011028	-	100	98.367	Carlito_syrichta
ENSSSCG00000014343	-	100	98.351	ENSCPOG00000014076	-	100	98.351	Cavia_porcellus
ENSSSCG00000014343	-	100	98.587	ENSCCAG00000025074	-	100	98.587	Cebus_capucinus
ENSSSCG00000014343	-	100	98.217	ENSCATG00000041304	-	100	98.217	Cercocebus_atys
ENSSSCG00000014343	-	100	98.587	ENSCLAG00000015998	-	100	98.587	Chinchilla_lanigera
ENSSSCG00000014343	-	100	98.940	ENSCSAG00000013075	-	100	98.940	Chlorocebus_sabaeus
ENSSSCG00000014343	-	100	78.313	ENSCPBG00000006303	-	100	78.313	Chrysemys_picta_bellii
ENSSSCG00000014343	-	100	97.527	ENSCANG00000028224	-	100	97.527	Colobus_angolensis_palliatus
ENSSSCG00000014343	-	100	98.822	ENSCGRG00001020227	Matr3	100	98.822	Cricetulus_griseus_chok1gshd
ENSSSCG00000014343	-	100	98.704	ENSCGRG00000011298	Matr3	100	98.704	Cricetulus_griseus_crigri
ENSSSCG00000014343	-	97	32.143	ENSCSEG00000012682	matr3l1.1	93	32.143	Cynoglossus_semilaevis
ENSSSCG00000014343	-	86	39.806	ENSCVAG00000005337	matr3l1.1	90	38.835	Cyprinodon_variegatus
ENSSSCG00000014343	-	100	95.217	ENSDNOG00000037723	-	100	95.217	Dasypus_novemcinctus
ENSSSCG00000014343	-	100	99.529	ENSEASG00005020857	-	100	99.529	Equus_asinus_asinus
ENSSSCG00000014343	-	100	99.411	ENSECAG00000012882	MATR3	100	99.411	Equus_caballus
ENSSSCG00000014343	-	86	42.718	ENSELUG00000021651	si:ch211-271b14.1	96	42.718	Esox_lucius
ENSSSCG00000014343	-	71	49.123	ENSELUG00000021848	matr3l1.1	74	51.515	Esox_lucius
ENSSSCG00000014343	-	100	99.411	ENSFCAG00000021911	-	100	99.411	Felis_catus
ENSSSCG00000014343	-	100	78.579	ENSFALG00000003071	-	100	77.596	Ficedula_albicollis
ENSSSCG00000014343	-	100	97.880	ENSFDAG00000017675	-	100	97.880	Fukomys_damarensis
ENSSSCG00000014343	-	100	79.518	ENSGALG00000002478	MATR3	100	78.204	Gallus_gallus
ENSSSCG00000014343	-	100	78.142	ENSGAGG00000011386	-	100	78.142	Gopherus_agassizii
ENSSSCG00000014343	-	100	98.822	ENSGGOG00000007308	-	100	98.822	Gorilla_gorilla
ENSSSCG00000014343	-	100	99.058	ENSHGLG00000004673	MATR3	100	99.058	Heterocephalus_glaber_female
ENSSSCG00000014343	-	91	98.434	ENSHGLG00100006442	-	100	98.434	Heterocephalus_glaber_male
ENSSSCG00000014343	-	60	49.057	ENSHCOG00000013223	matr3l1.1	83	30.309	Hippocampus_comes
ENSSSCG00000014343	-	100	99.293	ENSSTOG00000014746	-	100	99.293	Ictidomys_tridecemlineatus
ENSSSCG00000014343	-	91	69.006	ENSJJAG00000011022	-	100	68.811	Jaculus_jaculus
ENSSSCG00000014343	-	100	97.409	ENSJJAG00000021710	-	100	97.409	Jaculus_jaculus
ENSSSCG00000014343	-	65	41.489	ENSLBEG00000018267	matr3l1.1	88	35.766	Labrus_bergylta
ENSSSCG00000014343	-	99	57.484	ENSLACG00000006743	-	99	58.134	Latimeria_chalumnae
ENSSSCG00000014343	-	100	98.396	ENSMFAG00000000634	-	100	98.396	Macaca_fascicularis
ENSSSCG00000014343	-	63	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSSSCG00000014343	-	100	99.121	ENSMMUG00000016741	MATR3	100	99.121	Macaca_mulatta
ENSSSCG00000014343	-	100	99.058	ENSMNEG00000042856	-	100	99.058	Macaca_nemestrina
ENSSSCG00000014343	-	100	99.058	ENSMLEG00000041178	-	100	99.058	Mandrillus_leucophaeus
ENSSSCG00000014343	-	74	48.235	ENSMAMG00000013840	matr3l1.1	75	41.880	Mastacembelus_armatus
ENSSSCG00000014343	-	100	79.409	ENSMGAG00000001331	-	100	77.875	Meleagris_gallopavo
ENSSSCG00000014343	-	100	98.469	ENSMAUG00000011647	Matr3	100	98.469	Mesocricetus_auratus
ENSSSCG00000014343	-	95	97.196	ENSMICG00000012438	-	99	97.024	Microcebus_murinus
ENSSSCG00000014343	-	100	98.587	ENSMOCG00000015711	Matr3	100	98.587	Microtus_ochrogaster
ENSSSCG00000014343	-	100	91.335	ENSMODG00000011925	-	99	90.749	Monodelphis_domestica
ENSSSCG00000014343	-	100	98.469	MGP_CAROLIEiJ_G0022108	Matr3	100	98.469	Mus_caroli
ENSSSCG00000014343	-	100	98.469	ENSMUSG00000037236	Matr3	100	98.469	Mus_musculus
ENSSSCG00000014343	-	100	98.469	MGP_PahariEiJ_G0018842	Matr3	100	98.469	Mus_pahari
ENSSSCG00000014343	-	100	98.115	MGP_SPRETEiJ_G0023020	Matr3	100	98.115	Mus_spretus
ENSSSCG00000014343	-	100	99.537	ENSMPUG00000009297	-	100	99.537	Mustela_putorius_furo
ENSSSCG00000014343	-	100	98.237	ENSMLUG00000005798	-	99	98.237	Myotis_lucifugus
ENSSSCG00000014343	-	100	98.704	ENSNGAG00000017452	Matr3	100	98.704	Nannospalax_galili
ENSSSCG00000014343	-	100	99.058	ENSNLEG00000009093	-	100	99.058	Nomascus_leucogenys
ENSSSCG00000014343	-	99	91.329	ENSOPRG00000016511	-	100	90.766	Ochotona_princeps
ENSSSCG00000014343	-	100	98.469	ENSODEG00000003015	-	100	98.469	Octodon_degus
ENSSSCG00000014343	-	100	98.940	ENSOCUG00000026311	MATR3	100	98.940	Oryctolagus_cuniculus
ENSSSCG00000014343	-	70	37.879	ENSORLG00020009362	matr3l1.1	80	38.519	Oryzias_latipes_hni
ENSSSCG00000014343	-	64	48.148	ENSORLG00015018551	matr3l1.1	80	39.130	Oryzias_latipes_hsok
ENSSSCG00000014343	-	67	40.351	ENSOMEG00000022287	matr3l1.1	91	36.429	Oryzias_melastigma
ENSSSCG00000014343	-	100	99.293	ENSOGAG00000010607	-	100	99.293	Otolemur_garnettii
ENSSSCG00000014343	-	100	99.411	ENSOARG00000016931	-	99	99.411	Ovis_aries
ENSSSCG00000014343	-	100	98.217	ENSPPAG00000001418	-	100	98.217	Pan_paniscus
ENSSSCG00000014343	-	100	89.305	ENSPPAG00000026720	-	99	92.896	Pan_paniscus
ENSSSCG00000014343	-	100	99.529	ENSPPRG00000008004	-	100	99.529	Panthera_pardus
ENSSSCG00000014343	-	98	98.367	ENSPTIG00000010711	-	100	99.507	Panthera_tigris_altaica
ENSSSCG00000014343	-	100	98.217	ENSPTRG00000017294	MATR3	100	98.217	Pan_troglodytes
ENSSSCG00000014343	-	100	98.396	ENSPANG00000012018	-	100	98.396	Papio_anubis
ENSSSCG00000014343	-	99	96.953	ENSPANG00000032489	-	99	98.364	Papio_anubis
ENSSSCG00000014343	-	90	41.379	ENSPKIG00000000333	matr3l1.1	74	41.379	Paramormyrops_kingsleyae
ENSSSCG00000014343	-	100	78.228	ENSPSIG00000014598	-	100	78.228	Pelodiscus_sinensis
ENSSSCG00000014343	-	100	98.233	ENSPEMG00000020679	Matr3	100	98.233	Peromyscus_maniculatus_bairdii
ENSSSCG00000014343	-	100	95.429	ENSPPYG00000015835	-	100	95.429	Pongo_abelii
ENSSSCG00000014343	-	100	98.618	ENSPCOG00000025718	-	100	98.618	Propithecus_coquereli
ENSSSCG00000014343	-	98	95.573	ENSPVAG00000015431	-	100	95.573	Pteropus_vampyrus
ENSSSCG00000014343	-	52	46.512	ENSPNYG00000015855	-	86	46.512	Pundamilia_nyererei
ENSSSCG00000014343	-	100	97.998	ENSRNOG00000019875	Matr3	100	97.998	Rattus_norvegicus
ENSSSCG00000014343	-	100	98.396	ENSRBIG00000034713	-	100	98.396	Rhinopithecus_bieti
ENSSSCG00000014343	-	100	97.409	ENSRROG00000043949	-	100	97.409	Rhinopithecus_roxellana
ENSSSCG00000014343	-	100	98.396	ENSRROG00000039415	-	100	98.630	Rhinopithecus_roxellana
ENSSSCG00000014343	-	100	98.492	ENSSBOG00000030159	-	100	98.492	Saimiri_boliviensis_boliviensis
ENSSSCG00000014343	-	100	91.569	ENSSHAG00000010331	-	99	90.984	Sarcophilus_harrisii
ENSSSCG00000014343	-	61	55.556	ENSSDUG00000015369	matr3l1.1	75	51.515	Seriola_dumerili
ENSSSCG00000014343	-	100	77.183	ENSSPUG00000019236	-	100	77.243	Sphenodon_punctatus
ENSSSCG00000014343	-	100	78.118	ENSTGUG00000014568	MATR3	100	77.243	Taeniopygia_guttata
ENSSSCG00000014343	-	51	37.327	ENSTRUG00000001692	-	83	35.317	Takifugu_rubripes
ENSSSCG00000014343	-	61	57.143	ENSTNIG00000003166	matr3l1.1	72	57.143	Tetraodon_nigroviridis
ENSSSCG00000014343	-	90	99.305	ENSUAMG00000000097	-	97	99.305	Ursus_americanus
ENSSSCG00000014343	-	100	98.958	ENSUMAG00000015808	-	100	98.958	Ursus_maritimus
ENSSSCG00000014343	-	100	95.328	ENSVPAG00000006337	-	100	95.328	Vicugna_pacos
ENSSSCG00000014343	-	100	99.293	ENSVVUG00000020287	-	100	99.293	Vulpes_vulpes
ENSSSCG00000014343	-	100	53.629	ENSXETG00000003838	matr3	100	52.438	Xenopus_tropicalis
ENSSSCG00000014343	-	68	34.343	ENSXMAG00000014107	-	71	57.143	Xiphophorus_maculatus