EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000016226 (Gene tree)
Gene ID: 100524650
Gene Symbol: -
Alias: -
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 82772 bases
Position: chr15:124472219-124554990
Accession: 100524650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017189	B3_4	PF03483.17	1.7e-26	1	1
ENSSSCP00000027828	B3_4	PF03483.17	2e-26	1	1
ENSSSCP00000017189	B5	PF03484.15	5.3e-16	1	1
ENSSSCP00000027828	B5	PF03484.15	7.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000023908	-	1953	XM_021074819	ENSSSCP00000027828	589 (aa)	XP_020930478	I3LUM8
ENSSSCT00000017668	-	1770	XM_021074820	ENSSSCP00000017189	537 (aa)	XP_020930479	F1SR70

Gene Model

Click here to download ENSSSCG00000016226's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000016226	-	100	91.525	ENSSSCG00000032016	-	100	91.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016226	-	100	93.209	ENSG00000116120	FARSB	100	93.209	Homo_sapiens
ENSSSCG00000016226	-	100	75.424	ENSAPOG00000013072	farsb	100	71.695	Acanthochromis_polyacanthus
ENSSSCG00000016226	-	100	93.548	ENSAMEG00000005984	FARSB	100	93.548	Ailuropoda_melanoleuca
ENSSSCG00000016226	-	100	73.898	ENSACIG00000021623	farsb	100	73.898	Amphilophus_citrinellus
ENSSSCG00000016226	-	100	74.746	ENSAOCG00000004912	farsb	100	72.203	Amphiprion_ocellaris
ENSSSCG00000016226	-	100	74.915	ENSAPEG00000001153	farsb	100	71.186	Amphiprion_percula
ENSSSCG00000016226	-	100	76.441	ENSATEG00000021441	farsb	70	76.441	Anabas_testudineus
ENSSSCG00000016226	-	99	81.164	ENSAPLG00000010292	FARSB	99	81.164	Anas_platyrhynchos
ENSSSCG00000016226	-	100	81.186	ENSACAG00000004769	FARSB	98	81.186	Anolis_carolinensis
ENSSSCG00000016226	-	100	92.190	ENSANAG00000024637	FARSB	100	92.190	Aotus_nancymaae
ENSSSCG00000016226	-	100	75.763	ENSACLG00000013951	farsb	100	73.628	Astatotilapia_calliptera
ENSSSCG00000016226	-	85	73.800	ENSAMXG00000033881	farsb	100	73.800	Astyanax_mexicanus
ENSSSCG00000016226	-	96	94.858	ENSBTAG00000045523	-	100	94.858	Bos_taurus
ENSSSCG00000016226	-	100	95.246	ENSBTAG00000011649	FARSB	100	95.246	Bos_taurus
ENSSSCG00000016226	-	100	59.122	WBGene00001498	fars-3	100	59.122	Caenorhabditis_elegans
ENSSSCG00000016226	-	100	92.699	ENSCJAG00000012181	FARSB	100	92.699	Callithrix_jacchus
ENSSSCG00000016226	-	100	94.228	ENSCAFG00000016094	-	100	94.228	Canis_familiaris
ENSSSCG00000016226	-	100	91.525	ENSCAFG00020026684	FARSB	100	94.671	Canis_lupus_dingo
ENSSSCG00000016226	-	100	95.246	ENSCHIG00000014275	FARSB	100	95.246	Capra_hircus
ENSSSCG00000016226	-	100	91.511	ENSTSYG00000008461	FARSB	100	91.511	Carlito_syrichta
ENSSSCG00000016226	-	96	84.495	ENSCAPG00000016436	FARSB	99	84.495	Cavia_aperea
ENSSSCG00000016226	-	100	91.341	ENSCPOG00000013109	FARSB	100	91.341	Cavia_porcellus
ENSSSCG00000016226	-	100	88.285	ENSCCAG00000025840	FARSB	100	88.285	Cebus_capucinus
ENSSSCG00000016226	-	100	93.039	ENSCATG00000036168	FARSB	100	93.039	Cercocebus_atys
ENSSSCG00000016226	-	100	91.002	ENSCLAG00000011954	FARSB	100	91.002	Chinchilla_lanigera
ENSSSCG00000016226	-	100	93.039	ENSCSAG00000007806	FARSB	100	93.039	Chlorocebus_sabaeus
ENSSSCG00000016226	-	81	94.382	ENSCHOG00000011785	FARSB	81	94.382	Choloepus_hoffmanni
ENSSSCG00000016226	-	100	82.881	ENSCPBG00000019346	FARSB	98	82.881	Chrysemys_picta_bellii
ENSSSCG00000016226	-	99	58.194	ENSCING00000004180	-	99	58.194	Ciona_intestinalis
ENSSSCG00000016226	-	99	60.870	ENSCSAVG00000005346	-	99	60.870	Ciona_savignyi
ENSSSCG00000016226	-	97	92.619	ENSCANG00000036239	FARSB	100	92.619	Colobus_angolensis_palliatus
ENSSSCG00000016226	-	100	91.851	ENSCGRG00001022928	Farsb	100	91.851	Cricetulus_griseus_chok1gshd
ENSSSCG00000016226	-	100	91.851	ENSCGRG00000001513	Farsb	100	91.851	Cricetulus_griseus_crigri
ENSSSCG00000016226	-	100	75.593	ENSCSEG00000005415	farsb	100	72.648	Cynoglossus_semilaevis
ENSSSCG00000016226	-	84	74.000	ENSCVAG00000018815	farsb	98	74.000	Cyprinodon_variegatus
ENSSSCG00000016226	-	100	75.465	ENSDARG00000016864	farsb	100	75.465	Danio_rerio
ENSSSCG00000016226	-	100	92.190	ENSDNOG00000002511	FARSB	100	92.190	Dasypus_novemcinctus
ENSSSCG00000016226	-	100	91.341	ENSDORG00000011102	Farsb	100	91.341	Dipodomys_ordii
ENSSSCG00000016226	-	100	62.331	FBgn0039175	beta-PheRS	100	62.331	Drosophila_melanogaster
ENSSSCG00000016226	-	97	86.643	ENSETEG00000015080	FARSB	100	86.643	Echinops_telfairi
ENSSSCG00000016226	-	100	66.102	ENSEBUG00000006846	farsb	100	66.102	Eptatretus_burgeri
ENSSSCG00000016226	-	100	93.888	ENSEASG00005011297	FARSB	100	93.888	Equus_asinus_asinus
ENSSSCG00000016226	-	100	90.656	ENSECAG00000023086	FARSB	99	93.566	Equus_caballus
ENSSSCG00000016226	-	100	72.156	ENSEEUG00000007441	FARSB	100	72.156	Erinaceus_europaeus
ENSSSCG00000016226	-	97	75.175	ENSELUG00000014767	farsb	99	75.175	Esox_lucius
ENSSSCG00000016226	-	100	93.718	ENSFCAG00000026772	FARSB	100	93.718	Felis_catus
ENSSSCG00000016226	-	97	81.053	ENSFALG00000006739	FARSB	96	81.053	Ficedula_albicollis
ENSSSCG00000016226	-	100	91.511	ENSFDAG00000008871	FARSB	100	91.511	Fukomys_damarensis
ENSSSCG00000016226	-	100	74.746	ENSFHEG00000020939	farsb	98	75.185	Fundulus_heteroclitus
ENSSSCG00000016226	-	94	71.542	ENSGMOG00000013047	farsb	100	72.274	Gadus_morhua
ENSSSCG00000016226	-	100	80.847	ENSGALG00000005236	FARSB	100	80.847	Gallus_gallus
ENSSSCG00000016226	-	100	74.576	ENSGAFG00000020900	farsb	100	72.119	Gambusia_affinis
ENSSSCG00000016226	-	91	75.615	ENSGACG00000000261	farsb	100	74.492	Gasterosteus_aculeatus
ENSSSCG00000016226	-	100	83.390	ENSGAGG00000016575	FARSB	98	83.390	Gopherus_agassizii
ENSSSCG00000016226	-	100	75.593	ENSHBUG00000022379	farsb	100	73.898	Haplochromis_burtoni
ENSSSCG00000016226	-	100	91.681	ENSHGLG00000015965	FARSB	100	91.681	Heterocephalus_glaber_female
ENSSSCG00000016226	-	100	91.681	ENSHGLG00100001035	FARSB	100	91.681	Heterocephalus_glaber_male
ENSSSCG00000016226	-	91	70.336	ENSHCOG00000016462	farsb	100	70.336	Hippocampus_comes
ENSSSCG00000016226	-	100	77.288	ENSIPUG00000002754	farsb	100	77.288	Ictalurus_punctatus
ENSSSCG00000016226	-	100	93.548	ENSSTOG00000016169	FARSB	100	93.548	Ictidomys_tridecemlineatus
ENSSSCG00000016226	-	100	92.530	ENSJJAG00000003267	Farsb	100	92.530	Jaculus_jaculus
ENSSSCG00000016226	-	100	67.508	ENSKMAG00000005363	farsb	100	67.508	Kryptolebias_marmoratus
ENSSSCG00000016226	-	100	75.593	ENSLBEG00000018127	farsb	70	75.593	Labrus_bergylta
ENSSSCG00000016226	-	100	79.831	ENSLACG00000002551	FARSB	100	79.831	Latimeria_chalumnae
ENSSSCG00000016226	-	100	77.929	ENSLOCG00000004136	farsb	100	77.929	Lepisosteus_oculatus
ENSSSCG00000016226	-	100	93.209	ENSLAFG00000015659	FARSB	100	93.209	Loxodonta_africana
ENSSSCG00000016226	-	100	92.869	ENSMFAG00000036645	FARSB	100	92.869	Macaca_fascicularis
ENSSSCG00000016226	-	100	89.813	ENSMMUG00000007685	FARSB	100	89.813	Macaca_mulatta
ENSSSCG00000016226	-	100	92.699	ENSMNEG00000030672	FARSB	100	92.699	Macaca_nemestrina
ENSSSCG00000016226	-	100	93.039	ENSMLEG00000042060	FARSB	100	93.039	Mandrillus_leucophaeus
ENSSSCG00000016226	-	100	76.441	ENSMAMG00000011835	farsb	100	70.508	Mastacembelus_armatus
ENSSSCG00000016226	-	96	73.582	ENSMZEG00005004544	farsb	100	73.582	Maylandia_zebra
ENSSSCG00000016226	-	95	80.893	ENSMGAG00000004670	FARSB	100	80.893	Meleagris_gallopavo
ENSSSCG00000016226	-	79	87.500	ENSMAUG00000017805	Farsb	100	87.500	Mesocricetus_auratus
ENSSSCG00000016226	-	100	93.718	ENSMICG00000002495	FARSB	100	93.718	Microcebus_murinus
ENSSSCG00000016226	-	100	90.153	ENSMOCG00000003181	Farsb	100	90.153	Microtus_ochrogaster
ENSSSCG00000016226	-	100	70.101	ENSMMOG00000006265	farsb	100	70.101	Mola_mola
ENSSSCG00000016226	-	100	86.949	ENSMODG00000021192	FARSB	100	86.949	Monodelphis_domestica
ENSSSCG00000016226	-	94	74.910	ENSMALG00000021188	farsb	92	74.910	Monopterus_albus
ENSSSCG00000016226	-	100	90.662	MGP_CAROLIEiJ_G0014310	Farsb	100	90.717	Mus_caroli
ENSSSCG00000016226	-	100	90.832	ENSMUSG00000026245	Farsb	100	90.832	Mus_musculus
ENSSSCG00000016226	-	100	91.511	MGP_PahariEiJ_G0027548	Farsb	100	91.511	Mus_pahari
ENSSSCG00000016226	-	100	90.662	MGP_SPRETEiJ_G0015116	Farsb	100	90.717	Mus_spretus
ENSSSCG00000016226	-	100	93.718	ENSMPUG00000016677	FARSB	100	93.718	Mustela_putorius_furo
ENSSSCG00000016226	-	100	93.888	ENSMLUG00000010904	FARSB	100	93.888	Myotis_lucifugus
ENSSSCG00000016226	-	100	91.002	ENSNGAG00000014602	Farsb	100	91.002	Nannospalax_galili
ENSSSCG00000016226	-	100	75.763	ENSNBRG00000003198	farsb	100	71.477	Neolamprologus_brichardi
ENSSSCG00000016226	-	100	93.209	ENSNLEG00000009638	FARSB	100	93.209	Nomascus_leucogenys
ENSSSCG00000016226	-	100	76.441	ENSMEUG00000010798	FARSB	100	76.441	Notamacropus_eugenii
ENSSSCG00000016226	-	89	76.259	ENSOPRG00000003292	FARSB	89	76.259	Ochotona_princeps
ENSSSCG00000016226	-	100	89.813	ENSODEG00000005451	FARSB	100	89.813	Octodon_degus
ENSSSCG00000016226	-	100	75.593	ENSONIG00000014639	farsb	100	75.593	Oreochromis_niloticus
ENSSSCG00000016226	-	90	83.471	ENSOANG00000015387	FARSB	100	82.090	Ornithorhynchus_anatinus
ENSSSCG00000016226	-	92	92.037	ENSOCUG00000007828	FARSB	95	92.037	Oryctolagus_cuniculus
ENSSSCG00000016226	-	100	75.085	ENSORLG00000009135	farsb	100	72.881	Oryzias_latipes
ENSSSCG00000016226	-	100	74.915	ENSORLG00015001072	farsb	100	67.059	Oryzias_latipes_hsok
ENSSSCG00000016226	-	100	75.254	ENSOMEG00000019009	farsb	100	71.695	Oryzias_melastigma
ENSSSCG00000016226	-	100	85.762	ENSOGAG00000010125	FARSB	100	85.762	Otolemur_garnettii
ENSSSCG00000016226	-	100	95.416	ENSOARG00000020329	FARSB	100	95.416	Ovis_aries
ENSSSCG00000016226	-	100	93.379	ENSPPAG00000039268	FARSB	100	93.379	Pan_paniscus
ENSSSCG00000016226	-	100	93.379	ENSPPRG00000010687	FARSB	100	93.379	Panthera_pardus
ENSSSCG00000016226	-	100	93.379	ENSPTIG00000004299	FARSB	100	93.379	Panthera_tigris_altaica
ENSSSCG00000016226	-	100	93.379	ENSPTRG00000012974	FARSB	100	93.379	Pan_troglodytes
ENSSSCG00000016226	-	100	93.039	ENSPANG00000016304	FARSB	100	93.039	Papio_anubis
ENSSSCG00000016226	-	100	74.915	ENSPKIG00000006661	farsb	100	74.915	Paramormyrops_kingsleyae
ENSSSCG00000016226	-	99	82.143	ENSPSIG00000006248	FARSB	99	82.143	Pelodiscus_sinensis
ENSSSCG00000016226	-	83	73.975	ENSPMGG00000002815	farsb	99	73.975	Periophthalmus_magnuspinnatus
ENSSSCG00000016226	-	100	90.323	ENSPEMG00000003131	Farsb	100	90.323	Peromyscus_maniculatus_bairdii
ENSSSCG00000016226	-	100	86.617	ENSPCIG00000019458	FARSB	100	86.617	Phascolarctos_cinereus
ENSSSCG00000016226	-	100	75.593	ENSPLAG00000001104	farsb	100	76.459	Poecilia_latipinna
ENSSSCG00000016226	-	100	75.763	ENSPMEG00000017658	farsb	100	76.654	Poecilia_mexicana
ENSSSCG00000016226	-	100	76.394	ENSPREG00000010583	farsb	100	76.394	Poecilia_reticulata
ENSSSCG00000016226	-	100	93.209	ENSPPYG00000013221	FARSB	100	93.209	Pongo_abelii
ENSSSCG00000016226	-	85	84.970	ENSPCAG00000002757	FARSB	85	84.970	Procavia_capensis
ENSSSCG00000016226	-	63	94.295	ENSPCOG00000028852	FARSB	100	94.295	Propithecus_coquereli
ENSSSCG00000016226	-	100	93.888	ENSPVAG00000006985	FARSB	100	93.888	Pteropus_vampyrus
ENSSSCG00000016226	-	100	64.746	ENSPNYG00000011433	farsb	100	64.746	Pundamilia_nyererei
ENSSSCG00000016226	-	100	76.441	ENSPNAG00000021802	farsb	100	76.441	Pygocentrus_nattereri
ENSSSCG00000016226	-	100	90.492	ENSRNOG00000014119	Farsb	100	90.492	Rattus_norvegicus
ENSSSCG00000016226	-	92	93.148	ENSRBIG00000033191	FARSB	98	92.463	Rhinopithecus_bieti
ENSSSCG00000016226	-	100	93.039	ENSRROG00000029388	FARSB	100	93.039	Rhinopithecus_roxellana
ENSSSCG00000016226	-	100	45.320	YLR060W	FRS1	100	45.320	Saccharomyces_cerevisiae
ENSSSCG00000016226	-	100	84.380	ENSSBOG00000019084	FARSB	100	84.380	Saimiri_boliviensis_boliviensis
ENSSSCG00000016226	-	92	80.146	ENSSHAG00000015752	FARSB	100	80.146	Sarcophilus_harrisii
ENSSSCG00000016226	-	100	74.024	ENSSFOG00015007850	farsb	100	74.024	Scleropages_formosus
ENSSSCG00000016226	-	100	75.763	ENSSMAG00000020668	farsb	100	74.407	Scophthalmus_maximus
ENSSSCG00000016226	-	100	76.858	ENSSDUG00000009685	farsb	100	73.064	Seriola_dumerili
ENSSSCG00000016226	-	100	76.520	ENSSLDG00000025206	farsb	100	73.142	Seriola_lalandi_dorsalis
ENSSSCG00000016226	-	61	91.837	ENSSARG00000005655	-	66	91.837	Sorex_araneus
ENSSSCG00000016226	-	95	77.524	ENSSPUG00000002245	FARSB	100	77.524	Sphenodon_punctatus
ENSSSCG00000016226	-	100	75.763	ENSSPAG00000007367	farsb	69	75.763	Stegastes_partitus
ENSSSCG00000016226	-	97	81.404	ENSTGUG00000007788	FARSB	99	81.404	Taeniopygia_guttata
ENSSSCG00000016226	-	100	74.915	ENSTRUG00000009483	farsb	70	74.915	Takifugu_rubripes
ENSSSCG00000016226	-	100	74.576	ENSTNIG00000014310	farsb	100	74.576	Tetraodon_nigroviridis
ENSSSCG00000016226	-	91	88.372	ENSTBEG00000003136	FARSB	84	88.372	Tupaia_belangeri
ENSSSCG00000016226	-	88	95.980	ENSTTRG00000009082	FARSB	88	95.980	Tursiops_truncatus
ENSSSCG00000016226	-	85	90.200	ENSUAMG00000024613	FARSB	99	90.200	Ursus_americanus
ENSSSCG00000016226	-	100	93.548	ENSUMAG00000017995	FARSB	100	93.548	Ursus_maritimus
ENSSSCG00000016226	-	92	90.943	ENSVPAG00000006844	FARSB	100	90.943	Vicugna_pacos
ENSSSCG00000016226	-	100	93.888	ENSVVUG00000024025	FARSB	100	93.888	Vulpes_vulpes
ENSSSCG00000016226	-	100	78.511	ENSXETG00000002934	farsb	100	78.511	Xenopus_tropicalis
ENSSSCG00000016226	-	100	74.915	ENSXMAG00000008280	farsb	100	73.371	Xiphophorus_maculatus