EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000015721 (Gene tree)
Gene ID: 100517918
Gene Symbol: ERCC3
Alias: BTF2|GTF2H|RAD25|TFIIH|XPB
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 36773 bases
Position: chr15:25189207-25225979
Accession: 100517918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000045988	ResIII	PF04851.15	1.8e-15	1	1
ENSSSCP00000016661	ResIII	PF04851.15	2.3e-15	1	1
ENSSSCP00000043650	ResIII	PF04851.15	2.3e-15	1	1
ENSSSCP00000036130	ResIII	PF04851.15	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000063888	ERCC3-204	4473	-	ENSSSCP00000043650	720 (aa)	-	A0A287AID6
ENSSSCT00000041629	ERCC3-202	2618	-	ENSSSCP00000045988	703 (aa)	-	A0A287AQ31
ENSSSCT00000043306	ERCC3-201	2690	-	ENSSSCP00000036130	727 (aa)	-	A0A286ZWS1
ENSSSCT00000017121	ERCC3-203	4322	XM_003133288	ENSSSCP00000016661	782 (aa)	XP_003133336	F1RXZ5

Gene Model

Click here to download ENSSSCG00000015721's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03022	Basal transcription factors	KEGG
ssc03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015721	ERCC3	100	98.400	ENSG00000163161	ERCC3	99	100.000	Homo_sapiens
ENSSSCG00000015721	ERCC3	100	89.666	ENSAPOG00000014383	ercc3	100	88.168	Acanthochromis_polyacanthus
ENSSSCG00000015721	ERCC3	100	98.240	ENSAMEG00000016840	ERCC3	100	97.570	Ailuropoda_melanoleuca
ENSSSCG00000015721	ERCC3	99	93.137	ENSACIG00000000126	ercc3	98	87.847	Amphilophus_citrinellus
ENSSSCG00000015721	ERCC3	100	89.348	ENSAOCG00000009396	ercc3	100	88.041	Amphiprion_ocellaris
ENSSSCG00000015721	ERCC3	100	89.348	ENSAPEG00000023077	ercc3	100	88.041	Amphiprion_percula
ENSSSCG00000015721	ERCC3	100	88.553	ENSATEG00000014860	ercc3	100	87.659	Anabas_testudineus
ENSSSCG00000015721	ERCC3	90	92.938	ENSAPLG00000012068	ERCC3	98	92.938	Anas_platyrhynchos
ENSSSCG00000015721	ERCC3	92	93.046	ENSACAG00000009919	ERCC3	100	93.046	Anolis_carolinensis
ENSSSCG00000015721	ERCC3	100	98.560	ENSANAG00000031091	ERCC3	100	98.082	Aotus_nancymaae
ENSSSCG00000015721	ERCC3	100	88.394	ENSACLG00000022508	ercc3	100	86.768	Astatotilapia_calliptera
ENSSSCG00000015721	ERCC3	100	88.676	ENSAMXG00000036947	ercc3	100	86.990	Astyanax_mexicanus
ENSSSCG00000015721	ERCC3	100	98.720	ENSBTAG00000020777	ERCC3	100	98.082	Bos_taurus
ENSSSCG00000015721	ERCC3	98	67.978	WBGene00013441	xpb-1	97	64.479	Caenorhabditis_elegans
ENSSSCG00000015721	ERCC3	100	98.560	ENSCJAG00000010416	ERCC3	100	97.954	Callithrix_jacchus
ENSSSCG00000015721	ERCC3	100	99.200	ENSCAFG00000004497	ERCC3	100	98.210	Canis_familiaris
ENSSSCG00000015721	ERCC3	100	99.200	ENSCAFG00020003495	ERCC3	100	98.210	Canis_lupus_dingo
ENSSSCG00000015721	ERCC3	100	98.720	ENSCHIG00000014551	ERCC3	100	98.210	Capra_hircus
ENSSSCG00000015721	ERCC3	99	97.760	ENSTSYG00000004137	ERCC3	99	96.378	Carlito_syrichta
ENSSSCG00000015721	ERCC3	87	89.344	ENSCAPG00000017027	ERCC3	93	89.344	Cavia_aperea
ENSSSCG00000015721	ERCC3	100	98.400	ENSCPOG00000002144	ERCC3	100	96.675	Cavia_porcellus
ENSSSCG00000015721	ERCC3	100	98.560	ENSCCAG00000024421	ERCC3	100	98.082	Cebus_capucinus
ENSSSCG00000015721	ERCC3	100	98.720	ENSCATG00000032313	ERCC3	100	98.210	Cercocebus_atys
ENSSSCG00000015721	ERCC3	100	98.080	ENSCLAG00000002965	ERCC3	96	96.931	Chinchilla_lanigera
ENSSSCG00000015721	ERCC3	100	98.720	ENSCSAG00000016827	ERCC3	100	98.082	Chlorocebus_sabaeus
ENSSSCG00000015721	ERCC3	83	97.076	ENSCHOG00000007414	ERCC3	83	97.076	Choloepus_hoffmanni
ENSSSCG00000015721	ERCC3	92	93.185	ENSCPBG00000013638	ERCC3	100	93.185	Chrysemys_picta_bellii
ENSSSCG00000015721	ERCC3	95	74.448	ENSCING00000002867	ercc3	96	72.215	Ciona_intestinalis
ENSSSCG00000015721	ERCC3	100	98.560	ENSCANG00000007094	ERCC3	100	97.954	Colobus_angolensis_palliatus
ENSSSCG00000015721	ERCC3	100	97.760	ENSCGRG00001009426	Ercc3	100	96.931	Cricetulus_griseus_chok1gshd
ENSSSCG00000015721	ERCC3	97	96.849	ENSCGRG00000015547	Ercc3	100	96.184	Cricetulus_griseus_crigri
ENSSSCG00000015721	ERCC3	100	87.937	ENSCSEG00000016479	ercc3	100	86.277	Cynoglossus_semilaevis
ENSSSCG00000015721	ERCC3	100	89.348	ENSCVAG00000015177	ercc3	100	87.405	Cyprinodon_variegatus
ENSSSCG00000015721	ERCC3	95	92.941	ENSDARG00000002402	ercc3	100	86.752	Danio_rerio
ENSSSCG00000015721	ERCC3	63	98.413	ENSDNOG00000035027	ERCC3	95	98.413	Dasypus_novemcinctus
ENSSSCG00000015721	ERCC3	100	98.080	ENSDORG00000004671	Ercc3	100	97.187	Dipodomys_ordii
ENSSSCG00000015721	ERCC3	99	76.023	FBgn0001179	hay	94	70.658	Drosophila_melanogaster
ENSSSCG00000015721	ERCC3	100	97.444	ENSETEG00000019887	ERCC3	90	97.444	Echinops_telfairi
ENSSSCG00000015721	ERCC3	100	89.216	ENSEBUG00000009773	ercc3	96	82.129	Eptatretus_burgeri
ENSSSCG00000015721	ERCC3	100	99.520	ENSEASG00005022466	ERCC3	100	96.135	Equus_asinus_asinus
ENSSSCG00000015721	ERCC3	100	99.520	ENSECAG00000006589	ERCC3	100	98.593	Equus_caballus
ENSSSCG00000015721	ERCC3	93	98.925	ENSEEUG00000001057	ERCC3	99	95.736	Erinaceus_europaeus
ENSSSCG00000015721	ERCC3	100	86.984	ENSELUG00000000089	ercc3	99	86.277	Esox_lucius
ENSSSCG00000015721	ERCC3	100	98.720	ENSFCAG00000006989	ERCC3	100	98.210	Felis_catus
ENSSSCG00000015721	ERCC3	98	94.249	ENSFALG00000003936	ERCC3	98	91.667	Ficedula_albicollis
ENSSSCG00000015721	ERCC3	100	97.120	ENSFDAG00000011924	ERCC3	100	96.292	Fukomys_damarensis
ENSSSCG00000015721	ERCC3	100	88.871	ENSFHEG00000005185	ercc3	100	87.405	Fundulus_heteroclitus
ENSSSCG00000015721	ERCC3	100	86.124	ENSGMOG00000018032	ercc3	99	84.821	Gadus_morhua
ENSSSCG00000015721	ERCC3	98	92.652	ENSGALG00000011515	ERCC3	99	92.159	Gallus_gallus
ENSSSCG00000015721	ERCC3	100	93.922	ENSGAFG00000011936	ercc3	100	87.150	Gambusia_affinis
ENSSSCG00000015721	ERCC3	99	92.745	ENSGACG00000015218	ercc3	100	86.260	Gasterosteus_aculeatus
ENSSSCG00000015721	ERCC3	92	93.324	ENSGAGG00000018579	ERCC3	100	93.324	Gopherus_agassizii
ENSSSCG00000015721	ERCC3	100	98.560	ENSGGOG00000015255	ERCC3	100	98.082	Gorilla_gorilla
ENSSSCG00000015721	ERCC3	100	88.394	ENSHBUG00000003818	ercc3	100	86.768	Haplochromis_burtoni
ENSSSCG00000015721	ERCC3	100	98.560	ENSHGLG00000011014	ERCC3	100	97.442	Heterocephalus_glaber_female
ENSSSCG00000015721	ERCC3	100	98.560	ENSHGLG00100013806	ERCC3	100	97.442	Heterocephalus_glaber_male
ENSSSCG00000015721	ERCC3	100	87.739	ENSHCOG00000016924	ercc3	100	86.497	Hippocampus_comes
ENSSSCG00000015721	ERCC3	100	89.331	ENSIPUG00000021000	ercc3	100	87.516	Ictalurus_punctatus
ENSSSCG00000015721	ERCC3	100	98.240	ENSSTOG00000011001	ERCC3	100	97.698	Ictidomys_tridecemlineatus
ENSSSCG00000015721	ERCC3	90	96.028	ENSJJAG00000001117	Ercc3	100	96.028	Jaculus_jaculus
ENSSSCG00000015721	ERCC3	100	93.922	ENSKMAG00000021764	ercc3	100	87.913	Kryptolebias_marmoratus
ENSSSCG00000015721	ERCC3	100	87.898	ENSLBEG00000000468	ercc3	100	86.624	Labrus_bergylta
ENSSSCG00000015721	ERCC3	98	86.677	ENSLACG00000014815	ERCC3	100	85.912	Latimeria_chalumnae
ENSSSCG00000015721	ERCC3	91	85.023	ENSLOCG00000010907	ercc3	92	81.283	Lepisosteus_oculatus
ENSSSCG00000015721	ERCC3	100	98.080	ENSLAFG00000014866	ERCC3	100	97.442	Loxodonta_africana
ENSSSCG00000015721	ERCC3	100	98.720	ENSMFAG00000003370	ERCC3	100	98.210	Macaca_fascicularis
ENSSSCG00000015721	ERCC3	100	94.872	ENSMNEG00000004215	ERCC3	100	94.192	Macaca_nemestrina
ENSSSCG00000015721	ERCC3	100	98.720	ENSMLEG00000042061	ERCC3	100	98.210	Mandrillus_leucophaeus
ENSSSCG00000015721	ERCC3	100	89.030	ENSMAMG00000004505	ercc3	99	87.023	Mastacembelus_armatus
ENSSSCG00000015721	ERCC3	100	88.394	ENSMZEG00005004854	ercc3	100	86.768	Maylandia_zebra
ENSSSCG00000015721	ERCC3	90	93.191	ENSMGAG00000011706	ERCC3	100	93.191	Meleagris_gallopavo
ENSSSCG00000015721	ERCC3	100	97.280	ENSMAUG00000004515	Ercc3	100	96.296	Mesocricetus_auratus
ENSSSCG00000015721	ERCC3	100	98.560	ENSMICG00000009578	ERCC3	100	97.826	Microcebus_murinus
ENSSSCG00000015721	ERCC3	100	97.440	ENSMOCG00000021767	Ercc3	100	96.547	Microtus_ochrogaster
ENSSSCG00000015721	ERCC3	98	87.879	ENSMMOG00000018174	ercc3	97	87.302	Mola_mola
ENSSSCG00000015721	ERCC3	100	96.166	ENSMODG00000018695	ERCC3	100	95.275	Monodelphis_domestica
ENSSSCG00000015721	ERCC3	100	88.712	ENSMALG00000014944	ercc3	100	86.768	Monopterus_albus
ENSSSCG00000015721	ERCC3	100	97.280	MGP_CAROLIEiJ_G0022075	Ercc3	100	96.292	Mus_caroli
ENSSSCG00000015721	ERCC3	100	96.486	ENSMUSG00000024382	Ercc3	100	95.658	Mus_musculus
ENSSSCG00000015721	ERCC3	100	97.280	MGP_PahariEiJ_G0018809	Ercc3	100	96.547	Mus_pahari
ENSSSCG00000015721	ERCC3	100	96.805	MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	Mus_spretus
ENSSSCG00000015721	ERCC3	100	99.200	ENSMPUG00000012021	ERCC3	100	98.593	Mustela_putorius_furo
ENSSSCG00000015721	ERCC3	88	98.413	ENSMLUG00000007429	ERCC3	99	92.956	Myotis_lucifugus
ENSSSCG00000015721	ERCC3	96	97.678	ENSNGAG00000019598	Ercc3	100	97.700	Nannospalax_galili
ENSSSCG00000015721	ERCC3	100	88.394	ENSNBRG00000019074	ercc3	100	86.768	Neolamprologus_brichardi
ENSSSCG00000015721	ERCC3	92	95.670	ENSNLEG00000015665	ERCC3	97	95.670	Nomascus_leucogenys
ENSSSCG00000015721	ERCC3	98	96.711	ENSOPRG00000004553	ERCC3	100	94.118	Ochotona_princeps
ENSSSCG00000015721	ERCC3	100	98.400	ENSODEG00000005795	ERCC3	100	97.570	Octodon_degus
ENSSSCG00000015721	ERCC3	100	88.235	ENSONIG00000003255	ercc3	100	86.768	Oreochromis_niloticus
ENSSSCG00000015721	ERCC3	100	98.560	ENSOCUG00000002248	ERCC3	100	98.082	Oryctolagus_cuniculus
ENSSSCG00000015721	ERCC3	100	92.745	ENSORLG00000004393	ercc3	100	86.260	Oryzias_latipes
ENSSSCG00000015721	ERCC3	100	92.745	ENSORLG00020017718	ercc3	100	87.150	Oryzias_latipes_hni
ENSSSCG00000015721	ERCC3	100	92.745	ENSORLG00015015695	ercc3	100	86.260	Oryzias_latipes_hsok
ENSSSCG00000015721	ERCC3	100	88.394	ENSOMEG00000015374	ercc3	100	86.896	Oryzias_melastigma
ENSSSCG00000015721	ERCC3	100	98.246	ENSOGAG00000009103	ERCC3	100	97.577	Otolemur_garnettii
ENSSSCG00000015721	ERCC3	100	98.720	ENSOARG00000016147	ERCC3	100	98.082	Ovis_aries
ENSSSCG00000015721	ERCC3	100	98.560	ENSPPAG00000036166	ERCC3	100	98.082	Pan_paniscus
ENSSSCG00000015721	ERCC3	100	98.880	ENSPPRG00000001305	ERCC3	100	98.338	Panthera_pardus
ENSSSCG00000015721	ERCC3	92	98.747	ENSPTIG00000016969	ERCC3	100	98.747	Panthera_tigris_altaica
ENSSSCG00000015721	ERCC3	100	98.560	ENSPTRG00000046940	ERCC3	100	98.082	Pan_troglodytes
ENSSSCG00000015721	ERCC3	100	98.720	ENSPANG00000007699	ERCC3	100	98.210	Papio_anubis
ENSSSCG00000015721	ERCC3	100	88.571	ENSPKIG00000001319	ercc3	100	87.675	Paramormyrops_kingsleyae
ENSSSCG00000015721	ERCC3	92	93.185	ENSPSIG00000014682	ERCC3	100	93.185	Pelodiscus_sinensis
ENSSSCG00000015721	ERCC3	96	90.271	ENSPMGG00000017885	ercc3	99	88.520	Periophthalmus_magnuspinnatus
ENSSSCG00000015721	ERCC3	100	97.760	ENSPEMG00000013733	Ercc3	100	96.931	Peromyscus_maniculatus_bairdii
ENSSSCG00000015721	ERCC3	89	80.851	ENSPMAG00000005081	ercc3	99	78.322	Petromyzon_marinus
ENSSSCG00000015721	ERCC3	100	96.166	ENSPCIG00000011821	ERCC3	100	95.402	Phascolarctos_cinereus
ENSSSCG00000015721	ERCC3	96	89.030	ENSPFOG00000015604	ercc3	99	87.821	Poecilia_formosa
ENSSSCG00000015721	ERCC3	96	86.148	ENSPLAG00000022245	ercc3	100	88.920	Poecilia_latipinna
ENSSSCG00000015721	ERCC3	96	89.030	ENSPMEG00000016987	ercc3	99	87.821	Poecilia_mexicana
ENSSSCG00000015721	ERCC3	100	93.922	ENSPREG00000020921	ercc3	100	87.659	Poecilia_reticulata
ENSSSCG00000015721	ERCC3	100	97.318	ENSPPYG00000012769	ERCC3	100	97.318	Pongo_abelii
ENSSSCG00000015721	ERCC3	100	98.880	ENSPCOG00000024903	ERCC3	100	98.210	Propithecus_coquereli
ENSSSCG00000015721	ERCC3	90	96.094	ENSPVAG00000013774	ERCC3	90	96.094	Pteropus_vampyrus
ENSSSCG00000015721	ERCC3	100	88.394	ENSPNYG00000001208	ercc3	100	86.768	Pundamilia_nyererei
ENSSSCG00000015721	ERCC3	100	89.013	ENSPNAG00000005748	ercc3	100	87.643	Pygocentrus_nattereri
ENSSSCG00000015721	ERCC3	100	97.120	ENSRNOG00000013180	Ercc3	100	96.292	Rattus_norvegicus
ENSSSCG00000015721	ERCC3	100	98.560	ENSRBIG00000027692	ERCC3	100	97.954	Rhinopithecus_bieti
ENSSSCG00000015721	ERCC3	100	98.560	ENSRROG00000040673	ERCC3	100	97.954	Rhinopithecus_roxellana
ENSSSCG00000015721	ERCC3	91	56.425	YIL143C	SSL2	85	56.425	Saccharomyces_cerevisiae
ENSSSCG00000015721	ERCC3	100	98.240	ENSSBOG00000023079	ERCC3	100	97.826	Saimiri_boliviensis_boliviensis
ENSSSCG00000015721	ERCC3	100	95.847	ENSSHAG00000007423	ERCC3	100	94.764	Sarcophilus_harrisii
ENSSSCG00000015721	ERCC3	96	88.742	ENSSFOG00015012753	ercc3	100	87.643	Scleropages_formosus
ENSSSCG00000015721	ERCC3	100	87.599	ENSSMAG00000011915	ercc3	100	86.005	Scophthalmus_maximus
ENSSSCG00000015721	ERCC3	100	88.413	ENSSDUG00000021181	ercc3	100	86.404	Seriola_dumerili
ENSSSCG00000015721	ERCC3	100	88.413	ENSSLDG00000008744	ercc3	98	86.658	Seriola_lalandi_dorsalis
ENSSSCG00000015721	ERCC3	71	77.495	ENSSARG00000000751	-	100	77.495	Sorex_araneus
ENSSSCG00000015721	ERCC3	90	92.057	ENSSPUG00000015183	ERCC3	91	92.057	Sphenodon_punctatus
ENSSSCG00000015721	ERCC3	100	89.348	ENSSPAG00000004748	ercc3	100	87.786	Stegastes_partitus
ENSSSCG00000015721	ERCC3	99	93.610	ENSTGUG00000004920	-	100	93.411	Taeniopygia_guttata
ENSSSCG00000015721	ERCC3	100	88.694	ENSTRUG00000017185	ercc3	100	86.752	Takifugu_rubripes
ENSSSCG00000015721	ERCC3	96	94.083	ENSTNIG00000005457	ercc3	99	86.490	Tetraodon_nigroviridis
ENSSSCG00000015721	ERCC3	89	97.440	ENSTBEG00000009381	ERCC3	81	97.440	Tupaia_belangeri
ENSSSCG00000015721	ERCC3	75	99.053	ENSUAMG00000009589	-	100	99.053	Ursus_americanus
ENSSSCG00000015721	ERCC3	100	98.720	ENSUMAG00000008361	ERCC3	100	98.210	Ursus_maritimus
ENSSSCG00000015721	ERCC3	92	99.164	ENSVVUG00000010431	ERCC3	100	99.164	Vulpes_vulpes
ENSSSCG00000015721	ERCC3	100	91.561	ENSXETG00000033646	ercc3	100	90.204	Xenopus_tropicalis
ENSSSCG00000015721	ERCC3	99	88.553	ENSXCOG00000001791	ercc3	97	88.360	Xiphophorus_couchianus
ENSSSCG00000015721	ERCC3	100	94.118	ENSXMAG00000003641	ercc3	100	87.405	Xiphophorus_maculatus