EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000015620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5870 bases
Position: chr9:133852419-133858288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000016560	RRM_1	PF00076.22	2.1e-30	1	2
ENSSSCP00000016560	RRM_1	PF00076.22	2.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000017014	-	1044	-	ENSSSCP00000016560	347 (aa)	-	F1SF34

Gene Model

Click here to download ENSSSCG00000015620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000015620	-	89	87.261	ENSSSCG00000010685	-	97	90.909
ENSSSCG00000015620	-	89	69.255	ENSSSCG00000023409	TIA1	90	72.664

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015620	-	89	87.261	ENSG00000151923	TIAL1	97	86.435	Homo_sapiens
ENSSSCG00000015620	-	90	87.261	ENSAMEG00000010147	TIAL1	97	86.435	Ailuropoda_melanoleuca
ENSSSCG00000015620	-	90	83.758	ENSAPLG00000009088	TIAL1	97	80.757	Anas_platyrhynchos
ENSSSCG00000015620	-	86	81.639	ENSACAG00000016986	TIAL1	89	81.533	Anolis_carolinensis
ENSSSCG00000015620	-	90	87.261	ENSANAG00000034445	TIAL1	97	86.435	Aotus_nancymaae
ENSSSCG00000015620	-	90	87.261	ENSBTAG00000004080	TIAL1	97	86.435	Bos_taurus
ENSSSCG00000015620	-	90	87.261	ENSCJAG00000019682	TIAL1	97	86.435	Callithrix_jacchus
ENSSSCG00000015620	-	90	87.261	ENSCAFG00000012171	TIAL1	97	86.435	Canis_familiaris
ENSSSCG00000015620	-	90	87.261	ENSCAFG00020013891	TIAL1	97	86.435	Canis_lupus_dingo
ENSSSCG00000015620	-	90	87.261	ENSCHIG00000020810	TIAL1	97	86.435	Capra_hircus
ENSSSCG00000015620	-	90	87.261	ENSTSYG00000004348	TIAL1	100	87.059	Carlito_syrichta
ENSSSCG00000015620	-	89	82.484	ENSCCAG00000027590	-	100	80.216	Cebus_capucinus
ENSSSCG00000015620	-	89	76.433	ENSCCAG00000002561	TIAL1	97	75.710	Cebus_capucinus
ENSSSCG00000015620	-	90	87.059	ENSCATG00000043838	TIAL1	100	87.059	Cercocebus_atys
ENSSSCG00000015620	-	90	86.943	ENSCLAG00000001273	TIAL1	100	86.120	Chinchilla_lanigera
ENSSSCG00000015620	-	90	87.261	ENSCSAG00000004734	TIAL1	97	86.435	Chlorocebus_sabaeus
ENSSSCG00000015620	-	90	79.016	ENSCHOG00000009888	TIAL1	78	79.016	Choloepus_hoffmanni
ENSSSCG00000015620	-	90	83.439	ENSCPBG00000001103	TIAL1	98	80.442	Chrysemys_picta_bellii
ENSSSCG00000015620	-	90	87.261	ENSCANG00000017395	TIAL1	100	87.261	Colobus_angolensis_palliatus
ENSSSCG00000015620	-	89	86.624	ENSCGRG00001012762	Tial1	97	85.804	Cricetulus_griseus_chok1gshd
ENSSSCG00000015620	-	89	86.624	ENSCGRG00000017323	Tial1	100	85.804	Cricetulus_griseus_crigri
ENSSSCG00000015620	-	90	86.885	ENSDNOG00000009552	TIAL1	100	86.885	Dasypus_novemcinctus
ENSSSCG00000015620	-	90	87.261	ENSDORG00000010683	Tial1	97	86.435	Dipodomys_ordii
ENSSSCG00000015620	-	89	86.624	ENSETEG00000020276	TIAL1	100	85.804	Echinops_telfairi
ENSSSCG00000015620	-	90	87.261	ENSEASG00005014449	TIAL1	97	86.435	Equus_asinus_asinus
ENSSSCG00000015620	-	90	87.261	ENSECAG00000009970	TIAL1	97	86.435	Equus_caballus
ENSSSCG00000015620	-	90	86.943	ENSEEUG00000011861	TIAL1	100	86.120	Erinaceus_europaeus
ENSSSCG00000015620	-	90	87.261	ENSFCAG00000031690	TIAL1	97	90.909	Felis_catus
ENSSSCG00000015620	-	90	86.943	ENSFDAG00000003933	TIAL1	100	86.235	Fukomys_damarensis
ENSSSCG00000015620	-	90	83.758	ENSGALG00000009427	TIAL1	98	80.757	Gallus_gallus
ENSSSCG00000015620	-	90	83.758	ENSGAGG00000023119	TIAL1	98	80.442	Gopherus_agassizii
ENSSSCG00000015620	-	90	87.261	ENSGGOG00000001816	TIAL1	100	87.059	Gorilla_gorilla
ENSSSCG00000015620	-	85	67.667	ENSHGLG00000009491	-	69	70.189	Heterocephalus_glaber_female
ENSSSCG00000015620	-	89	77.070	ENSHGLG00000013775	-	78	76.341	Heterocephalus_glaber_female
ENSSSCG00000015620	-	85	67.667	ENSHGLG00100006330	-	69	70.189	Heterocephalus_glaber_male
ENSSSCG00000015620	-	90	86.624	ENSHGLG00100015062	TIAL1	98	85.804	Heterocephalus_glaber_male
ENSSSCG00000015620	-	90	87.261	ENSSTOG00000025095	TIAL1	98	86.435	Ictidomys_tridecemlineatus
ENSSSCG00000015620	-	89	86.624	ENSJJAG00000005398	-	100	85.804	Jaculus_jaculus
ENSSSCG00000015620	-	70	72.065	ENSJJAG00000022559	-	100	72.065	Jaculus_jaculus
ENSSSCG00000015620	-	89	77.070	ENSLACG00000011749	TIAL1	99	74.763	Latimeria_chalumnae
ENSSSCG00000015620	-	90	87.261	ENSLAFG00000003412	TIAL1	100	86.435	Loxodonta_africana
ENSSSCG00000015620	-	90	87.261	ENSMFAG00000002789	TIAL1	97	86.435	Macaca_fascicularis
ENSSSCG00000015620	-	90	87.261	ENSMMUG00000001472	TIAL1	100	87.059	Macaca_mulatta
ENSSSCG00000015620	-	89	87.261	ENSMNEG00000032245	TIAL1	100	86.364	Macaca_nemestrina
ENSSSCG00000015620	-	90	87.261	ENSMLEG00000034719	TIAL1	100	87.261	Mandrillus_leucophaeus
ENSSSCG00000015620	-	89	81.529	ENSMGAG00000011368	TIAL1	99	78.549	Meleagris_gallopavo
ENSSSCG00000015620	-	90	87.261	ENSMICG00000037857	TIAL1	100	87.059	Microcebus_murinus
ENSSSCG00000015620	-	89	86.624	ENSMOCG00000014244	Tial1	99	85.804	Microtus_ochrogaster
ENSSSCG00000015620	-	90	83.758	ENSMODG00000008865	TIAL1	97	80.442	Monodelphis_domestica
ENSSSCG00000015620	-	89	65.079	ENSMALG00000007782	TIAL1	92	63.836	Monopterus_albus
ENSSSCG00000015620	-	89	86.624	MGP_CAROLIEiJ_G0030548	Tial1	95	90.099	Mus_caroli
ENSSSCG00000015620	-	90	85.830	ENSMUSG00000030846	Tial1	100	85.830	Mus_musculus
ENSSSCG00000015620	-	89	86.624	MGP_PahariEiJ_G0013755	Tial1	95	90.099	Mus_pahari
ENSSSCG00000015620	-	89	86.624	MGP_SPRETEiJ_G0031662	Tial1	95	90.099	Mus_spretus
ENSSSCG00000015620	-	90	87.261	ENSMPUG00000003060	TIAL1	97	86.435	Mustela_putorius_furo
ENSSSCG00000015620	-	90	87.261	ENSMLUG00000004645	TIAL1	97	86.435	Myotis_lucifugus
ENSSSCG00000015620	-	90	86.943	ENSNGAG00000020427	Tial1	100	86.235	Nannospalax_galili
ENSSSCG00000015620	-	90	87.261	ENSNLEG00000016743	TIAL1	100	87.261	Nomascus_leucogenys
ENSSSCG00000015620	-	89	73.885	ENSMEUG00000013120	TIAL1	82	70.662	Notamacropus_eugenii
ENSSSCG00000015620	-	90	86.901	ENSODEG00000017741	TIAL1	97	86.076	Octodon_degus
ENSSSCG00000015620	-	90	83.439	ENSOANG00000004896	-	90	80.442	Ornithorhynchus_anatinus
ENSSSCG00000015620	-	90	87.261	ENSOCUG00000003783	TIAL1	97	86.435	Oryctolagus_cuniculus
ENSSSCG00000015620	-	73	65.019	ENSOMEG00000016815	TIAL1	89	68.240	Oryzias_melastigma
ENSSSCG00000015620	-	90	87.261	ENSOGAG00000011417	TIAL1	97	86.435	Otolemur_garnettii
ENSSSCG00000015620	-	90	87.261	ENSOARG00000002680	TIAL1	97	86.435	Ovis_aries
ENSSSCG00000015620	-	90	87.261	ENSPPAG00000043098	TIAL1	100	87.059	Pan_paniscus
ENSSSCG00000015620	-	90	87.261	ENSPPRG00000003226	TIAL1	97	86.435	Panthera_pardus
ENSSSCG00000015620	-	90	87.261	ENSPTIG00000007899	TIAL1	97	86.435	Panthera_tigris_altaica
ENSSSCG00000015620	-	90	87.059	ENSPTRG00000002996	TIAL1	100	87.059	Pan_troglodytes
ENSSSCG00000015620	-	90	87.261	ENSPANG00000020518	TIAL1	100	87.059	Papio_anubis
ENSSSCG00000015620	-	89	86.624	ENSPEMG00000014538	Tial1	97	85.804	Peromyscus_maniculatus_bairdii
ENSSSCG00000015620	-	90	84.076	ENSPCIG00000003120	TIAL1	98	80.757	Phascolarctos_cinereus
ENSSSCG00000015620	-	90	87.059	ENSPPYG00000002703	TIAL1	100	87.059	Pongo_abelii
ENSSSCG00000015620	-	90	86.667	ENSPCAG00000003192	TIAL1	97	85.849	Procavia_capensis
ENSSSCG00000015620	-	90	87.261	ENSPCOG00000018990	TIAL1	97	86.435	Propithecus_coquereli
ENSSSCG00000015620	-	90	86.943	ENSPVAG00000017585	TIAL1	97	86.120	Pteropus_vampyrus
ENSSSCG00000015620	-	89	86.624	ENSRNOG00000020271	Tial1	97	85.804	Rattus_norvegicus
ENSSSCG00000015620	-	90	87.261	ENSRBIG00000027702	TIAL1	100	87.059	Rhinopithecus_bieti
ENSSSCG00000015620	-	90	87.059	ENSRROG00000043377	TIAL1	100	87.059	Rhinopithecus_roxellana
ENSSSCG00000015620	-	90	87.261	ENSSBOG00000028408	TIAL1	100	87.261	Saimiri_boliviensis_boliviensis
ENSSSCG00000015620	-	90	83.758	ENSSHAG00000012508	TIAL1	97	79.811	Sarcophilus_harrisii
ENSSSCG00000015620	-	90	87.261	ENSSARG00000012980	TIAL1	84	86.435	Sorex_araneus
ENSSSCG00000015620	-	90	82.166	ENSSPUG00000002412	TIAL1	90	89.697	Sphenodon_punctatus
ENSSSCG00000015620	-	90	83.758	ENSTGUG00000011148	TIAL1	100	80.757	Taeniopygia_guttata
ENSSSCG00000015620	-	89	66.975	ENSTRUG00000020927	TIAL1	82	65.635	Takifugu_rubripes
ENSSSCG00000015620	-	77	70.850	ENSTNIG00000013091	TIAL1	72	70.850	Tetraodon_nigroviridis
ENSSSCG00000015620	-	90	86.943	ENSTTRG00000014574	TIAL1	82	86.120	Tursiops_truncatus
ENSSSCG00000015620	-	89	91.758	ENSUAMG00000009532	TIAL1	99	90.270	Ursus_americanus
ENSSSCG00000015620	-	90	87.261	ENSUMAG00000003207	TIAL1	97	86.435	Ursus_maritimus
ENSSSCG00000015620	-	92	83.951	ENSVPAG00000001240	TIAL1	91	83.951	Vicugna_pacos
ENSSSCG00000015620	-	89	87.261	ENSVVUG00000011029	TIAL1	97	86.435	Vulpes_vulpes
ENSSSCG00000015620	-	89	79.618	ENSXETG00000010234	tial1	94	76.341	Xenopus_tropicalis