EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000015243 (Gene tree)
Gene ID: 100517360
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 92205 bases
Position: chr9:56657272-56749476
Accession: 100517360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000016167	zf-C2H2	PF00096.26	1.2e-33	1	5
ENSSSCP00000016167	zf-C2H2	PF00096.26	1.2e-33	2	5
ENSSSCP00000016167	zf-C2H2	PF00096.26	1.2e-33	3	5
ENSSSCP00000016167	zf-C2H2	PF00096.26	1.2e-33	4	5
ENSSSCP00000016167	zf-C2H2	PF00096.26	1.2e-33	5	5
ENSSSCP00000043120	zf-C2H2	PF00096.26	5.4e-33	1	5
ENSSSCP00000043120	zf-C2H2	PF00096.26	5.4e-33	2	5
ENSSSCP00000043120	zf-C2H2	PF00096.26	5.4e-33	3	5
ENSSSCP00000043120	zf-C2H2	PF00096.26	5.4e-33	4	5
ENSSSCP00000043120	zf-C2H2	PF00096.26	5.4e-33	5	5
ENSSSCP00000016167	zf-met	PF12874.7	6.2e-06	1	2
ENSSSCP00000016167	zf-met	PF12874.7	6.2e-06	2	2
ENSSSCP00000043120	zf-met	PF12874.7	9.5e-06	1	2
ENSSSCP00000043120	zf-met	PF12874.7	9.5e-06	2	2
ENSSSCP00000016167	zf-C2H2_jaz	PF12171.8	1.9e-17	1	1
ENSSSCP00000043120	zf-C2H2_jaz	PF12171.8	7.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037612	PRDM10-201	6633	XM_013979567	ENSSSCP00000043120	1155 (aa)	XP_013835021	A0A287AGT5
ENSSSCT00000016612	PRDM10-202	3155	-	ENSSSCP00000016167	1013 (aa)	-	F1S6E9

Gene Model

Click here to download ENSSSCG00000015243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015243	PRDM10	100	93.287	ENSG00000170325	PRDM10	100	93.064	Homo_sapiens
ENSSSCG00000015243	PRDM10	100	90.150	ENSAMEG00000002425	PRDM10	100	90.735	Ailuropoda_melanoleuca
ENSSSCG00000015243	PRDM10	99	86.974	ENSAPLG00000004858	PRDM10	100	84.351	Anas_platyrhynchos
ENSSSCG00000015243	PRDM10	100	85.190	ENSANAG00000022064	PRDM10	100	77.988	Aotus_nancymaae
ENSSSCG00000015243	PRDM10	100	94.768	ENSBTAG00000019001	PRDM10	100	95.187	Bos_taurus
ENSSSCG00000015243	PRDM10	100	93.090	ENSCJAG00000009235	PRDM10	100	92.839	Callithrix_jacchus
ENSSSCG00000015243	PRDM10	100	92.301	ENSCAFG00000010164	PRDM10	100	92.907	Canis_familiaris
ENSSSCG00000015243	PRDM10	100	91.079	ENSCAFG00020010152	PRDM10	100	91.674	Canis_lupus_dingo
ENSSSCG00000015243	PRDM10	100	94.867	ENSCHIG00000026530	PRDM10	100	94.632	Capra_hircus
ENSSSCG00000015243	PRDM10	100	93.880	ENSTSYG00000000544	PRDM10	100	93.621	Carlito_syrichta
ENSSSCG00000015243	PRDM10	100	85.478	ENSCAPG00000017296	PRDM10	100	85.470	Cavia_aperea
ENSSSCG00000015243	PRDM10	93	87.972	ENSCPOG00000000389	PRDM10	98	85.998	Cavia_porcellus
ENSSSCG00000015243	PRDM10	98	94.082	ENSCCAG00000024567	PRDM10	100	92.839	Cebus_capucinus
ENSSSCG00000015243	PRDM10	100	93.583	ENSCATG00000040031	PRDM10	100	93.437	Cercocebus_atys
ENSSSCG00000015243	PRDM10	100	92.794	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSSSCG00000015243	PRDM10	100	93.583	ENSCSAG00000002202	PRDM10	100	93.523	Chlorocebus_sabaeus
ENSSSCG00000015243	PRDM10	99	84.008	ENSCPBG00000026880	PRDM10	99	81.712	Chrysemys_picta_bellii
ENSSSCG00000015243	PRDM10	100	93.386	ENSCANG00000032669	PRDM10	100	92.925	Colobus_angolensis_palliatus
ENSSSCG00000015243	PRDM10	100	92.103	ENSCGRG00001021647	Prdm10	98	96.203	Cricetulus_griseus_chok1gshd
ENSSSCG00000015243	PRDM10	100	92.103	ENSCGRG00000006562	Prdm10	98	96.203	Cricetulus_griseus_crigri
ENSSSCG00000015243	PRDM10	94	92.332	ENSDNOG00000001366	PRDM10	95	92.647	Dasypus_novemcinctus
ENSSSCG00000015243	PRDM10	100	92.103	ENSDORG00000014292	Prdm10	100	91.271	Dipodomys_ordii
ENSSSCG00000015243	PRDM10	99	95.691	ENSEASG00005022914	PRDM10	100	95.242	Equus_asinus_asinus
ENSSSCG00000015243	PRDM10	99	95.691	ENSECAG00000011499	PRDM10	100	95.156	Equus_caballus
ENSSSCG00000015243	PRDM10	98	95.459	ENSFCAG00000004111	PRDM10	96	94.444	Felis_catus
ENSSSCG00000015243	PRDM10	99	82.034	ENSFALG00000004873	PRDM10	100	79.933	Ficedula_albicollis
ENSSSCG00000015243	PRDM10	100	93.880	ENSFDAG00000017311	PRDM10	100	90.948	Fukomys_damarensis
ENSSSCG00000015243	PRDM10	99	87.174	ENSGALG00000033660	PRDM10	99	85.242	Gallus_gallus
ENSSSCG00000015243	PRDM10	92	66.667	ENSGACG00000012293	prdm10	98	66.667	Gasterosteus_aculeatus
ENSSSCG00000015243	PRDM10	99	85.643	ENSGAGG00000012523	PRDM10	99	82.962	Gopherus_agassizii
ENSSSCG00000015243	PRDM10	100	93.682	ENSGGOG00000015359	PRDM10	100	93.023	Gorilla_gorilla
ENSSSCG00000015243	PRDM10	100	92.695	ENSHGLG00000001106	PRDM10	97	94.805	Heterocephalus_glaber_female
ENSSSCG00000015243	PRDM10	100	92.695	ENSHGLG00100002350	PRDM10	97	94.805	Heterocephalus_glaber_male
ENSSSCG00000015243	PRDM10	100	93.781	ENSSTOG00000002015	PRDM10	100	93.097	Ictidomys_tridecemlineatus
ENSSSCG00000015243	PRDM10	93	90.491	ENSJJAG00000021493	Prdm10	90	90.266	Jaculus_jaculus
ENSSSCG00000015243	PRDM10	100	90.069	ENSLAFG00000031867	PRDM10	100	89.546	Loxodonta_africana
ENSSSCG00000015243	PRDM10	100	93.583	ENSMFAG00000031008	PRDM10	100	93.351	Macaca_fascicularis
ENSSSCG00000015243	PRDM10	100	93.583	ENSMMUG00000017555	PRDM10	100	93.351	Macaca_mulatta
ENSSSCG00000015243	PRDM10	100	93.583	ENSMNEG00000036493	PRDM10	100	93.264	Macaca_nemestrina
ENSSSCG00000015243	PRDM10	94	89.575	ENSMLEG00000042028	PRDM10	100	91.892	Mandrillus_leucophaeus
ENSSSCG00000015243	PRDM10	99	83.719	ENSMGAG00000001112	PRDM10	100	81.583	Meleagris_gallopavo
ENSSSCG00000015243	PRDM10	100	93.880	ENSMICG00000013888	PRDM10	100	93.437	Microcebus_murinus
ENSSSCG00000015243	PRDM10	100	90.183	ENSMOCG00000021853	Prdm10	99	95.890	Microtus_ochrogaster
ENSSSCG00000015243	PRDM10	72	90.847	ENSMODG00000004979	PRDM10	99	87.188	Monodelphis_domestica
ENSSSCG00000015243	PRDM10	100	89.605	ENSMUSG00000042496	Prdm10	96	96.154	Mus_musculus
ENSSSCG00000015243	PRDM10	100	91.544	MGP_SPRETEiJ_G0033061	-	96	96.154	Mus_spretus
ENSSSCG00000015243	PRDM10	100	94.965	ENSMPUG00000008711	PRDM10	99	94.464	Mustela_putorius_furo
ENSSSCG00000015243	PRDM10	99	93.812	ENSMLUG00000013051	PRDM10	100	93.276	Myotis_lucifugus
ENSSSCG00000015243	PRDM10	100	92.695	ENSNGAG00000000580	Prdm10	100	91.962	Nannospalax_galili
ENSSSCG00000015243	PRDM10	100	93.781	ENSNLEG00000007488	PRDM10	100	93.351	Nomascus_leucogenys
ENSSSCG00000015243	PRDM10	100	91.051	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSSSCG00000015243	PRDM10	99	81.361	ENSOANG00000000577	-	100	78.809	Ornithorhynchus_anatinus
ENSSSCG00000015243	PRDM10	99	92.814	ENSOCUG00000003736	PRDM10	100	91.703	Oryctolagus_cuniculus
ENSSSCG00000015243	PRDM10	100	92.232	ENSOGAG00000010723	PRDM10	100	92.083	Otolemur_garnettii
ENSSSCG00000015243	PRDM10	100	95.064	ENSOARG00000014507	PRDM10	100	94.805	Ovis_aries
ENSSSCG00000015243	PRDM10	100	93.485	ENSPPAG00000042881	PRDM10	100	92.851	Pan_paniscus
ENSSSCG00000015243	PRDM10	100	94.571	ENSPPRG00000007002	PRDM10	100	94.204	Panthera_pardus
ENSSSCG00000015243	PRDM10	100	94.472	ENSPTIG00000013331	PRDM10	100	94.118	Panthera_tigris_altaica
ENSSSCG00000015243	PRDM10	100	93.583	ENSPTRG00000004477	PRDM10	100	93.023	Pan_troglodytes
ENSSSCG00000015243	PRDM10	100	93.386	ENSPANG00000017470	PRDM10	100	93.264	Papio_anubis
ENSSSCG00000015243	PRDM10	100	90.601	ENSPEMG00000014985	Prdm10	100	90.059	Peromyscus_maniculatus_bairdii
ENSSSCG00000015243	PRDM10	100	93.682	ENSPPYG00000004061	PRDM10	100	93.017	Pongo_abelii
ENSSSCG00000015243	PRDM10	98	82.312	ENSPCAG00000014514	PRDM10	100	82.977	Procavia_capensis
ENSSSCG00000015243	PRDM10	100	78.265	ENSPCOG00000023406	PRDM10	100	79.931	Propithecus_coquereli
ENSSSCG00000015243	PRDM10	99	94.910	ENSPVAG00000012764	PRDM10	100	94.397	Pteropus_vampyrus
ENSSSCG00000015243	PRDM10	100	91.271	ENSRNOG00000007853	Prdm10	100	91.530	Rattus_norvegicus
ENSSSCG00000015243	PRDM10	100	93.583	ENSRBIG00000030924	PRDM10	100	93.103	Rhinopithecus_bieti
ENSSSCG00000015243	PRDM10	100	93.583	ENSRROG00000034334	PRDM10	100	93.103	Rhinopithecus_roxellana
ENSSSCG00000015243	PRDM10	99	93.788	ENSSBOG00000008773	PRDM10	100	92.672	Saimiri_boliviensis_boliviensis
ENSSSCG00000015243	PRDM10	100	89.655	ENSSHAG00000004503	PRDM10	99	87.296	Sarcophilus_harrisii
ENSSSCG00000015243	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSSSCG00000015243	PRDM10	99	84.447	ENSSPUG00000001178	PRDM10	97	85.084	Sphenodon_punctatus
ENSSSCG00000015243	PRDM10	99	85.914	ENSTGUG00000000530	PRDM10	100	83.019	Taeniopygia_guttata
ENSSSCG00000015243	PRDM10	95	91.228	ENSTBEG00000007221	PRDM10	94	91.886	Tupaia_belangeri
ENSSSCG00000015243	PRDM10	100	94.047	ENSTTRG00000009189	PRDM10	100	94.047	Tursiops_truncatus
ENSSSCG00000015243	PRDM10	100	92.121	ENSUAMG00000018832	PRDM10	94	94.259	Ursus_americanus
ENSSSCG00000015243	PRDM10	100	91.926	ENSUMAG00000003167	PRDM10	99	94.240	Ursus_maritimus
ENSSSCG00000015243	PRDM10	100	93.426	ENSVVUG00000019878	PRDM10	100	94.031	Vulpes_vulpes
ENSSSCG00000015243	PRDM10	98	70.736	ENSXETG00000032173	PRDM10	100	67.830	Xenopus_tropicalis