EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000016275 (Gene tree)
Gene ID: 100737210
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 10757 bases
Position: chr15:132163463-132174219
Accession: 100737210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017242	RRM_1	PF00076.22	1.4e-58	1	4
ENSSSCP00000017242	RRM_1	PF00076.22	1.4e-58	2	4
ENSSSCP00000017242	RRM_1	PF00076.22	1.4e-58	3	4
ENSSSCP00000017242	RRM_1	PF00076.22	1.4e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000017723	NCL-201	2765	XM_021074959	ENSSSCP00000017242	724 (aa)	XP_020930618	F1SMV6

Gene Model

Click here to download ENSSSCG00000016275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016275	NCL	92	85.135	ENSG00000115053	NCL	100	89.865	Homo_sapiens
ENSSSCG00000016275	NCL	52	97.889	ENSAMEG00000016289	NCL	92	89.023	Ailuropoda_melanoleuca
ENSSSCG00000016275	NCL	92	85.843	ENSANAG00000035814	-	92	85.994	Aotus_nancymaae
ENSSSCG00000016275	NCL	100	68.785	ENSANAG00000024378	-	85	78.528	Aotus_nancymaae
ENSSSCG00000016275	NCL	94	85.610	ENSBTAG00000016174	NCL	92	88.156	Bos_taurus
ENSSSCG00000016275	NCL	80	92.667	ENSBTAG00000026909	-	96	92.667	Bos_taurus
ENSSSCG00000016275	NCL	90	90.476	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSSSCG00000016275	NCL	73	90.574	ENSBTAG00000050728	-	85	90.574	Bos_taurus
ENSSSCG00000016275	NCL	52	96.042	ENSCJAG00000013538	NCL	53	96.042	Callithrix_jacchus
ENSSSCG00000016275	NCL	92	89.608	ENSCAFG00000011037	NCL	92	89.307	Canis_familiaris
ENSSSCG00000016275	NCL	84	89.362	ENSCAFG00020023145	NCL	89	89.034	Canis_lupus_dingo
ENSSSCG00000016275	NCL	85	87.013	ENSCHIG00000010894	-	91	87.825	Capra_hircus
ENSSSCG00000016275	NCL	92	74.208	ENSCHIG00000012143	-	92	73.163	Capra_hircus
ENSSSCG00000016275	NCL	92	96.460	ENSCHIG00000021052	-	83	96.460	Capra_hircus
ENSSSCG00000016275	NCL	92	81.448	ENSCHIG00000026149	-	53	90.237	Capra_hircus
ENSSSCG00000016275	NCL	90	74.501	ENSTSYG00000036886	-	75	84.392	Carlito_syrichta
ENSSSCG00000016275	NCL	95	83.871	ENSTSYG00000029779	-	98	81.987	Carlito_syrichta
ENSSSCG00000016275	NCL	92	86.228	ENSTSYG00000004355	-	92	86.078	Carlito_syrichta
ENSSSCG00000016275	NCL	91	77.341	ENSCAPG00000009405	NCL	91	77.795	Cavia_aperea
ENSSSCG00000016275	NCL	92	80.240	ENSCPOG00000001034	NCL	92	80.988	Cavia_porcellus
ENSSSCG00000016275	NCL	55	87.437	ENSCCAG00000000551	-	76	87.562	Cebus_capucinus
ENSSSCG00000016275	NCL	52	96.042	ENSCCAG00000021040	-	54	96.042	Cebus_capucinus
ENSSSCG00000016275	NCL	92	87.988	ENSCATG00000037033	NCL	92	86.937	Cercocebus_atys
ENSSSCG00000016275	NCL	92	81.315	ENSCLAG00000013080	NCL	92	81.437	Chinchilla_lanigera
ENSSSCG00000016275	NCL	61	96.599	ENSCSAG00000006660	NCL	95	96.599	Chlorocebus_sabaeus
ENSSSCG00000016275	NCL	62	75.839	ENSCHOG00000012860	NCL	78	80.952	Choloepus_hoffmanni
ENSSSCG00000016275	NCL	92	79.880	ENSCGRG00001024315	-	91	79.880	Cricetulus_griseus_chok1gshd
ENSSSCG00000016275	NCL	85	79.388	ENSCGRG00000017894	-	88	79.388	Cricetulus_griseus_crigri
ENSSSCG00000016275	NCL	92	86.186	ENSDNOG00000010783	-	92	85.435	Dasypus_novemcinctus
ENSSSCG00000016275	NCL	100	75.482	ENSDNOG00000046347	-	99	74.518	Dasypus_novemcinctus
ENSSSCG00000016275	NCL	51	73.497	ENSDORG00000023596	-	92	68.030	Dipodomys_ordii
ENSSSCG00000016275	NCL	53	84.073	ENSDORG00000012513	-	91	76.621	Dipodomys_ordii
ENSSSCG00000016275	NCL	70	66.396	ENSETEG00000008139	-	86	66.216	Echinops_telfairi
ENSSSCG00000016275	NCL	52	89.920	ENSETEG00000014756	-	100	86.364	Echinops_telfairi
ENSSSCG00000016275	NCL	71	57.143	ENSETEG00000008553	-	80	63.947	Echinops_telfairi
ENSSSCG00000016275	NCL	52	90.263	ENSETEG00000018937	-	62	87.045	Echinops_telfairi
ENSSSCG00000016275	NCL	89	88.940	ENSEASG00005008488	NCL	91	87.865	Equus_asinus_asinus
ENSSSCG00000016275	NCL	92	89.505	ENSECAG00000021868	NCL	92	88.456	Equus_caballus
ENSSSCG00000016275	NCL	92	90.361	ENSFCAG00000027622	NCL	92	90.211	Felis_catus
ENSSSCG00000016275	NCL	91	84.314	ENSFDAG00000014291	NCL	92	82.051	Fukomys_damarensis
ENSSSCG00000016275	NCL	92	86.937	ENSGGOG00000004300	NCL	79	91.176	Gorilla_gorilla
ENSSSCG00000016275	NCL	52	86.170	ENSHGLG00000011069	-	55	86.243	Heterocephalus_glaber_female
ENSSSCG00000016275	NCL	52	94.459	ENSHGLG00000002031	-	92	82.511	Heterocephalus_glaber_female
ENSSSCG00000016275	NCL	54	82.097	ENSJJAG00000016165	Ncl	93	77.280	Jaculus_jaculus
ENSSSCG00000016275	NCL	91	73.002	ENSLAFG00000013061	NCL	86	83.099	Loxodonta_africana
ENSSSCG00000016275	NCL	92	88.138	ENSMFAG00000040385	NCL	92	87.087	Macaca_fascicularis
ENSSSCG00000016275	NCL	92	88.138	ENSMMUG00000018094	NCL	92	87.087	Macaca_mulatta
ENSSSCG00000016275	NCL	62	91.353	ENSMNEG00000023839	NCL	73	97.727	Macaca_nemestrina
ENSSSCG00000016275	NCL	92	88.138	ENSMLEG00000028935	NCL	92	87.087	Mandrillus_leucophaeus
ENSSSCG00000016275	NCL	92	84.985	ENSMICG00000002538	-	92	84.835	Microcebus_murinus
ENSSSCG00000016275	NCL	92	69.231	ENSMICG00000029975	-	86	78.723	Microcebus_murinus
ENSSSCG00000016275	NCL	92	78.078	MGP_CAROLIEiJ_G0014362	Ncl	92	77.628	Mus_caroli
ENSSSCG00000016275	NCL	92	76.276	ENSMUSG00000026234	Ncl	92	76.727	Mus_musculus
ENSSSCG00000016275	NCL	92	76.647	MGP_PahariEiJ_G0027599	Ncl	92	76.946	Mus_pahari
ENSSSCG00000016275	NCL	92	77.361	MGP_SPRETEiJ_G0015164	Ncl	92	77.361	Mus_spretus
ENSSSCG00000016275	NCL	92	86.866	ENSMLUG00000014547	NCL	92	85.224	Myotis_lucifugus
ENSSSCG00000016275	NCL	92	80.444	ENSNGAG00000002454	-	53	89.182	Nannospalax_galili
ENSSSCG00000016275	NCL	52	72.800	ENSNGAG00000006188	-	54	72.032	Nannospalax_galili
ENSSSCG00000016275	NCL	85	75.090	ENSNLEG00000014107	-	50	82.390	Nomascus_leucogenys
ENSSSCG00000016275	NCL	53	90.390	ENSODEG00000003281	-	92	79.941	Octodon_degus
ENSSSCG00000016275	NCL	100	75.421	ENSODEG00000002441	-	84	85.169	Octodon_degus
ENSSSCG00000016275	NCL	60	73.743	ENSODEG00000007803	-	90	62.937	Octodon_degus
ENSSSCG00000016275	NCL	82	94.737	ENSOCUG00000004312	NCL	80	94.723	Oryctolagus_cuniculus
ENSSSCG00000016275	NCL	72	87.071	ENSOGAG00000027852	NCL	83	87.071	Otolemur_garnettii
ENSSSCG00000016275	NCL	85	77.994	ENSOARG00000013710	-	64	95.251	Ovis_aries
ENSSSCG00000016275	NCL	53	80.052	ENSOARG00000004072	-	61	80.475	Ovis_aries
ENSSSCG00000016275	NCL	91	82.282	ENSOARG00000020709	-	92	82.132	Ovis_aries
ENSSSCG00000016275	NCL	92	85.135	ENSPPAG00000011619	NCL	86	91.176	Pan_paniscus
ENSSSCG00000016275	NCL	92	89.910	ENSPPRG00000012603	NCL	92	89.910	Panthera_pardus
ENSSSCG00000016275	NCL	91	89.666	ENSPTIG00000010393	NCL	91	89.666	Panthera_tigris_altaica
ENSSSCG00000016275	NCL	92	87.688	ENSPTRG00000013025	NCL	79	91.176	Pan_troglodytes
ENSSSCG00000016275	NCL	92	88.138	ENSPANG00000010292	NCL	92	87.087	Papio_anubis
ENSSSCG00000016275	NCL	92	79.341	ENSPPYG00000013265	NCL	53	86.684	Pongo_abelii
ENSSSCG00000016275	NCL	91	80.606	ENSPCOG00000004160	-	85	89.418	Propithecus_coquereli
ENSSSCG00000016275	NCL	92	86.547	ENSPCOG00000003051	-	91	85.351	Propithecus_coquereli
ENSSSCG00000016275	NCL	92	88.623	ENSPVAG00000000297	NCL	92	88.024	Pteropus_vampyrus
ENSSSCG00000016275	NCL	92	77.395	ENSRNOG00000018273	Ncl	92	78.593	Rattus_norvegicus
ENSSSCG00000016275	NCL	92	83.861	ENSRBIG00000037525	-	63	92.273	Rhinopithecus_bieti
ENSSSCG00000016275	NCL	65	96.540	ENSRBIG00000035396	-	79	94.631	Rhinopithecus_bieti
ENSSSCG00000016275	NCL	99	86.496	ENSRROG00000036103	-	99	85.000	Rhinopithecus_roxellana
ENSSSCG00000016275	NCL	92	87.688	ENSRROG00000028756	-	91	86.637	Rhinopithecus_roxellana
ENSSSCG00000016275	NCL	72	87.071	ENSSBOG00000027549	-	83	87.071	Saimiri_boliviensis_boliviensis
ENSSSCG00000016275	NCL	52	95.778	ENSSBOG00000029193	-	92	86.807	Saimiri_boliviensis_boliviensis
ENSSSCG00000016275	NCL	54	73.973	ENSSBOG00000023094	-	86	74.208	Saimiri_boliviensis_boliviensis
ENSSSCG00000016275	NCL	61	82.955	ENSTBEG00000001546	-	94	78.940	Tupaia_belangeri
ENSSSCG00000016275	NCL	64	80.737	ENSTBEG00000002469	-	66	80.571	Tupaia_belangeri
ENSSSCG00000016275	NCL	92	87.651	ENSTTRG00000009094	NCL	91	88.855	Tursiops_truncatus
ENSSSCG00000016275	NCL	52	97.889	ENSUAMG00000005639	NCL	75	97.889	Ursus_americanus
ENSSSCG00000016275	NCL	52	97.889	ENSUMAG00000015789	NCL	92	89.157	Ursus_maritimus
ENSSSCG00000016275	NCL	68	90.141	ENSVPAG00000001796	NCL	66	90.984	Vicugna_pacos
ENSSSCG00000016275	NCL	92	86.295	ENSVVUG00000025564	NCL	91	86.145	Vulpes_vulpes