EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000015387 (Gene tree)
Gene ID: 768110
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 24603 bases
Position: chr9:92299175-92323777
Accession: 768110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000016314	RRM_1	PF00076.22	2.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000016762	TRA2A-201	1932	XM_005656690	ENSSSCP00000016314	281 (aa)	XP_005656747	A0A288CG19

Gene Model

Click here to download ENSSSCG00000015387's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000015387	TRA2A	60	32.039	ENSSSCG00000037291	ELAVL4	69	35.821
ENSSSCG00000015387	TRA2A	54	75.497	ENSSSCG00000030225	TRA2B	96	64.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015387	TRA2A	100	99.645	ENSG00000164548	TRA2A	100	99.645	Homo_sapiens
ENSSSCG00000015387	TRA2A	90	75.556	ENSAPOG00000017425	tra2a	90	75.556	Acanthochromis_polyacanthus
ENSSSCG00000015387	TRA2A	95	98.148	ENSAMEG00000003501	TRA2A	84	98.148	Ailuropoda_melanoleuca
ENSSSCG00000015387	TRA2A	54	88.079	ENSACIG00000001333	tra2a	79	88.079	Amphilophus_citrinellus
ENSSSCG00000015387	TRA2A	90	76.296	ENSAOCG00000015445	tra2a	90	76.296	Amphiprion_ocellaris
ENSSSCG00000015387	TRA2A	90	76.296	ENSAPEG00000018557	tra2a	90	76.296	Amphiprion_percula
ENSSSCG00000015387	TRA2A	90	77.778	ENSATEG00000000671	tra2a	90	77.778	Anabas_testudineus
ENSSSCG00000015387	TRA2A	95	94.403	ENSAPLG00000013689	TRA2A	100	94.403	Anas_platyrhynchos
ENSSSCG00000015387	TRA2A	90	94.882	ENSACAG00000013502	TRA2A	90	94.094	Anolis_carolinensis
ENSSSCG00000015387	TRA2A	90	79.259	ENSACLG00000024845	tra2a	90	79.259	Astatotilapia_calliptera
ENSSSCG00000015387	TRA2A	60	89.017	ENSAMXG00000005553	tra2a	100	76.190	Astyanax_mexicanus
ENSSSCG00000015387	TRA2A	100	100.000	ENSBTAG00000012622	TRA2A	100	100.000	Bos_taurus
ENSSSCG00000015387	TRA2A	100	99.645	ENSCJAG00000001509	-	100	99.645	Callithrix_jacchus
ENSSSCG00000015387	TRA2A	94	98.099	ENSCJAG00000045802	-	100	98.099	Callithrix_jacchus
ENSSSCG00000015387	TRA2A	99	100.000	ENSCAFG00000002788	TRA2A	100	100.000	Canis_familiaris
ENSSSCG00000015387	TRA2A	90	99.209	ENSCAFG00020002745	TRA2A	95	99.209	Canis_lupus_dingo
ENSSSCG00000015387	TRA2A	100	99.645	ENSTSYG00000000388	TRA2A	100	99.645	Carlito_syrichta
ENSSSCG00000015387	TRA2A	86	85.950	ENSCAPG00000017377	TRA2A	87	86.307	Cavia_aperea
ENSSSCG00000015387	TRA2A	100	99.645	ENSCPOG00000010739	TRA2A	100	99.645	Cavia_porcellus
ENSSSCG00000015387	TRA2A	100	99.645	ENSCCAG00000019576	TRA2A	100	99.645	Cebus_capucinus
ENSSSCG00000015387	TRA2A	100	99.645	ENSCATG00000041219	TRA2A	100	99.645	Cercocebus_atys
ENSSSCG00000015387	TRA2A	100	99.645	ENSCLAG00000007917	TRA2A	100	99.645	Chinchilla_lanigera
ENSSSCG00000015387	TRA2A	99	99.642	ENSCSAG00000014051	TRA2A	99	99.642	Chlorocebus_sabaeus
ENSSSCG00000015387	TRA2A	100	99.291	ENSCHOG00000001130	TRA2A	100	99.291	Choloepus_hoffmanni
ENSSSCG00000015387	TRA2A	100	96.820	ENSCPBG00000022466	TRA2A	100	96.820	Chrysemys_picta_bellii
ENSSSCG00000015387	TRA2A	100	99.645	ENSCANG00000031292	TRA2A	100	99.645	Colobus_angolensis_palliatus
ENSSSCG00000015387	TRA2A	100	98.239	ENSCGRG00001019980	Tra2a	100	98.239	Cricetulus_griseus_chok1gshd
ENSSSCG00000015387	TRA2A	96	98.162	ENSCGRG00000006087	Tra2a	100	98.162	Cricetulus_griseus_crigri
ENSSSCG00000015387	TRA2A	90	70.696	ENSCSEG00000012193	tra2a	90	70.696	Cynoglossus_semilaevis
ENSSSCG00000015387	TRA2A	57	82.500	ENSDARG00000007863	tra2a	90	76.753	Danio_rerio
ENSSSCG00000015387	TRA2A	100	99.291	ENSDNOG00000039446	TRA2A	100	99.291	Dasypus_novemcinctus
ENSSSCG00000015387	TRA2A	100	98.936	ENSDORG00000009361	Tra2a	100	98.936	Dipodomys_ordii
ENSSSCG00000015387	TRA2A	100	81.882	ENSETEG00000007250	TRA2A	100	81.882	Echinops_telfairi
ENSSSCG00000015387	TRA2A	100	100.000	ENSEASG00005022002	TRA2A	100	100.000	Equus_asinus_asinus
ENSSSCG00000015387	TRA2A	100	100.000	ENSECAG00000011508	TRA2A	100	100.000	Equus_caballus
ENSSSCG00000015387	TRA2A	100	98.936	ENSEEUG00000015674	TRA2A	100	98.936	Erinaceus_europaeus
ENSSSCG00000015387	TRA2A	77	74.576	ENSELUG00000005846	tra2a	91	69.697	Esox_lucius
ENSSSCG00000015387	TRA2A	100	100.000	ENSFCAG00000005361	TRA2A	100	100.000	Felis_catus
ENSSSCG00000015387	TRA2A	96	95.167	ENSFALG00000009605	TRA2A	100	95.167	Ficedula_albicollis
ENSSSCG00000015387	TRA2A	100	98.940	ENSFDAG00000004949	TRA2A	100	98.940	Fukomys_damarensis
ENSSSCG00000015387	TRA2A	90	69.314	ENSGMOG00000013740	tra2a	91	69.314	Gadus_morhua
ENSSSCG00000015387	TRA2A	100	94.700	ENSGALG00000010973	TRA2A	100	94.700	Gallus_gallus
ENSSSCG00000015387	TRA2A	90	75.194	ENSGACG00000006878	tra2a	89	75.194	Gasterosteus_aculeatus
ENSSSCG00000015387	TRA2A	100	96.113	ENSGAGG00000005793	TRA2A	100	96.113	Gopherus_agassizii
ENSSSCG00000015387	TRA2A	100	99.645	ENSGGOG00000009053	TRA2A	100	99.645	Gorilla_gorilla
ENSSSCG00000015387	TRA2A	90	80.000	ENSHBUG00000018234	tra2a	90	80.000	Haplochromis_burtoni
ENSSSCG00000015387	TRA2A	100	99.645	ENSHGLG00000012168	TRA2A	100	99.645	Heterocephalus_glaber_female
ENSSSCG00000015387	TRA2A	100	99.645	ENSHGLG00100014577	TRA2A	100	99.645	Heterocephalus_glaber_male
ENSSSCG00000015387	TRA2A	64	64.921	ENSHCOG00000006314	tra2a	66	67.808	Hippocampus_comes
ENSSSCG00000015387	TRA2A	63	61.979	ENSHCOG00000006320	tra2a	95	62.304	Hippocampus_comes
ENSSSCG00000015387	TRA2A	100	99.645	ENSSTOG00000012073	TRA2A	100	99.645	Ictidomys_tridecemlineatus
ENSSSCG00000015387	TRA2A	100	98.936	ENSJJAG00000022787	Tra2a	100	98.936	Jaculus_jaculus
ENSSSCG00000015387	TRA2A	85	75.096	ENSLBEG00000005297	tra2a	88	75.096	Labrus_bergylta
ENSSSCG00000015387	TRA2A	90	88.189	ENSLACG00000014765	TRA2A	90	87.795	Latimeria_chalumnae
ENSSSCG00000015387	TRA2A	90	77.778	ENSLOCG00000011615	-	90	77.778	Lepisosteus_oculatus
ENSSSCG00000015387	TRA2A	100	99.293	ENSLAFG00000006598	TRA2A	100	99.293	Loxodonta_africana
ENSSSCG00000015387	TRA2A	100	99.645	ENSMFAG00000043211	TRA2A	100	99.645	Macaca_fascicularis
ENSSSCG00000015387	TRA2A	100	99.645	ENSMMUG00000006286	TRA2A	100	99.645	Macaca_mulatta
ENSSSCG00000015387	TRA2A	100	99.645	ENSMNEG00000040670	TRA2A	100	99.645	Macaca_nemestrina
ENSSSCG00000015387	TRA2A	100	99.645	ENSMLEG00000032154	TRA2A	100	99.645	Mandrillus_leucophaeus
ENSSSCG00000015387	TRA2A	77	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSSSCG00000015387	TRA2A	90	79.259	ENSMZEG00005009142	tra2a	90	79.259	Maylandia_zebra
ENSSSCG00000015387	TRA2A	96	94.465	ENSMGAG00000010514	TRA2A	100	94.465	Meleagris_gallopavo
ENSSSCG00000015387	TRA2A	100	77.580	ENSMICG00000036849	-	88	76.984	Microcebus_murinus
ENSSSCG00000015387	TRA2A	100	99.291	ENSMICG00000043639	-	100	99.448	Microcebus_murinus
ENSSSCG00000015387	TRA2A	63	91.477	ENSMOCG00000010249	-	63	90.964	Microtus_ochrogaster
ENSSSCG00000015387	TRA2A	71	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSSSCG00000015387	TRA2A	87	80.000	ENSMMOG00000020174	tra2a	83	79.916	Mola_mola
ENSSSCG00000015387	TRA2A	100	97.872	ENSMODG00000000807	TRA2A	100	97.872	Monodelphis_domestica
ENSSSCG00000015387	TRA2A	85	75.769	ENSMALG00000020875	tra2a	90	75.912	Monopterus_albus
ENSSSCG00000015387	TRA2A	100	98.239	ENSMUSG00000029817	Tra2a	100	98.239	Mus_musculus
ENSSSCG00000015387	TRA2A	100	97.887	MGP_PahariEiJ_G0022115	Tra2a	100	97.887	Mus_pahari
ENSSSCG00000015387	TRA2A	100	98.239	MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	Mus_spretus
ENSSSCG00000015387	TRA2A	100	99.644	ENSMPUG00000013480	TRA2A	100	99.644	Mustela_putorius_furo
ENSSSCG00000015387	TRA2A	100	98.233	ENSMLUG00000013972	TRA2A	100	98.233	Myotis_lucifugus
ENSSSCG00000015387	TRA2A	100	98.227	ENSNGAG00000023805	Tra2a	100	98.227	Nannospalax_galili
ENSSSCG00000015387	TRA2A	54	88.889	ENSNBRG00000005992	tra2a	73	90.196	Neolamprologus_brichardi
ENSSSCG00000015387	TRA2A	64	72.222	ENSNLEG00000029659	-	88	76.821	Nomascus_leucogenys
ENSSSCG00000015387	TRA2A	100	99.645	ENSNLEG00000014794	TRA2A	100	99.645	Nomascus_leucogenys
ENSSSCG00000015387	TRA2A	100	97.527	ENSMEUG00000001202	TRA2A	100	97.527	Notamacropus_eugenii
ENSSSCG00000015387	TRA2A	100	98.227	ENSOPRG00000007606	TRA2A	100	98.227	Ochotona_princeps
ENSSSCG00000015387	TRA2A	100	99.645	ENSODEG00000008335	TRA2A	100	99.645	Octodon_degus
ENSSSCG00000015387	TRA2A	90	79.121	ENSONIG00000004503	tra2a	90	79.121	Oreochromis_niloticus
ENSSSCG00000015387	TRA2A	89	88.760	ENSOANG00000014202	TRA2A	90	87.597	Ornithorhynchus_anatinus
ENSSSCG00000015387	TRA2A	100	99.291	ENSOCUG00000024139	TRA2A	100	99.291	Oryctolagus_cuniculus
ENSSSCG00000015387	TRA2A	82	70.000	ENSORLG00000022191	tra2a	60	74.699	Oryzias_latipes
ENSSSCG00000015387	TRA2A	82	69.565	ENSORLG00020003490	tra2a	60	74.096	Oryzias_latipes_hni
ENSSSCG00000015387	TRA2A	82	69.130	ENSORLG00015015485	tra2a	60	73.494	Oryzias_latipes_hsok
ENSSSCG00000015387	TRA2A	82	68.261	ENSOMEG00000017864	tra2a	60	72.289	Oryzias_melastigma
ENSSSCG00000015387	TRA2A	99	96.786	ENSOGAG00000009733	TRA2A	99	96.786	Otolemur_garnettii
ENSSSCG00000015387	TRA2A	100	98.932	ENSOARG00000013147	TRA2A	100	98.932	Ovis_aries
ENSSSCG00000015387	TRA2A	90	88.281	ENSOARG00000002323	-	100	89.825	Ovis_aries
ENSSSCG00000015387	TRA2A	99	99.642	ENSPPAG00000034382	TRA2A	99	99.642	Pan_paniscus
ENSSSCG00000015387	TRA2A	100	100.000	ENSPPRG00000015216	TRA2A	100	100.000	Panthera_pardus
ENSSSCG00000015387	TRA2A	100	100.000	ENSPTIG00000021114	TRA2A	100	100.000	Panthera_tigris_altaica
ENSSSCG00000015387	TRA2A	100	99.645	ENSPTRG00000018988	TRA2A	100	99.645	Pan_troglodytes
ENSSSCG00000015387	TRA2A	100	99.645	ENSPTRG00000046098	-	100	99.645	Pan_troglodytes
ENSSSCG00000015387	TRA2A	100	99.645	ENSPANG00000014541	TRA2A	100	99.645	Papio_anubis
ENSSSCG00000015387	TRA2A	90	76.667	ENSPKIG00000012298	tra2a	90	75.926	Paramormyrops_kingsleyae
ENSSSCG00000015387	TRA2A	88	94.378	ENSPSIG00000014993	TRA2A	90	94.378	Pelodiscus_sinensis
ENSSSCG00000015387	TRA2A	100	98.587	ENSPEMG00000008564	-	100	98.587	Peromyscus_maniculatus_bairdii
ENSSSCG00000015387	TRA2A	63	70.056	ENSPMAG00000007947	tra2a	59	70.122	Petromyzon_marinus
ENSSSCG00000015387	TRA2A	100	97.872	ENSPCIG00000007917	TRA2A	100	97.872	Phascolarctos_cinereus
ENSSSCG00000015387	TRA2A	100	99.645	ENSPPYG00000017728	TRA2A	100	99.645	Pongo_abelii
ENSSSCG00000015387	TRA2A	99	98.571	ENSPCAG00000004148	TRA2A	100	98.571	Procavia_capensis
ENSSSCG00000015387	TRA2A	100	85.409	ENSPCOG00000020465	TRA2A	100	85.409	Propithecus_coquereli
ENSSSCG00000015387	TRA2A	100	98.940	ENSPVAG00000011298	TRA2A	100	98.940	Pteropus_vampyrus
ENSSSCG00000015387	TRA2A	54	87.179	ENSPNYG00000020134	tra2a	76	87.179	Pundamilia_nyererei
ENSSSCG00000015387	TRA2A	90	73.704	ENSPNAG00000000482	tra2a	90	71.481	Pygocentrus_nattereri
ENSSSCG00000015387	TRA2A	100	98.239	ENSRNOG00000009156	Tra2a	100	98.239	Rattus_norvegicus
ENSSSCG00000015387	TRA2A	100	99.291	ENSRROG00000030758	TRA2A	100	99.448	Rhinopithecus_roxellana
ENSSSCG00000015387	TRA2A	100	99.645	ENSSBOG00000031562	TRA2A	100	99.645	Saimiri_boliviensis_boliviensis
ENSSSCG00000015387	TRA2A	89	95.200	ENSSHAG00000005727	TRA2A	88	95.200	Sarcophilus_harrisii
ENSSSCG00000015387	TRA2A	90	80.556	ENSSFOG00015014004	tra2a	90	75.185	Scleropages_formosus
ENSSSCG00000015387	TRA2A	93	74.021	ENSSMAG00000014242	tra2a	90	73.704	Scophthalmus_maximus
ENSSSCG00000015387	TRA2A	90	83.203	ENSSDUG00000005610	tra2a	89	83.203	Seriola_dumerili
ENSSSCG00000015387	TRA2A	54	88.742	ENSSLDG00000025577	tra2a	81	88.742	Seriola_lalandi_dorsalis
ENSSSCG00000015387	TRA2A	100	78.648	ENSSARG00000012900	TRA2A	100	78.648	Sorex_araneus
ENSSSCG00000015387	TRA2A	100	96.167	ENSSPUG00000006143	TRA2A	100	96.167	Sphenodon_punctatus
ENSSSCG00000015387	TRA2A	90	79.259	ENSSPAG00000004184	tra2a	90	79.259	Stegastes_partitus
ENSSSCG00000015387	TRA2A	60	90.533	ENSTGUG00000002795	TRA2A	62	89.759	Taeniopygia_guttata
ENSSSCG00000015387	TRA2A	100	83.333	ENSTBEG00000013773	TRA2A	100	83.333	Tupaia_belangeri
ENSSSCG00000015387	TRA2A	100	99.644	ENSTTRG00000008922	TRA2A	100	99.644	Tursiops_truncatus
ENSSSCG00000015387	TRA2A	64	97.802	ENSUMAG00000001181	TRA2A	94	97.802	Ursus_maritimus
ENSSSCG00000015387	TRA2A	100	85.765	ENSVPAG00000001829	TRA2A	100	85.765	Vicugna_pacos
ENSSSCG00000015387	TRA2A	100	100.000	ENSVVUG00000001045	TRA2A	100	100.000	Vulpes_vulpes
ENSSSCG00000015387	TRA2A	90	82.890	ENSXETG00000007397	tra2a	90	82.890	Xenopus_tropicalis