EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000014900 (Gene tree)
Gene ID: 100626412
Gene Symbol: RAB30
Alias: -
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 93938 bases
Position: chr9:17128805-17222742
Accession: 100626412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000015821	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSSSCP00000033224	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000016255	RAB30-202	1722	XM_021062575	ENSSSCP00000015821	203 (aa)	XP_020918234	F2Z5W1
ENSSSCT00000036962	RAB30-201	1715	XM_021062576	ENSSSCP00000033224	203 (aa)	XP_020918235	F2Z5W1

Gene Model

Click here to download ENSSSCG00000014900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000014900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000014900	RAB30	79	41.615	ENSSSCG00000036503	RAB6B	77	41.615
ENSSSCG00000014900	RAB30	81	47.059	ENSSSCG00000020711	RAB33B	74	47.059
ENSSSCG00000014900	RAB30	83	47.929	ENSSSCG00000028655	RAB18	82	47.929
ENSSSCG00000014900	RAB30	82	50.602	ENSSSCG00000008359	RAB1A	83	50.610
ENSSSCG00000014900	RAB30	81	32.530	ENSSSCG00000027443	MRAS	79	32.530
ENSSSCG00000014900	RAB30	77	35.000	ENSSSCG00000017769	RAB34	62	35.000
ENSSSCG00000014900	RAB30	90	39.560	ENSSSCG00000007513	RAB22A	90	39.560
ENSSSCG00000014900	RAB30	80	49.383	ENSSSCG00000006564	-	80	49.383
ENSSSCG00000014900	RAB30	89	40.556	ENSSSCG00000005514	RAB14	84	40.556
ENSSSCG00000014900	RAB30	97	37.981	ENSSSCG00000032312	RAB11A	96	37.981
ENSSSCG00000014900	RAB30	88	39.362	ENSSSCG00000030432	-	84	39.362
ENSSSCG00000014900	RAB30	84	34.503	ENSSSCG00000032477	NRAS	89	34.503
ENSSSCG00000014900	RAB30	79	40.361	ENSSSCG00000032672	RAB9B	82	40.361
ENSSSCG00000014900	RAB30	97	39.524	ENSSSCG00000013600	RAB11B	96	39.524
ENSSSCG00000014900	RAB30	82	50.000	ENSSSCG00000012954	RAB1B	90	50.000
ENSSSCG00000014900	RAB30	74	31.613	ENSSSCG00000011535	-	81	31.613
ENSSSCG00000014900	RAB30	78	38.272	ENSSSCG00000010048	RAB36	61	38.272
ENSSSCG00000014900	RAB30	86	42.529	ENSSSCG00000002280	RAB15	82	42.529
ENSSSCG00000014900	RAB30	95	38.889	ENSSSCG00000012123	RAB9A	97	38.889
ENSSSCG00000014900	RAB30	78	48.447	ENSSSCG00000024233	RAB39B	76	48.447
ENSSSCG00000014900	RAB30	87	32.584	ENSSSCG00000026969	KRAS	93	32.584
ENSSSCG00000014900	RAB30	86	50.286	ENSSSCG00000033876	RAB35	86	50.286
ENSSSCG00000014900	RAB30	87	38.068	ENSSSCG00000029539	RAB23	77	39.623
ENSSSCG00000014900	RAB30	82	31.737	ENSSSCG00000016434	RHEB	88	31.737
ENSSSCG00000014900	RAB30	98	41.232	ENSSSCG00000039186	RAB25	97	41.232
ENSSSCG00000014900	RAB30	91	40.000	ENSSSCG00000032467	RAB5C	83	40.000
ENSSSCG00000014900	RAB30	88	38.043	ENSSSCG00000011615	RAB7A	88	38.043
ENSSSCG00000014900	RAB30	89	34.807	ENSSSCG00000031513	HRAS	92	34.807
ENSSSCG00000014900	RAB30	75	30.921	ENSSSCG00000025041	-	87	30.921
ENSSSCG00000014900	RAB30	81	51.176	ENSSSCG00000012658	RAB33A	62	51.176
ENSSSCG00000014900	RAB30	79	42.857	ENSSSCG00000014828	RAB6A	77	42.857
ENSSSCG00000014900	RAB30	85	44.186	ENSSSCG00000037653	RAB5A	80	44.186
ENSSSCG00000014900	RAB30	90	42.391	ENSSSCG00000006232	RAB2A	83	47.436
ENSSSCG00000014900	RAB30	85	45.930	ENSSSCG00000029544	RAB2B	81	48.718
ENSSSCG00000014900	RAB30	89	47.253	ENSSSCG00000038026	RAB12	74	47.778
ENSSSCG00000014900	RAB30	75	31.013	ENSSSCG00000008577	DNAJC27	89	31.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000014900	RAB30	100	100.000	ENSG00000137502	RAB30	100	100.000	Homo_sapiens
ENSSSCG00000014900	RAB30	100	86.207	ENSAPOG00000022625	rab30	100	86.207	Acanthochromis_polyacanthus
ENSSSCG00000014900	RAB30	100	100.000	ENSAMEG00000005231	RAB30	100	100.000	Ailuropoda_melanoleuca
ENSSSCG00000014900	RAB30	95	86.010	ENSAOCG00000012556	rab30	69	86.010	Amphiprion_ocellaris
ENSSSCG00000014900	RAB30	100	86.207	ENSAPEG00000012044	rab30	100	86.207	Amphiprion_percula
ENSSSCG00000014900	RAB30	100	86.207	ENSATEG00000010475	rab30	100	86.207	Anabas_testudineus
ENSSSCG00000014900	RAB30	100	98.030	ENSACAG00000001098	RAB30	100	98.030	Anolis_carolinensis
ENSSSCG00000014900	RAB30	100	100.000	ENSANAG00000029292	RAB30	100	100.000	Aotus_nancymaae
ENSSSCG00000014900	RAB30	100	86.700	ENSACLG00000023526	rab30	100	86.700	Astatotilapia_calliptera
ENSSSCG00000014900	RAB30	100	85.222	ENSAMXG00000009935	rab30	82	85.222	Astyanax_mexicanus
ENSSSCG00000014900	RAB30	100	100.000	ENSBTAG00000002417	RAB30	100	100.000	Bos_taurus
ENSSSCG00000014900	RAB30	85	63.218	WBGene00004282	rab-30	81	63.218	Caenorhabditis_elegans
ENSSSCG00000014900	RAB30	100	100.000	ENSCJAG00000041773	RAB30	100	100.000	Callithrix_jacchus
ENSSSCG00000014900	RAB30	100	100.000	ENSCAFG00000004616	RAB30	100	100.000	Canis_familiaris
ENSSSCG00000014900	RAB30	100	100.000	ENSCAFG00020017865	RAB30	100	100.000	Canis_lupus_dingo
ENSSSCG00000014900	RAB30	100	100.000	ENSCHIG00000020601	RAB30	100	100.000	Capra_hircus
ENSSSCG00000014900	RAB30	100	100.000	ENSTSYG00000009392	RAB30	100	100.000	Carlito_syrichta
ENSSSCG00000014900	RAB30	100	100.000	ENSCAPG00000009331	RAB30	100	100.000	Cavia_aperea
ENSSSCG00000014900	RAB30	100	100.000	ENSCPOG00000005047	RAB30	100	100.000	Cavia_porcellus
ENSSSCG00000014900	RAB30	100	100.000	ENSCCAG00000026824	RAB30	100	100.000	Cebus_capucinus
ENSSSCG00000014900	RAB30	100	100.000	ENSCATG00000040441	RAB30	100	100.000	Cercocebus_atys
ENSSSCG00000014900	RAB30	100	100.000	ENSCLAG00000014030	RAB30	100	100.000	Chinchilla_lanigera
ENSSSCG00000014900	RAB30	100	100.000	ENSCSAG00000003704	RAB30	100	100.000	Chlorocebus_sabaeus
ENSSSCG00000014900	RAB30	100	97.537	ENSCPBG00000006855	RAB30	100	97.537	Chrysemys_picta_bellii
ENSSSCG00000014900	RAB30	100	99.507	ENSCANG00000022240	RAB30	100	99.507	Colobus_angolensis_palliatus
ENSSSCG00000014900	RAB30	100	100.000	ENSCGRG00001021787	Rab30	100	100.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000014900	RAB30	100	100.000	ENSCGRG00000014842	Rab30	100	100.000	Cricetulus_griseus_crigri
ENSSSCG00000014900	RAB30	100	85.714	ENSCSEG00000007292	rab30	100	85.714	Cynoglossus_semilaevis
ENSSSCG00000014900	RAB30	100	85.222	ENSCVAG00000018085	rab30	100	85.222	Cyprinodon_variegatus
ENSSSCG00000014900	RAB30	99	85.572	ENSDARG00000037884	rab30	100	85.572	Danio_rerio
ENSSSCG00000014900	RAB30	100	100.000	ENSDNOG00000039115	RAB30	100	100.000	Dasypus_novemcinctus
ENSSSCG00000014900	RAB30	100	99.015	ENSDORG00000010504	-	100	99.015	Dipodomys_ordii
ENSSSCG00000014900	RAB30	100	97.044	ENSDORG00000015066	-	100	97.044	Dipodomys_ordii
ENSSSCG00000014900	RAB30	85	73.988	FBgn0031882	Rab30	87	67.692	Drosophila_melanogaster
ENSSSCG00000014900	RAB30	100	100.000	ENSEASG00005012754	RAB30	100	100.000	Equus_asinus_asinus
ENSSSCG00000014900	RAB30	100	100.000	ENSECAG00000022769	RAB30	100	100.000	Equus_caballus
ENSSSCG00000014900	RAB30	100	84.314	ENSELUG00000022997	rab30	100	85.149	Esox_lucius
ENSSSCG00000014900	RAB30	100	100.000	ENSFCAG00000014416	RAB30	100	100.000	Felis_catus
ENSSSCG00000014900	RAB30	100	98.522	ENSFALG00000007765	RAB30	100	98.522	Ficedula_albicollis
ENSSSCG00000014900	RAB30	100	100.000	ENSFDAG00000014521	RAB30	100	100.000	Fukomys_damarensis
ENSSSCG00000014900	RAB30	100	85.714	ENSFHEG00000013918	rab30	100	85.714	Fundulus_heteroclitus
ENSSSCG00000014900	RAB30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSSSCG00000014900	RAB30	100	98.522	ENSGALG00000017248	RAB30	100	98.522	Gallus_gallus
ENSSSCG00000014900	RAB30	100	85.222	ENSGAFG00000020309	rab30	100	85.222	Gambusia_affinis
ENSSSCG00000014900	RAB30	100	87.192	ENSGACG00000012006	rab30	100	87.192	Gasterosteus_aculeatus
ENSSSCG00000014900	RAB30	100	97.537	ENSGAGG00000004474	RAB30	100	97.537	Gopherus_agassizii
ENSSSCG00000014900	RAB30	100	100.000	ENSGGOG00000017157	RAB30	100	100.000	Gorilla_gorilla
ENSSSCG00000014900	RAB30	100	86.700	ENSHBUG00000000993	rab30	93	86.700	Haplochromis_burtoni
ENSSSCG00000014900	RAB30	100	100.000	ENSHGLG00000002759	RAB30	100	100.000	Heterocephalus_glaber_female
ENSSSCG00000014900	RAB30	100	100.000	ENSHGLG00100001213	RAB30	100	100.000	Heterocephalus_glaber_male
ENSSSCG00000014900	RAB30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSSSCG00000014900	RAB30	99	87.562	ENSIPUG00000021010	Rab30	100	87.562	Ictalurus_punctatus
ENSSSCG00000014900	RAB30	100	100.000	ENSSTOG00000020966	RAB30	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000014900	RAB30	100	100.000	ENSJJAG00000020064	Rab30	100	100.000	Jaculus_jaculus
ENSSSCG00000014900	RAB30	100	85.714	ENSKMAG00000004439	rab30	100	85.714	Kryptolebias_marmoratus
ENSSSCG00000014900	RAB30	100	86.207	ENSLBEG00000001146	rab30	100	86.207	Labrus_bergylta
ENSSSCG00000014900	RAB30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSSSCG00000014900	RAB30	100	89.163	ENSLOCG00000005884	rab30	100	89.163	Lepisosteus_oculatus
ENSSSCG00000014900	RAB30	100	99.507	ENSLAFG00000010711	RAB30	100	99.507	Loxodonta_africana
ENSSSCG00000014900	RAB30	100	100.000	ENSMFAG00000033119	RAB30	100	100.000	Macaca_fascicularis
ENSSSCG00000014900	RAB30	100	100.000	ENSMMUG00000007842	RAB30	100	100.000	Macaca_mulatta
ENSSSCG00000014900	RAB30	100	100.000	ENSMNEG00000037406	RAB30	100	100.000	Macaca_nemestrina
ENSSSCG00000014900	RAB30	100	100.000	ENSMLEG00000039496	RAB30	100	100.000	Mandrillus_leucophaeus
ENSSSCG00000014900	RAB30	100	86.207	ENSMAMG00000011973	rab30	100	86.207	Mastacembelus_armatus
ENSSSCG00000014900	RAB30	100	86.700	ENSMZEG00005024032	rab30	93	86.700	Maylandia_zebra
ENSSSCG00000014900	RAB30	100	97.549	ENSMGAG00000015230	RAB30	100	97.549	Meleagris_gallopavo
ENSSSCG00000014900	RAB30	100	100.000	ENSMAUG00000008179	Rab30	100	100.000	Mesocricetus_auratus
ENSSSCG00000014900	RAB30	100	100.000	ENSMICG00000012002	RAB30	100	100.000	Microcebus_murinus
ENSSSCG00000014900	RAB30	100	100.000	ENSMOCG00000009821	-	100	100.000	Microtus_ochrogaster
ENSSSCG00000014900	RAB30	100	85.714	ENSMMOG00000000304	rab30	100	85.714	Mola_mola
ENSSSCG00000014900	RAB30	100	99.507	ENSMODG00000004506	RAB30	100	99.507	Monodelphis_domestica
ENSSSCG00000014900	RAB30	100	86.700	ENSMALG00000010438	rab30	100	86.700	Monopterus_albus
ENSSSCG00000014900	RAB30	100	99.507	MGP_CAROLIEiJ_G0029992	Rab30	100	99.507	Mus_caroli
ENSSSCG00000014900	RAB30	100	100.000	ENSMUSG00000030643	Rab30	100	100.000	Mus_musculus
ENSSSCG00000014900	RAB30	100	100.000	MGP_PahariEiJ_G0013212	Rab30	100	100.000	Mus_pahari
ENSSSCG00000014900	RAB30	100	100.000	MGP_SPRETEiJ_G0031102	Rab30	100	100.000	Mus_spretus
ENSSSCG00000014900	RAB30	100	100.000	ENSMPUG00000008088	RAB30	100	100.000	Mustela_putorius_furo
ENSSSCG00000014900	RAB30	100	98.522	ENSMLUG00000006552	RAB30	100	98.522	Myotis_lucifugus
ENSSSCG00000014900	RAB30	100	100.000	ENSNGAG00000018930	Rab30	100	100.000	Nannospalax_galili
ENSSSCG00000014900	RAB30	100	86.700	ENSNBRG00000002082	rab30	93	86.700	Neolamprologus_brichardi
ENSSSCG00000014900	RAB30	100	100.000	ENSNLEG00000029364	RAB30	100	100.000	Nomascus_leucogenys
ENSSSCG00000014900	RAB30	100	97.537	ENSMEUG00000012886	RAB30	100	97.537	Notamacropus_eugenii
ENSSSCG00000014900	RAB30	59	100.000	ENSOPRG00000007511	RAB30	100	100.000	Ochotona_princeps
ENSSSCG00000014900	RAB30	100	100.000	ENSODEG00000003833	RAB30	100	100.000	Octodon_degus
ENSSSCG00000014900	RAB30	100	86.700	ENSONIG00000005708	rab30	100	86.700	Oreochromis_niloticus
ENSSSCG00000014900	RAB30	100	100.000	ENSOCUG00000007580	RAB30	100	100.000	Oryctolagus_cuniculus
ENSSSCG00000014900	RAB30	100	85.714	ENSORLG00000029812	rab30	100	85.714	Oryzias_latipes
ENSSSCG00000014900	RAB30	100	85.714	ENSORLG00020015288	rab30	100	85.714	Oryzias_latipes_hni
ENSSSCG00000014900	RAB30	100	85.714	ENSORLG00015020972	rab30	100	85.714	Oryzias_latipes_hsok
ENSSSCG00000014900	RAB30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSSSCG00000014900	RAB30	100	100.000	ENSOGAG00000033189	RAB30	100	100.000	Otolemur_garnettii
ENSSSCG00000014900	RAB30	100	100.000	ENSOARG00000005688	RAB30	100	100.000	Ovis_aries
ENSSSCG00000014900	RAB30	100	100.000	ENSPPAG00000031604	RAB30	100	100.000	Pan_paniscus
ENSSSCG00000014900	RAB30	100	100.000	ENSPPRG00000023881	RAB30	100	100.000	Panthera_pardus
ENSSSCG00000014900	RAB30	100	100.000	ENSPTIG00000009836	RAB30	100	100.000	Panthera_tigris_altaica
ENSSSCG00000014900	RAB30	100	100.000	ENSPTRG00000004125	RAB30	100	100.000	Pan_troglodytes
ENSSSCG00000014900	RAB30	100	100.000	ENSPANG00000003974	RAB30	100	100.000	Papio_anubis
ENSSSCG00000014900	RAB30	99	88.614	ENSPKIG00000015202	rab30	99	88.614	Paramormyrops_kingsleyae
ENSSSCG00000014900	RAB30	100	96.552	ENSPSIG00000003078	RAB30	100	96.552	Pelodiscus_sinensis
ENSSSCG00000014900	RAB30	100	76.293	ENSPMGG00000016093	rab30	100	76.293	Periophthalmus_magnuspinnatus
ENSSSCG00000014900	RAB30	100	100.000	ENSPEMG00000023854	Rab30	100	100.000	Peromyscus_maniculatus_bairdii
ENSSSCG00000014900	RAB30	99	67.619	ENSPMAG00000006105	rab30	99	67.619	Petromyzon_marinus
ENSSSCG00000014900	RAB30	100	99.507	ENSPCIG00000027547	RAB30	94	99.507	Phascolarctos_cinereus
ENSSSCG00000014900	RAB30	100	85.714	ENSPFOG00000005479	rab30	100	85.714	Poecilia_formosa
ENSSSCG00000014900	RAB30	100	85.714	ENSPLAG00000015383	rab30	100	85.714	Poecilia_latipinna
ENSSSCG00000014900	RAB30	100	85.714	ENSPMEG00000009701	rab30	100	85.714	Poecilia_mexicana
ENSSSCG00000014900	RAB30	100	85.714	ENSPREG00000014634	rab30	100	85.714	Poecilia_reticulata
ENSSSCG00000014900	RAB30	100	100.000	ENSPPYG00000003733	RAB30	100	100.000	Pongo_abelii
ENSSSCG00000014900	RAB30	100	99.507	ENSPCAG00000000574	RAB30	100	99.507	Procavia_capensis
ENSSSCG00000014900	RAB30	100	100.000	ENSPCOG00000017316	RAB30	100	100.000	Propithecus_coquereli
ENSSSCG00000014900	RAB30	100	100.000	ENSPVAG00000005455	RAB30	100	100.000	Pteropus_vampyrus
ENSSSCG00000014900	RAB30	100	86.207	ENSPNYG00000009728	rab30	93	86.207	Pundamilia_nyererei
ENSSSCG00000014900	RAB30	99	87.065	ENSPNAG00000010760	rab30	100	87.065	Pygocentrus_nattereri
ENSSSCG00000014900	RAB30	100	100.000	ENSRNOG00000010224	Rab30	100	100.000	Rattus_norvegicus
ENSSSCG00000014900	RAB30	100	100.000	ENSRBIG00000039227	RAB30	100	100.000	Rhinopithecus_bieti
ENSSSCG00000014900	RAB30	100	100.000	ENSRROG00000031260	RAB30	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000014900	RAB30	100	100.000	ENSSBOG00000026403	RAB30	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000014900	RAB30	100	98.058	ENSSHAG00000018081	RAB30	100	98.058	Sarcophilus_harrisii
ENSSSCG00000014900	RAB30	100	85.714	ENSSMAG00000002500	rab30	100	85.714	Scophthalmus_maximus
ENSSSCG00000014900	RAB30	100	86.700	ENSSDUG00000013325	rab30	100	86.700	Seriola_dumerili
ENSSSCG00000014900	RAB30	100	86.700	ENSSLDG00000022533	rab30	100	86.700	Seriola_lalandi_dorsalis
ENSSSCG00000014900	RAB30	100	97.044	ENSSPUG00000006349	RAB30	100	97.044	Sphenodon_punctatus
ENSSSCG00000014900	RAB30	100	86.700	ENSSPAG00000013422	rab30	100	86.700	Stegastes_partitus
ENSSSCG00000014900	RAB30	100	98.522	ENSTGUG00000012941	RAB30	100	98.522	Taeniopygia_guttata
ENSSSCG00000014900	RAB30	99	86.070	ENSTRUG00000022559	rab30	99	86.070	Takifugu_rubripes
ENSSSCG00000014900	RAB30	100	100.000	ENSTBEG00000009832	RAB30	100	100.000	Tupaia_belangeri
ENSSSCG00000014900	RAB30	100	100.000	ENSTTRG00000006100	RAB30	100	100.000	Tursiops_truncatus
ENSSSCG00000014900	RAB30	100	100.000	ENSUAMG00000009326	RAB30	100	100.000	Ursus_americanus
ENSSSCG00000014900	RAB30	100	100.000	ENSUMAG00000023572	RAB30	100	100.000	Ursus_maritimus
ENSSSCG00000014900	RAB30	100	100.000	ENSVVUG00000017471	RAB30	100	100.000	Vulpes_vulpes
ENSSSCG00000014900	RAB30	100	93.103	ENSXETG00000013633	rab30	100	93.103	Xenopus_tropicalis
ENSSSCG00000014900	RAB30	100	85.714	ENSXMAG00000025848	rab30	100	85.714	Xiphophorus_maculatus