EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000015729 (Gene tree)
Gene ID: 100519802
Gene Symbol: TSN
Alias: BCLF-1|REHF-1|TRSLN
Full Name: translin
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 9601 bases
Position: chr15:29704501-29714101
Accession: 100519802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000031158	Translin	PF01997.16	5.8e-56	1	1
ENSSSCP00000016669	Translin	PF01997.16	1e-53	1	1
ENSSSCP00000049341	Translin	PF01997.16	1.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000017129	TSN-203	2777	-	ENSSSCP00000016669	214 (aa)	-	F1RXY7
ENSSSCT00000044192	TSN-202	3784	-	ENSSSCP00000049341	206 (aa)	-	A0A287AYW6
ENSSSCT00000058214	TSN-201	3379	XM_005671638	ENSSSCP00000031158	228 (aa)	XP_005671695	A0A286ZHZ3

Gene Model

Click here to download ENSSSCG00000015729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015729	TSN	100	98.246	ENSG00000211460	TSN	100	98.246	Homo_sapiens
ENSSSCG00000015729	TSN	98	80.198	ENSAPOG00000002063	tsn	99	78.571	Acanthochromis_polyacanthus
ENSSSCG00000015729	TSN	100	98.684	ENSAMEG00000005055	TSN	100	98.684	Ailuropoda_melanoleuca
ENSSSCG00000015729	TSN	98	81.683	ENSACIG00000021694	tsn	99	79.911	Amphilophus_citrinellus
ENSSSCG00000015729	TSN	98	80.198	ENSAOCG00000015574	tsn	99	80.198	Amphiprion_ocellaris
ENSSSCG00000015729	TSN	98	80.198	ENSAPEG00000001677	tsn	99	78.571	Amphiprion_percula
ENSSSCG00000015729	TSN	97	80.905	ENSATEG00000004115	tsn	97	79.808	Anabas_testudineus
ENSSSCG00000015729	TSN	93	85.787	ENSACAG00000004757	TSN	99	84.018	Anolis_carolinensis
ENSSSCG00000015729	TSN	100	98.246	ENSANAG00000026842	TSN	100	98.246	Aotus_nancymaae
ENSSSCG00000015729	TSN	98	81.188	ENSACLG00000020831	tsn	99	79.911	Astatotilapia_calliptera
ENSSSCG00000015729	TSN	98	79.703	ENSAMXG00000035417	tsn	99	77.679	Astyanax_mexicanus
ENSSSCG00000015729	TSN	100	98.684	ENSBTAG00000006059	TSN	100	98.684	Bos_taurus
ENSSSCG00000015729	TSN	100	97.807	ENSCJAG00000044533	-	100	97.807	Callithrix_jacchus
ENSSSCG00000015729	TSN	50	89.381	ENSCJAG00000008511	-	88	89.381	Callithrix_jacchus
ENSSSCG00000015729	TSN	100	98.246	ENSCJAG00000047222	-	100	98.246	Callithrix_jacchus
ENSSSCG00000015729	TSN	99	98.678	ENSCAFG00000004700	TSN	94	98.678	Canis_familiaris
ENSSSCG00000015729	TSN	100	98.684	ENSCAFG00020011747	TSN	100	98.684	Canis_lupus_dingo
ENSSSCG00000015729	TSN	100	98.684	ENSCHIG00000010715	TSN	100	98.684	Capra_hircus
ENSSSCG00000015729	TSN	100	98.246	ENSTSYG00000004395	TSN	100	98.246	Carlito_syrichta
ENSSSCG00000015729	TSN	100	79.612	ENSCAPG00000015595	TSN	81	79.612	Cavia_aperea
ENSSSCG00000015729	TSN	100	98.246	ENSCPOG00000035645	TSN	100	98.246	Cavia_porcellus
ENSSSCG00000015729	TSN	100	97.807	ENSCCAG00000026371	TSN	100	97.807	Cebus_capucinus
ENSSSCG00000015729	TSN	66	84.868	ENSCCAG00000034886	-	84	84.868	Cebus_capucinus
ENSSSCG00000015729	TSN	100	98.246	ENSCATG00000032155	TSN	100	98.246	Cercocebus_atys
ENSSSCG00000015729	TSN	100	98.246	ENSCLAG00000006171	TSN	100	98.246	Chinchilla_lanigera
ENSSSCG00000015729	TSN	100	98.246	ENSCSAG00000016712	TSN	100	98.246	Chlorocebus_sabaeus
ENSSSCG00000015729	TSN	66	87.417	ENSCPBG00000013741	-	80	87.417	Chrysemys_picta_bellii
ENSSSCG00000015729	TSN	97	77.889	ENSCPBG00000018116	-	96	76.018	Chrysemys_picta_bellii
ENSSSCG00000015729	TSN	94	46.667	ENSCING00000012612	-	99	45.161	Ciona_intestinalis
ENSSSCG00000015729	TSN	98	45.050	ENSCSAVG00000009485	-	99	43.498	Ciona_savignyi
ENSSSCG00000015729	TSN	100	98.246	ENSCANG00000041881	TSN	100	98.246	Colobus_angolensis_palliatus
ENSSSCG00000015729	TSN	100	97.807	ENSCGRG00001018233	Tsn	100	97.807	Cricetulus_griseus_chok1gshd
ENSSSCG00000015729	TSN	100	97.807	ENSCGRG00000008331	Tsn	100	97.807	Cricetulus_griseus_crigri
ENSSSCG00000015729	TSN	99	76.585	ENSCSEG00000005825	tsn	100	74.890	Cynoglossus_semilaevis
ENSSSCG00000015729	TSN	97	72.362	ENSCVAG00000022024	tsn	98	71.946	Cyprinodon_variegatus
ENSSSCG00000015729	TSN	98	81.188	ENSDARG00000041830	tsn	99	79.911	Danio_rerio
ENSSSCG00000015729	TSN	100	98.246	ENSDNOG00000025740	TSN	100	98.246	Dasypus_novemcinctus
ENSSSCG00000015729	TSN	100	98.246	ENSDORG00000026251	-	100	98.246	Dipodomys_ordii
ENSSSCG00000015729	TSN	95	54.872	FBgn0033528	trsn	91	52.778	Drosophila_melanogaster
ENSSSCG00000015729	TSN	100	98.684	ENSEASG00005004774	TSN	100	98.684	Equus_asinus_asinus
ENSSSCG00000015729	TSN	100	98.684	ENSECAG00000015930	TSN	100	98.684	Equus_caballus
ENSSSCG00000015729	TSN	84	97.701	ENSEEUG00000013935	TSN	100	97.701	Erinaceus_europaeus
ENSSSCG00000015729	TSN	98	81.592	ENSELUG00000007669	tsn	98	79.821	Esox_lucius
ENSSSCG00000015729	TSN	83	73.529	ENSFCAG00000022306	-	96	73.529	Felis_catus
ENSSSCG00000015729	TSN	100	98.684	ENSFCAG00000027149	TSN	100	98.684	Felis_catus
ENSSSCG00000015729	TSN	100	86.957	ENSFALG00000013247	TSN	96	83.258	Ficedula_albicollis
ENSSSCG00000015729	TSN	100	98.246	ENSFDAG00000012302	TSN	100	98.246	Fukomys_damarensis
ENSSSCG00000015729	TSN	97	81.407	ENSFHEG00000015531	tsn	97	79.638	Fundulus_heteroclitus
ENSSSCG00000015729	TSN	96	78.788	ENSGMOG00000009247	tsn	97	77.727	Gadus_morhua
ENSSSCG00000015729	TSN	100	86.957	ENSGALG00000011652	TSN	100	85.590	Gallus_gallus
ENSSSCG00000015729	TSN	96	81.818	ENSGAFG00000003816	tsn	97	80.000	Gambusia_affinis
ENSSSCG00000015729	TSN	97	80.402	ENSGACG00000000235	tsn	97	78.281	Gasterosteus_aculeatus
ENSSSCG00000015729	TSN	100	98.246	ENSGGOG00000002216	TSN	100	98.246	Gorilla_gorilla
ENSSSCG00000015729	TSN	98	80.198	ENSHBUG00000002340	tsn	84	79.018	Haplochromis_burtoni
ENSSSCG00000015729	TSN	100	98.246	ENSHGLG00000007038	TSN	100	98.246	Heterocephalus_glaber_female
ENSSSCG00000015729	TSN	100	98.246	ENSHGLG00100000069	TSN	100	98.246	Heterocephalus_glaber_male
ENSSSCG00000015729	TSN	97	80.905	ENSHCOG00000001756	tsn	98	79.186	Hippocampus_comes
ENSSSCG00000015729	TSN	98	80.693	ENSIPUG00000021370	tsn	99	79.464	Ictalurus_punctatus
ENSSSCG00000015729	TSN	100	98.246	ENSSTOG00000000972	TSN	100	98.246	Ictidomys_tridecemlineatus
ENSSSCG00000015729	TSN	100	97.368	ENSJJAG00000006730	Tsn	100	97.368	Jaculus_jaculus
ENSSSCG00000015729	TSN	96	82.828	ENSKMAG00000004996	tsn	97	80.909	Kryptolebias_marmoratus
ENSSSCG00000015729	TSN	98	80.198	ENSLBEG00000012620	tsn	99	78.571	Labrus_bergylta
ENSSSCG00000015729	TSN	98	59.031	ENSLACG00000005246	TSN	99	59.031	Latimeria_chalumnae
ENSSSCG00000015729	TSN	99	81.373	ENSLOCG00000002191	tsn	98	78.761	Lepisosteus_oculatus
ENSSSCG00000015729	TSN	100	91.667	ENSLAFG00000032428	TSN	100	91.667	Loxodonta_africana
ENSSSCG00000015729	TSN	100	98.246	ENSMFAG00000044217	TSN	100	98.246	Macaca_fascicularis
ENSSSCG00000015729	TSN	100	98.246	ENSMMUG00000021119	TSN	100	98.246	Macaca_mulatta
ENSSSCG00000015729	TSN	100	98.246	ENSMNEG00000040632	TSN	100	98.246	Macaca_nemestrina
ENSSSCG00000015729	TSN	54	99.194	ENSMLEG00000038656	TSN	96	99.194	Mandrillus_leucophaeus
ENSSSCG00000015729	TSN	97	81.407	ENSMAMG00000019536	tsn	97	80.090	Mastacembelus_armatus
ENSSSCG00000015729	TSN	98	81.188	ENSMZEG00005018715	tsn	84	79.911	Maylandia_zebra
ENSSSCG00000015729	TSN	83	84.884	ENSMGAG00000011956	TSN	88	84.884	Meleagris_gallopavo
ENSSSCG00000015729	TSN	100	98.058	ENSMAUG00000018800	Tsn	100	98.058	Mesocricetus_auratus
ENSSSCG00000015729	TSN	100	98.246	ENSMICG00000015793	TSN	100	98.246	Microcebus_murinus
ENSSSCG00000015729	TSN	100	96.930	ENSMOCG00000013248	Tsn	100	96.930	Microtus_ochrogaster
ENSSSCG00000015729	TSN	96	79.798	ENSMMOG00000019661	tsn	97	79.798	Mola_mola
ENSSSCG00000015729	TSN	100	92.576	ENSMODG00000000147	TSN	100	92.576	Monodelphis_domestica
ENSSSCG00000015729	TSN	98	81.188	ENSMALG00000001827	tsn	99	79.018	Monopterus_albus
ENSSSCG00000015729	TSN	100	97.368	ENSMUSG00000026374	Tsn	100	97.368	Mus_musculus
ENSSSCG00000015729	TSN	100	97.368	MGP_PahariEiJ_G0027742	Tsn	100	97.368	Mus_pahari
ENSSSCG00000015729	TSN	100	97.368	MGP_SPRETEiJ_G0015313	Tsn	100	97.368	Mus_spretus
ENSSSCG00000015729	TSN	100	98.684	ENSMPUG00000001056	TSN	100	98.684	Mustela_putorius_furo
ENSSSCG00000015729	TSN	59	30.496	ENSMLUG00000028551	-	83	30.496	Myotis_lucifugus
ENSSSCG00000015729	TSN	100	98.058	ENSMLUG00000012656	TSN	100	98.058	Myotis_lucifugus
ENSSSCG00000015729	TSN	100	97.807	ENSNGAG00000010353	Tsn	100	97.807	Nannospalax_galili
ENSSSCG00000015729	TSN	98	80.693	ENSNBRG00000001193	tsn	99	79.464	Neolamprologus_brichardi
ENSSSCG00000015729	TSN	100	98.246	ENSNLEG00000032773	TSN	100	98.246	Nomascus_leucogenys
ENSSSCG00000015729	TSN	100	71.930	ENSMEUG00000006228	TSN	100	71.930	Notamacropus_eugenii
ENSSSCG00000015729	TSN	69	76.761	ENSOPRG00000004858	-	100	76.761	Ochotona_princeps
ENSSSCG00000015729	TSN	100	98.246	ENSODEG00000008386	-	100	98.246	Octodon_degus
ENSSSCG00000015729	TSN	100	79.386	ENSODEG00000005998	-	100	79.386	Octodon_degus
ENSSSCG00000015729	TSN	98	81.188	ENSONIG00000017060	tsn	99	79.911	Oreochromis_niloticus
ENSSSCG00000015729	TSN	100	93.204	ENSOANG00000003457	TSN	100	93.237	Ornithorhynchus_anatinus
ENSSSCG00000015729	TSN	100	97.807	ENSOCUG00000023529	TSN	100	97.807	Oryctolagus_cuniculus
ENSSSCG00000015729	TSN	97	81.910	ENSORLG00000010049	tsn	97	80.543	Oryzias_latipes
ENSSSCG00000015729	TSN	63	75.000	ENSORLG00020017000	-	84	75.000	Oryzias_latipes_hni
ENSSSCG00000015729	TSN	97	81.407	ENSORLG00020016476	tsn	97	80.090	Oryzias_latipes_hni
ENSSSCG00000015729	TSN	97	81.407	ENSORLG00015019192	tsn	97	80.090	Oryzias_latipes_hsok
ENSSSCG00000015729	TSN	97	82.412	ENSOMEG00000016335	tsn	97	80.543	Oryzias_melastigma
ENSSSCG00000015729	TSN	100	98.246	ENSOGAG00000030436	TSN	100	98.246	Otolemur_garnettii
ENSSSCG00000015729	TSN	100	98.684	ENSOARG00000013339	TSN	100	98.684	Ovis_aries
ENSSSCG00000015729	TSN	100	98.246	ENSPPAG00000032878	TSN	100	98.246	Pan_paniscus
ENSSSCG00000015729	TSN	93	72.251	ENSPPRG00000004174	-	94	65.000	Panthera_pardus
ENSSSCG00000015729	TSN	100	98.684	ENSPPRG00000006531	TSN	99	98.684	Panthera_pardus
ENSSSCG00000015729	TSN	55	95.238	ENSPTIG00000012953	TSN	88	92.366	Panthera_tigris_altaica
ENSSSCG00000015729	TSN	100	98.246	ENSPTRG00000012420	TSN	100	98.246	Pan_troglodytes
ENSSSCG00000015729	TSN	100	98.246	ENSPANG00000000733	TSN	100	98.246	Papio_anubis
ENSSSCG00000015729	TSN	98	79.703	ENSPKIG00000002005	tsn	99	78.125	Paramormyrops_kingsleyae
ENSSSCG00000015729	TSN	85	87.429	ENSPSIG00000006064	TSN	96	87.429	Pelodiscus_sinensis
ENSSSCG00000015729	TSN	96	81.313	ENSPMGG00000015287	tsn	97	79.545	Periophthalmus_magnuspinnatus
ENSSSCG00000015729	TSN	97	69.849	ENSPMAG00000009161	tsn	95	66.968	Petromyzon_marinus
ENSSSCG00000015729	TSN	100	95.146	ENSPCIG00000023491	TSN	100	95.146	Phascolarctos_cinereus
ENSSSCG00000015729	TSN	96	82.323	ENSPFOG00000016063	tsn	97	80.455	Poecilia_formosa
ENSSSCG00000015729	TSN	96	82.323	ENSPLAG00000010654	tsn	97	80.455	Poecilia_latipinna
ENSSSCG00000015729	TSN	96	82.323	ENSPMEG00000023570	tsn	97	80.455	Poecilia_mexicana
ENSSSCG00000015729	TSN	96	82.323	ENSPREG00000003481	tsn	97	80.455	Poecilia_reticulata
ENSSSCG00000015729	TSN	100	98.246	ENSPPYG00000012774	TSN	100	98.246	Pongo_abelii
ENSSSCG00000015729	TSN	84	96.552	ENSPCAG00000003549	TSN	100	96.552	Procavia_capensis
ENSSSCG00000015729	TSN	100	98.246	ENSPCOG00000011045	TSN	100	98.246	Propithecus_coquereli
ENSSSCG00000015729	TSN	100	98.684	ENSPVAG00000016702	TSN	100	98.684	Pteropus_vampyrus
ENSSSCG00000015729	TSN	98	81.188	ENSPNYG00000012396	tsn	84	79.911	Pundamilia_nyererei
ENSSSCG00000015729	TSN	98	80.198	ENSPNAG00000018140	tsn	99	78.571	Pygocentrus_nattereri
ENSSSCG00000015729	TSN	100	97.807	ENSRNOG00000002319	Tsn	100	97.807	Rattus_norvegicus
ENSSSCG00000015729	TSN	100	98.246	ENSRBIG00000041316	TSN	100	98.246	Rhinopithecus_bieti
ENSSSCG00000015729	TSN	100	98.246	ENSRROG00000029954	TSN	100	98.246	Rhinopithecus_roxellana
ENSSSCG00000015729	TSN	100	98.246	ENSSBOG00000028579	TSN	100	98.246	Saimiri_boliviensis_boliviensis
ENSSSCG00000015729	TSN	82	80.749	ENSSBOG00000015719	-	83	94.040	Saimiri_boliviensis_boliviensis
ENSSSCG00000015729	TSN	100	95.631	ENSSHAG00000011707	TSN	100	95.614	Sarcophilus_harrisii
ENSSSCG00000015729	TSN	96	80.711	ENSSFOG00015020668	tsn	96	78.995	Scleropages_formosus
ENSSSCG00000015729	TSN	98	80.198	ENSSMAG00000005822	tsn	99	78.571	Scophthalmus_maximus
ENSSSCG00000015729	TSN	97	81.407	ENSSDUG00000011388	tsn	97	79.638	Seriola_dumerili
ENSSSCG00000015729	TSN	97	81.407	ENSSLDG00000008206	tsn	97	79.638	Seriola_lalandi_dorsalis
ENSSSCG00000015729	TSN	100	66.667	ENSSARG00000007193	-	100	66.667	Sorex_araneus
ENSSSCG00000015729	TSN	100	87.379	ENSSPUG00000017518	TSN	100	85.088	Sphenodon_punctatus
ENSSSCG00000015729	TSN	96	81.818	ENSSPAG00000009283	tsn	97	80.000	Stegastes_partitus
ENSSSCG00000015729	TSN	100	86.473	ENSTGUG00000004445	TSN	100	84.279	Taeniopygia_guttata
ENSSSCG00000015729	TSN	97	78.894	ENSTRUG00000013691	tsn	98	77.828	Takifugu_rubripes
ENSSSCG00000015729	TSN	97	77.889	ENSTNIG00000015707	tsn	97	76.923	Tetraodon_nigroviridis
ENSSSCG00000015729	TSN	100	98.246	ENSTBEG00000015319	TSN	100	98.246	Tupaia_belangeri
ENSSSCG00000015729	TSN	100	98.684	ENSTTRG00000005854	TSN	100	98.684	Tursiops_truncatus
ENSSSCG00000015729	TSN	100	98.684	ENSUAMG00000021618	TSN	100	98.684	Ursus_americanus
ENSSSCG00000015729	TSN	100	97.368	ENSUMAG00000008516	TSN	100	97.368	Ursus_maritimus
ENSSSCG00000015729	TSN	63	73.643	ENSVPAG00000009874	-	100	73.643	Vicugna_pacos
ENSSSCG00000015729	TSN	100	98.544	ENSVVUG00000027555	TSN	100	97.596	Vulpes_vulpes
ENSSSCG00000015729	TSN	100	78.641	ENSXETG00000000838	tsn	100	76.754	Xenopus_tropicalis
ENSSSCG00000015729	TSN	54	75.000	ENSXCOG00000018514	tsn	95	75.000	Xiphophorus_couchianus
ENSSSCG00000015729	TSN	96	82.323	ENSXMAG00000022538	tsn	97	80.455	Xiphophorus_maculatus