EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000015840 (Gene tree)
Gene ID: 100512139
Gene Symbol: WRN
Alias: RECQ3|RECQL2
Full Name: Werner syndrome RecQ like helicase
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 128025 bases
Position: chr15:53966973-54094997
Accession: 100512139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052700	HRDC	PF00570.23	6.7e-13	1	1
ENSSSCP00000053814	HRDC	PF00570.23	7.2e-13	1	1
ENSSSCP00000021665	HRDC	PF00570.23	7.4e-13	1	1
ENSSSCP00000033959	HRDC	PF00570.23	7.7e-13	1	1
ENSSSCP00000016786	HRDC	PF00570.23	7.9e-13	1	1
ENSSSCP00000052700	DEAD	PF00270.29	2.8e-16	1	1
ENSSSCP00000021665	DEAD	PF00270.29	3.1e-16	1	1
ENSSSCP00000033959	DEAD	PF00270.29	3.3e-16	1	1
ENSSSCP00000016786	DEAD	PF00270.29	3.5e-16	1	1
ENSSSCP00000053814	DEAD	PF00270.29	5.2e-16	1	1
ENSSSCP00000052700	DNA_pol_A_exo1	PF01612.20	1.3e-34	1	1
ENSSSCP00000053814	DNA_pol_A_exo1	PF01612.20	1.4e-34	1	1
ENSSSCP00000021665	DNA_pol_A_exo1	PF01612.20	1.4e-34	1	1
ENSSSCP00000033959	DNA_pol_A_exo1	PF01612.20	1.4e-34	1	1
ENSSSCP00000016786	DNA_pol_A_exo1	PF01612.20	1.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000022344	WRN-204	4895	-	ENSSSCP00000021665	1416 (aa)	-	I3LC91
ENSSSCT00000043230	WRN-201	6918	XM_021075782	ENSSSCP00000033959	1447 (aa)	XP_020931441	A0A286ZQR4
ENSSSCT00000061430	WRN-202	5522	-	ENSSSCP00000053814	1403 (aa)	-	A0A287BB97
ENSSSCT00000056627	WRN-205	5832	XM_021075788	ENSSSCP00000052700	1364 (aa)	XP_020931447	A0A287B847
ENSSSCT00000017248	WRN-203	4673	-	ENSSSCP00000016786	1466 (aa)	-	F1RX70

Gene Model

Click here to download ENSSSCG00000015840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000015840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000015840	WRN	100	76.450	ENSG00000165392	WRN	97	76.450	Homo_sapiens
ENSSSCG00000015840	WRN	80	78.662	ENSAMEG00000000475	-	97	74.707	Ailuropoda_melanoleuca
ENSSSCG00000015840	WRN	98	55.132	ENSAPLG00000001616	WRN	99	55.532	Anas_platyrhynchos
ENSSSCG00000015840	WRN	96	51.647	ENSACAG00000003109	WRN	99	51.961	Anolis_carolinensis
ENSSSCG00000015840	WRN	95	77.953	ENSANAG00000032806	WRN	99	77.611	Aotus_nancymaae
ENSSSCG00000015840	WRN	97	49.888	ENSAMXG00000010066	wrn	98	47.480	Astyanax_mexicanus
ENSSSCG00000015840	WRN	100	79.209	ENSBTAG00000021592	WRN	97	79.575	Bos_taurus
ENSSSCG00000015840	WRN	59	32.586	WBGene00006944	wrn-1	75	32.665	Caenorhabditis_elegans
ENSSSCG00000015840	WRN	100	76.648	ENSCJAG00000012511	WRN	97	76.504	Callithrix_jacchus
ENSSSCG00000015840	WRN	100	78.891	ENSCAFG00000006410	WRN	99	74.507	Canis_familiaris
ENSSSCG00000015840	WRN	100	77.705	ENSCAFG00020001236	WRN	97	77.558	Canis_lupus_dingo
ENSSSCG00000015840	WRN	100	79.649	ENSCHIG00000014991	WRN	97	79.868	Capra_hircus
ENSSSCG00000015840	WRN	100	78.305	ENSTSYG00000012689	WRN	97	78.305	Carlito_syrichta
ENSSSCG00000015840	WRN	92	68.328	ENSCAPG00000016803	WRN	98	68.622	Cavia_aperea
ENSSSCG00000015840	WRN	100	74.872	ENSCPOG00000002943	WRN	98	73.856	Cavia_porcellus
ENSSSCG00000015840	WRN	100	76.057	ENSCCAG00000023793	WRN	97	75.699	Cebus_capucinus
ENSSSCG00000015840	WRN	99	79.305	ENSCATG00000040557	WRN	99	78.963	Cercocebus_atys
ENSSSCG00000015840	WRN	99	75.572	ENSCLAG00000000817	WRN	99	73.857	Chinchilla_lanigera
ENSSSCG00000015840	WRN	99	77.520	ENSCSAG00000015810	WRN	99	77.133	Chlorocebus_sabaeus
ENSSSCG00000015840	WRN	73	90.608	ENSCHOG00000008966	WRN	74	90.608	Choloepus_hoffmanni
ENSSSCG00000015840	WRN	98	61.173	ENSCPBG00000013421	WRN	98	58.152	Chrysemys_picta_bellii
ENSSSCG00000015840	WRN	61	40.650	ENSCING00000002232	-	69	40.840	Ciona_intestinalis
ENSSSCG00000015840	WRN	99	77.520	ENSCANG00000037137	WRN	97	77.204	Colobus_angolensis_palliatus
ENSSSCG00000015840	WRN	99	72.854	ENSCGRG00001016491	Wrn	97	72.854	Cricetulus_griseus_chok1gshd
ENSSSCG00000015840	WRN	82	71.850	ENSCGRG00000016821	Wrn	99	69.218	Cricetulus_griseus_crigri
ENSSSCG00000015840	WRN	97	49.511	ENSDARG00000098211	wrn	98	47.159	Danio_rerio
ENSSSCG00000015840	WRN	95	77.360	ENSDNOG00000008481	WRN	99	76.419	Dasypus_novemcinctus
ENSSSCG00000015840	WRN	99	71.605	ENSDORG00000002696	Wrn	97	71.750	Dipodomys_ordii
ENSSSCG00000015840	WRN	80	82.775	ENSETEG00000019854	WRN	74	82.775	Echinops_telfairi
ENSSSCG00000015840	WRN	100	74.524	ENSEASG00005016813	WRN	98	82.746	Equus_asinus_asinus
ENSSSCG00000015840	WRN	100	79.283	ENSECAG00000000110	WRN	99	78.129	Equus_caballus
ENSSSCG00000015840	WRN	76	85.246	ENSEEUG00000004926	WRN	87	85.246	Erinaceus_europaeus
ENSSSCG00000015840	WRN	97	48.113	ENSELUG00000017817	wrn	94	56.481	Esox_lucius
ENSSSCG00000015840	WRN	100	75.288	ENSFCAG00000024759	WRN	97	75.288	Felis_catus
ENSSSCG00000015840	WRN	100	77.249	ENSFDAG00000008637	WRN	99	76.467	Fukomys_damarensis
ENSSSCG00000015840	WRN	99	56.853	ENSGALG00000040909	WRN	98	54.295	Gallus_gallus
ENSSSCG00000015840	WRN	99	60.586	ENSGAGG00000022647	WRN	98	59.597	Gopherus_agassizii
ENSSSCG00000015840	WRN	100	78.305	ENSGGOG00000022154	WRN	97	78.305	Gorilla_gorilla
ENSSSCG00000015840	WRN	99	76.358	ENSHGLG00000003638	WRN	97	76.285	Heterocephalus_glaber_female
ENSSSCG00000015840	WRN	97	48.992	ENSIPUG00000002090	wrn	98	46.575	Ictalurus_punctatus
ENSSSCG00000015840	WRN	100	77.997	ENSSTOG00000013599	WRN	99	76.706	Ictidomys_tridecemlineatus
ENSSSCG00000015840	WRN	99	72.006	ENSJJAG00000015655	Wrn	97	72.006	Jaculus_jaculus
ENSSSCG00000015840	WRN	98	51.632	ENSLACG00000001569	-	98	50.235	Latimeria_chalumnae
ENSSSCG00000015840	WRN	97	53.047	ENSLOCG00000010792	wrn	99	49.176	Lepisosteus_oculatus
ENSSSCG00000015840	WRN	99	78.451	ENSLAFG00000004434	WRN	97	78.451	Loxodonta_africana
ENSSSCG00000015840	WRN	99	79.231	ENSMFAG00000043428	WRN	98	78.251	Macaca_fascicularis
ENSSSCG00000015840	WRN	99	77.754	ENSMMUG00000022655	WRN	99	76.825	Macaca_mulatta
ENSSSCG00000015840	WRN	99	77.464	ENSMNEG00000032617	WRN	97	77.149	Macaca_nemestrina
ENSSSCG00000015840	WRN	100	79.255	ENSMLEG00000038296	WRN	97	79.109	Mandrillus_leucophaeus
ENSSSCG00000015840	WRN	97	56.848	ENSMGAG00000004960	WRN	97	53.650	Meleagris_gallopavo
ENSSSCG00000015840	WRN	99	73.074	ENSMAUG00000016235	Wrn	97	73.074	Mesocricetus_auratus
ENSSSCG00000015840	WRN	100	74.711	ENSMICG00000010630	WRN	97	74.711	Microcebus_murinus
ENSSSCG00000015840	WRN	98	72.024	ENSMOCG00000013972	Wrn	97	71.639	Microtus_ochrogaster
ENSSSCG00000015840	WRN	97	58.872	ENSMODG00000018997	WRN	98	57.910	Monodelphis_domestica
ENSSSCG00000015840	WRN	99	72.226	MGP_CAROLIEiJ_G0030961	Wrn	97	72.226	Mus_caroli
ENSSSCG00000015840	WRN	99	72.079	ENSMUSG00000031583	Wrn	97	72.153	Mus_musculus
ENSSSCG00000015840	WRN	99	72.006	MGP_PahariEiJ_G0021430	Wrn	97	72.006	Mus_pahari
ENSSSCG00000015840	WRN	99	72.373	MGP_SPRETEiJ_G0032079	Wrn	97	72.447	Mus_spretus
ENSSSCG00000015840	WRN	100	77.892	ENSMPUG00000010201	WRN	97	77.892	Mustela_putorius_furo
ENSSSCG00000015840	WRN	99	79.587	ENSMLUG00000005863	WRN	97	79.587	Myotis_lucifugus
ENSSSCG00000015840	WRN	99	74.853	ENSNGAG00000018413	Wrn	97	74.853	Nannospalax_galili
ENSSSCG00000015840	WRN	100	77.705	ENSNLEG00000012006	WRN	97	77.560	Nomascus_leucogenys
ENSSSCG00000015840	WRN	77	61.304	ENSMEUG00000008271	-	71	70.183	Notamacropus_eugenii
ENSSSCG00000015840	WRN	91	64.910	ENSOPRG00000001480	WRN	83	72.527	Ochotona_princeps
ENSSSCG00000015840	WRN	99	76.039	ENSODEG00000004076	WRN	97	75.771	Octodon_degus
ENSSSCG00000015840	WRN	92	64.434	ENSOANG00000005952	-	98	62.803	Ornithorhynchus_anatinus
ENSSSCG00000015840	WRN	100	77.624	ENSOCUG00000012620	WRN	88	77.624	Oryctolagus_cuniculus
ENSSSCG00000015840	WRN	99	74.123	ENSOGAG00000009600	WRN	99	74.288	Otolemur_garnettii
ENSSSCG00000015840	WRN	100	79.575	ENSOARG00000000163	WRN	97	79.795	Ovis_aries
ENSSSCG00000015840	WRN	100	77.883	ENSPPAG00000036871	WRN	97	77.883	Pan_paniscus
ENSSSCG00000015840	WRN	100	78.022	ENSPPRG00000010928	WRN	97	77.875	Panthera_pardus
ENSSSCG00000015840	WRN	100	78.095	ENSPTIG00000020609	WRN	97	77.949	Panthera_tigris_altaica
ENSSSCG00000015840	WRN	100	77.616	ENSPTRG00000020145	WRN	97	77.616	Pan_troglodytes
ENSSSCG00000015840	WRN	99	77.552	ENSPANG00000018594	WRN	100	75.978	Papio_anubis
ENSSSCG00000015840	WRN	78	66.667	ENSPKIG00000025497	wrn	94	66.667	Paramormyrops_kingsleyae
ENSSSCG00000015840	WRN	99	60.058	ENSPSIG00000013411	WRN	98	57.809	Pelodiscus_sinensis
ENSSSCG00000015840	WRN	99	70.830	ENSPEMG00000020615	Wrn	96	71.889	Peromyscus_maniculatus_bairdii
ENSSSCG00000015840	WRN	99	58.638	ENSPCIG00000020146	WRN	99	58.785	Phascolarctos_cinereus
ENSSSCG00000015840	WRN	100	76.450	ENSPPYG00000018494	WRN	97	76.450	Pongo_abelii
ENSSSCG00000015840	WRN	92	69.341	ENSPCAG00000013763	WRN	88	69.341	Procavia_capensis
ENSSSCG00000015840	WRN	81	65.476	ENSPCOG00000012938	WRN	98	66.369	Propithecus_coquereli
ENSSSCG00000015840	WRN	94	77.356	ENSPVAG00000012909	WRN	92	77.197	Pteropus_vampyrus
ENSSSCG00000015840	WRN	91	52.234	ENSPNAG00000021848	wrn	86	52.234	Pygocentrus_nattereri
ENSSSCG00000015840	WRN	99	71.733	ENSRNOG00000015440	Wrn	97	71.733	Rattus_norvegicus
ENSSSCG00000015840	WRN	99	78.402	ENSRBIG00000031825	WRN	99	78.037	Rhinopithecus_bieti
ENSSSCG00000015840	WRN	99	77.302	ENSRROG00000045381	WRN	97	76.846	Rhinopithecus_roxellana
ENSSSCG00000015840	WRN	100	76.416	ENSSBOG00000027238	WRN	97	76.129	Saimiri_boliviensis_boliviensis
ENSSSCG00000015840	WRN	97	61.492	ENSSHAG00000005577	WRN	98	60.204	Sarcophilus_harrisii
ENSSSCG00000015840	WRN	97	50.038	ENSSFOG00015006123	wrn	94	50.038	Scleropages_formosus
ENSSSCG00000015840	WRN	87	69.347	ENSSARG00000006157	WRN	84	69.347	Sorex_araneus
ENSSSCG00000015840	WRN	74	57.824	ENSTGUG00000001765	WRN	100	57.895	Taeniopygia_guttata
ENSSSCG00000015840	WRN	81	63.158	ENSTBEG00000012702	-	78	57.648	Tupaia_belangeri
ENSSSCG00000015840	WRN	100	77.835	ENSTTRG00000012302	WRN	97	78.127	Tursiops_truncatus
ENSSSCG00000015840	WRN	100	76.208	ENSUAMG00000021324	WRN	97	76.208	Ursus_americanus
ENSSSCG00000015840	WRN	88	76.226	ENSUMAG00000007159	WRN	99	74.959	Ursus_maritimus
ENSSSCG00000015840	WRN	99	76.636	ENSVPAG00000011004	WRN	97	76.276	Vicugna_pacos
ENSSSCG00000015840	WRN	100	78.436	ENSVVUG00000019867	WRN	99	77.816	Vulpes_vulpes
ENSSSCG00000015840	WRN	99	53.102	ENSXETG00000018302	wrn	99	55.008	Xenopus_tropicalis