EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000015569 (Gene tree)
Gene ID: 100518924
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 105302 bases
Position: chr9:126347586-126452887
Accession: 100518924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057691	PIN_4	PF13638.6	1.2e-26	1	1
ENSSSCP00000036769	PIN_4	PF13638.6	1.3e-26	1	1
ENSSSCP00000044533	PIN_4	PF13638.6	1.4e-26	1	1
ENSSSCP00000016506	PIN_4	PF13638.6	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000040797	SWT1-203	2643	-	ENSSSCP00000044533	880 (aa)	-	A0A287AKV7
ENSSSCT00000055779	SWT1-202	2580	-	ENSSSCP00000036769	856 (aa)	-	A0A286ZYS0
ENSSSCT00000037950	SWT1-204	2445	-	ENSSSCP00000057691	814 (aa)	-	A0A287BNN3
ENSSSCT00000016960	SWT1-201	2748	XM_005667827	ENSSSCP00000016506	900 (aa)	XP_005667884	F1S3N5

Gene Model

Click here to download ENSSSCG00000015569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015569	SWT1	99	82.009	ENSG00000116668	SWT1	99	81.436	Homo_sapiens
ENSSSCG00000015569	SWT1	62	34.483	ENSAPOG00000014897	-	58	33.966	Acanthochromis_polyacanthus
ENSSSCG00000015569	SWT1	100	83.610	ENSAMEG00000013585	SWT1	100	83.167	Ailuropoda_melanoleuca
ENSSSCG00000015569	SWT1	66	34.073	ENSAOCG00000013932	swt1	63	33.914	Amphiprion_ocellaris
ENSSSCG00000015569	SWT1	66	34.073	ENSAPEG00000009613	-	63	33.914	Amphiprion_percula
ENSSSCG00000015569	SWT1	72	34.375	ENSATEG00000018946	swt1	66	34.077	Anabas_testudineus
ENSSSCG00000015569	SWT1	81	48.391	ENSAPLG00000008607	SWT1	100	48.257	Anas_platyrhynchos
ENSSSCG00000015569	SWT1	66	47.167	ENSACAG00000002276	SWT1	69	46.500	Anolis_carolinensis
ENSSSCG00000015569	SWT1	99	81.788	ENSANAG00000027068	SWT1	99	79.227	Aotus_nancymaae
ENSSSCG00000015569	SWT1	68	32.542	ENSACLG00000009742	swt1	76	31.811	Astatotilapia_calliptera
ENSSSCG00000015569	SWT1	65	38.992	ENSAMXG00000010971	swt1	60	39.262	Astyanax_mexicanus
ENSSSCG00000015569	SWT1	79	77.812	ENSBTAG00000004492	SWT1	99	82.287	Bos_taurus
ENSSSCG00000015569	SWT1	100	79.139	ENSCJAG00000005544	SWT1	94	81.192	Callithrix_jacchus
ENSSSCG00000015569	SWT1	100	83.499	ENSCAFG00000013543	SWT1	99	83.120	Canis_familiaris
ENSSSCG00000015569	SWT1	100	82.308	ENSCAFG00020015648	SWT1	99	85.142	Canis_lupus_dingo
ENSSSCG00000015569	SWT1	94	84.342	ENSCHIG00000023511	SWT1	100	88.156	Capra_hircus
ENSSSCG00000015569	SWT1	100	81.678	ENSTSYG00000010470	SWT1	100	81.678	Carlito_syrichta
ENSSSCG00000015569	SWT1	100	77.234	ENSCPOG00000014251	SWT1	100	77.354	Cavia_porcellus
ENSSSCG00000015569	SWT1	99	82.009	ENSCCAG00000033926	SWT1	99	81.436	Cebus_capucinus
ENSSSCG00000015569	SWT1	99	82.178	ENSCATG00000042210	SWT1	99	86.927	Cercocebus_atys
ENSSSCG00000015569	SWT1	100	77.073	ENSCLAG00000013959	SWT1	94	79.363	Chinchilla_lanigera
ENSSSCG00000015569	SWT1	99	81.848	ENSCSAG00000012895	SWT1	99	81.167	Chlorocebus_sabaeus
ENSSSCG00000015569	SWT1	62	86.875	ENSCHOG00000002211	-	58	86.875	Choloepus_hoffmanni
ENSSSCG00000015569	SWT1	98	46.851	ENSCPBG00000015691	SWT1	95	47.411	Chrysemys_picta_bellii
ENSSSCG00000015569	SWT1	99	82.009	ENSCANG00000032207	SWT1	99	86.348	Colobus_angolensis_palliatus
ENSSSCG00000015569	SWT1	100	74.419	ENSCGRG00001022955	Swt1	93	75.878	Cricetulus_griseus_chok1gshd
ENSSSCG00000015569	SWT1	100	74.419	ENSCGRG00000010224	Swt1	95	75.878	Cricetulus_griseus_crigri
ENSSSCG00000015569	SWT1	64	34.118	ENSCSEG00000017352	swt1	75	34.622	Cynoglossus_semilaevis
ENSSSCG00000015569	SWT1	63	39.373	ENSDARG00000094010	swt1	57	40.385	Danio_rerio
ENSSSCG00000015569	SWT1	99	76.727	ENSDNOG00000005254	SWT1	94	77.806	Dasypus_novemcinctus
ENSSSCG00000015569	SWT1	90	80.446	ENSDORG00000010531	Swt1	95	80.322	Dipodomys_ordii
ENSSSCG00000015569	SWT1	95	82.798	ENSEASG00005005530	SWT1	97	83.247	Equus_asinus_asinus
ENSSSCG00000015569	SWT1	92	83.494	ENSECAG00000012085	SWT1	99	83.333	Equus_caballus
ENSSSCG00000015569	SWT1	90	87.356	ENSEEUG00000003664	SWT1	85	87.356	Erinaceus_europaeus
ENSSSCG00000015569	SWT1	64	36.877	ENSELUG00000020565	swt1	58	36.711	Esox_lucius
ENSSSCG00000015569	SWT1	100	84.088	ENSFCAG00000011286	SWT1	95	85.029	Felis_catus
ENSSSCG00000015569	SWT1	84	43.966	ENSFALG00000003206	SWT1	89	44.403	Ficedula_albicollis
ENSSSCG00000015569	SWT1	100	77.409	ENSFDAG00000007569	SWT1	100	77.409	Fukomys_damarensis
ENSSSCG00000015569	SWT1	75	48.649	ENSGALG00000034230	SWT1	78	48.649	Gallus_gallus
ENSSSCG00000015569	SWT1	62	33.560	ENSGAFG00000007803	-	60	32.784	Gambusia_affinis
ENSSSCG00000015569	SWT1	89	48.432	ENSGAGG00000025050	SWT1	99	57.686	Gopherus_agassizii
ENSSSCG00000015569	SWT1	60	86.832	ENSGGOG00000041167	-	95	86.832	Gorilla_gorilla
ENSSSCG00000015569	SWT1	69	32.519	ENSHBUG00000006188	swt1	76	31.908	Haplochromis_burtoni
ENSSSCG00000015569	SWT1	99	78.027	ENSHGLG00000006542	SWT1	97	80.930	Heterocephalus_glaber_female
ENSSSCG00000015569	SWT1	99	79.955	ENSHGLG00100014408	SWT1	99	79.596	Heterocephalus_glaber_male
ENSSSCG00000015569	SWT1	74	34.357	ENSIPUG00000009113	-	69	34.738	Ictalurus_punctatus
ENSSSCG00000015569	SWT1	100	79.139	ENSSTOG00000010356	SWT1	100	79.139	Ictidomys_tridecemlineatus
ENSSSCG00000015569	SWT1	100	70.111	ENSJJAG00000015927	Swt1	94	73.091	Jaculus_jaculus
ENSSSCG00000015569	SWT1	62	34.305	ENSKMAG00000012533	swt1	59	33.670	Kryptolebias_marmoratus
ENSSSCG00000015569	SWT1	62	36.545	ENSLBEG00000020663	-	59	36.047	Labrus_bergylta
ENSSSCG00000015569	SWT1	76	46.933	ENSLACG00000009194	SWT1	99	46.933	Latimeria_chalumnae
ENSSSCG00000015569	SWT1	74	37.697	ENSLOCG00000001749	swt1	98	42.222	Lepisosteus_oculatus
ENSSSCG00000015569	SWT1	65	88.265	ENSLAFG00000004346	-	100	88.265	Loxodonta_africana
ENSSSCG00000015569	SWT1	99	81.518	ENSMFAG00000031793	SWT1	99	86.667	Macaca_fascicularis
ENSSSCG00000015569	SWT1	99	79.062	ENSMMUG00000013882	SWT1	99	83.505	Macaca_mulatta
ENSSSCG00000015569	SWT1	99	81.518	ENSMNEG00000035502	SWT1	99	86.496	Macaca_nemestrina
ENSSSCG00000015569	SWT1	99	82.450	ENSMLEG00000038692	SWT1	99	87.097	Mandrillus_leucophaeus
ENSSSCG00000015569	SWT1	69	32.519	ENSMZEG00005018489	swt1	76	31.908	Maylandia_zebra
ENSSSCG00000015569	SWT1	64	52.676	ENSMGAG00000000973	SWT1	100	52.508	Meleagris_gallopavo
ENSSSCG00000015569	SWT1	100	67.687	ENSMAUG00000007996	Swt1	92	68.735	Mesocricetus_auratus
ENSSSCG00000015569	SWT1	100	83.885	ENSMICG00000014975	SWT1	94	84.813	Microcebus_murinus
ENSSSCG00000015569	SWT1	100	72.475	ENSMOCG00000009776	Swt1	93	74.091	Microtus_ochrogaster
ENSSSCG00000015569	SWT1	99	61.105	ENSMODG00000007472	SWT1	94	62.240	Monodelphis_domestica
ENSSSCG00000015569	SWT1	62	36.907	ENSMALG00000019308	swt1	57	36.842	Monopterus_albus
ENSSSCG00000015569	SWT1	99	70.477	MGP_CAROLIEiJ_G0014692	Swt1	94	73.122	Mus_caroli
ENSSSCG00000015569	SWT1	99	69.700	ENSMUSG00000052748	Swt1	99	65.323	Mus_musculus
ENSSSCG00000015569	SWT1	100	72.284	MGP_PahariEiJ_G0027928	Swt1	99	68.145	Mus_pahari
ENSSSCG00000015569	SWT1	99	70.477	MGP_SPRETEiJ_G0015499	Swt1	99	66.935	Mus_spretus
ENSSSCG00000015569	SWT1	100	83.038	ENSMPUG00000011913	SWT1	95	84.877	Mustela_putorius_furo
ENSSSCG00000015569	SWT1	99	80.222	ENSMLUG00000001142	SWT1	93	81.382	Myotis_lucifugus
ENSSSCG00000015569	SWT1	100	76.275	ENSNGAG00000021080	Swt1	92	77.608	Nannospalax_galili
ENSSSCG00000015569	SWT1	99	81.457	ENSNLEG00000018031	SWT1	99	80.773	Nomascus_leucogenys
ENSSSCG00000015569	SWT1	100	46.527	ENSMEUG00000000236	-	94	48.595	Notamacropus_eugenii
ENSSSCG00000015569	SWT1	88	69.952	ENSOPRG00000000692	SWT1	82	69.952	Ochotona_princeps
ENSSSCG00000015569	SWT1	63	33.940	ENSONIG00000009994	swt1	100	35.009	Oreochromis_niloticus
ENSSSCG00000015569	SWT1	87	56.964	ENSOANG00000001013	-	100	56.964	Ornithorhynchus_anatinus
ENSSSCG00000015569	SWT1	99	70.166	ENSOCUG00000004901	SWT1	94	72.196	Oryctolagus_cuniculus
ENSSSCG00000015569	SWT1	62	33.733	ENSORLG00000009682	swt1	59	33.390	Oryzias_latipes
ENSSSCG00000015569	SWT1	62	34.021	ENSORLG00020011654	swt1	59	33.677	Oryzias_latipes_hni
ENSSSCG00000015569	SWT1	62	33.733	ENSORLG00015007734	swt1	59	33.390	Oryzias_latipes_hsok
ENSSSCG00000015569	SWT1	72	33.830	ENSOMEG00000006607	swt1	66	33.681	Oryzias_melastigma
ENSSSCG00000015569	SWT1	100	80.552	ENSOGAG00000016195	SWT1	100	79.956	Otolemur_garnettii
ENSSSCG00000015569	SWT1	100	85.017	ENSOARG00000004156	SWT1	93	86.284	Ovis_aries
ENSSSCG00000015569	SWT1	99	81.678	ENSPPAG00000021400	SWT1	99	81.105	Pan_paniscus
ENSSSCG00000015569	SWT1	100	84.292	ENSPPRG00000023754	SWT1	95	85.731	Panthera_pardus
ENSSSCG00000015569	SWT1	100	84.181	ENSPTIG00000021889	SWT1	95	85.614	Panthera_tigris_altaica
ENSSSCG00000015569	SWT1	99	81.678	ENSPTRG00000001777	SWT1	99	81.105	Pan_troglodytes
ENSSSCG00000015569	SWT1	99	81.628	ENSPANG00000005099	SWT1	99	86.418	Papio_anubis
ENSSSCG00000015569	SWT1	64	35.540	ENSPKIG00000005979	swt1	59	35.079	Paramormyrops_kingsleyae
ENSSSCG00000015569	SWT1	97	46.145	ENSPSIG00000008961	SWT1	94	46.597	Pelodiscus_sinensis
ENSSSCG00000015569	SWT1	100	73.171	ENSPEMG00000008208	Swt1	92	74.795	Peromyscus_maniculatus_bairdii
ENSSSCG00000015569	SWT1	100	61.489	ENSPCIG00000002443	SWT1	96	75.573	Phascolarctos_cinereus
ENSSSCG00000015569	SWT1	63	34.262	ENSPFOG00000010988	-	70	33.770	Poecilia_formosa
ENSSSCG00000015569	SWT1	62	34.349	ENSPLAG00000022908	-	59	33.841	Poecilia_latipinna
ENSSSCG00000015569	SWT1	62	34.010	ENSPMEG00000006943	-	59	33.618	Poecilia_mexicana
ENSSSCG00000015569	SWT1	99	82.230	ENSPPYG00000000415	SWT1	99	81.547	Pongo_abelii
ENSSSCG00000015569	SWT1	92	83.721	ENSPCAG00000008337	SWT1	87	79.688	Procavia_capensis
ENSSSCG00000015569	SWT1	70	86.813	ENSPCOG00000018195	-	93	86.813	Propithecus_coquereli
ENSSSCG00000015569	SWT1	87	83.731	ENSPVAG00000005968	SWT1	80	83.795	Pteropus_vampyrus
ENSSSCG00000015569	SWT1	69	32.519	ENSPNYG00000012934	swt1	76	31.908	Pundamilia_nyererei
ENSSSCG00000015569	SWT1	63	37.435	ENSPNAG00000017795	swt1	58	37.435	Pygocentrus_nattereri
ENSSSCG00000015569	SWT1	100	72.044	ENSRNOG00000032258	Swt1	92	74.503	Rattus_norvegicus
ENSSSCG00000015569	SWT1	99	78.808	ENSRBIG00000040630	SWT1	99	83.276	Rhinopithecus_bieti
ENSSSCG00000015569	SWT1	78	80.818	ENSRROG00000028596	SWT1	97	81.077	Rhinopithecus_roxellana
ENSSSCG00000015569	SWT1	99	82.048	ENSSBOG00000028825	SWT1	94	83.547	Saimiri_boliviensis_boliviensis
ENSSSCG00000015569	SWT1	100	61.422	ENSSHAG00000009241	SWT1	94	62.586	Sarcophilus_harrisii
ENSSSCG00000015569	SWT1	64	39.757	ENSSFOG00015004895	swt1	58	39.410	Scleropages_formosus
ENSSSCG00000015569	SWT1	68	32.975	ENSSMAG00000020761	-	51	32.822	Scophthalmus_maximus
ENSSSCG00000015569	SWT1	62	34.880	ENSSDUG00000012345	swt1	58	34.536	Seriola_dumerili
ENSSSCG00000015569	SWT1	62	34.768	ENSSLDG00000003821	swt1	58	34.423	Seriola_lalandi_dorsalis
ENSSSCG00000015569	SWT1	55	54.767	ENSSARG00000011524	-	99	50.579	Sorex_araneus
ENSSSCG00000015569	SWT1	78	49.044	ENSSPUG00000003899	SWT1	81	48.916	Sphenodon_punctatus
ENSSSCG00000015569	SWT1	62	33.333	ENSSPAG00000001030	swt1	58	33.161	Stegastes_partitus
ENSSSCG00000015569	SWT1	63	54.383	ENSTGUG00000003718	-	100	54.383	Taeniopygia_guttata
ENSSSCG00000015569	SWT1	64	35.333	ENSTRUG00000006420	swt1	63	34.833	Takifugu_rubripes
ENSSSCG00000015569	SWT1	100	83.867	ENSTTRG00000005914	SWT1	100	83.867	Tursiops_truncatus
ENSSSCG00000015569	SWT1	100	82.392	ENSUAMG00000020937	SWT1	99	85.714	Ursus_americanus
ENSSSCG00000015569	SWT1	100	83.628	ENSUMAG00000021918	SWT1	95	85.129	Ursus_maritimus
ENSSSCG00000015569	SWT1	92	91.253	ENSVPAG00000011855	SWT1	86	91.253	Vicugna_pacos
ENSSSCG00000015569	SWT1	100	83.942	ENSVVUG00000009182	SWT1	100	83.574	Vulpes_vulpes
ENSSSCG00000015569	SWT1	63	34.739	ENSXMAG00000023472	-	60	33.831	Xiphophorus_maculatus