EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000016565 (Gene tree)
Gene ID: 100516654
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 30403 bases
Position: chr18:18731226-18761628
Accession: 100516654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027411	zf-C3HC	PF07967.13	1.8e-36	1	1
ENSSSCP00000017549	zf-C3HC	PF07967.13	5.6e-36	1	1
ENSSSCP00000058226	zf-C3HC	PF07967.13	1.5e-16	1	1
ENSSSCP00000058226	Rsm1	PF08600.10	1.4e-15	1	1
ENSSSCP00000017549	Rsm1	PF08600.10	1.3e-14	1	1
ENSSSCP00000027411	Rsm1	PF08600.10	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000018035	ZC3HC1-202	2051	XM_021078727	ENSSSCP00000017549	501 (aa)	XP_020934386	F1SMR6
ENSSSCT00000064713	ZC3HC1-201	3047	-	ENSSSCP00000058226	388 (aa)	-	A0A287BNN2
ENSSSCT00000028385	ZC3HC1-203	1711	-	ENSSSCP00000027411	430 (aa)	-	I3LTG5

Gene Model

Click here to download ENSSSCG00000016565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016565	ZC3HC1	99	91.495	ENSG00000091732	ZC3HC1	99	90.619	Homo_sapiens
ENSSSCG00000016565	ZC3HC1	99	43.532	ENSAPOG00000009078	zc3hc1	95	43.611	Acanthochromis_polyacanthus
ENSSSCG00000016565	ZC3HC1	100	90.079	ENSAMEG00000005425	ZC3HC1	100	90.079	Ailuropoda_melanoleuca
ENSSSCG00000016565	ZC3HC1	99	42.893	ENSACIG00000019513	zc3hc1	95	42.424	Amphilophus_citrinellus
ENSSSCG00000016565	ZC3HC1	99	44.279	ENSAOCG00000024310	zc3hc1	95	44.828	Amphiprion_ocellaris
ENSSSCG00000016565	ZC3HC1	99	44.279	ENSAPEG00000004907	zc3hc1	95	44.828	Amphiprion_percula
ENSSSCG00000016565	ZC3HC1	93	43.883	ENSATEG00000016898	zc3hc1	85	45.991	Anabas_testudineus
ENSSSCG00000016565	ZC3HC1	99	59.794	ENSAPLG00000003832	ZC3HC1	99	61.851	Anas_platyrhynchos
ENSSSCG00000016565	ZC3HC1	100	59.172	ENSACAG00000001638	ZC3HC1	100	59.172	Anolis_carolinensis
ENSSSCG00000016565	ZC3HC1	100	90.746	ENSANAG00000022213	ZC3HC1	100	89.095	Aotus_nancymaae
ENSSSCG00000016565	ZC3HC1	99	42.432	ENSACLG00000025033	zc3hc1	94	44.643	Astatotilapia_calliptera
ENSSSCG00000016565	ZC3HC1	98	42.347	ENSAMXG00000036792	zc3hc1	97	42.857	Astyanax_mexicanus
ENSSSCG00000016565	ZC3HC1	100	92.032	ENSBTAG00000011247	ZC3HC1	100	92.032	Bos_taurus
ENSSSCG00000016565	ZC3HC1	100	89.974	ENSCJAG00000010536	ZC3HC1	100	88.845	Callithrix_jacchus
ENSSSCG00000016565	ZC3HC1	100	90.040	ENSCAFG00000028735	-	100	90.040	Canis_familiaris
ENSSSCG00000016565	ZC3HC1	100	90.488	ENSCAFG00000001499	-	99	90.297	Canis_familiaris
ENSSSCG00000016565	ZC3HC1	100	90.438	ENSCAFG00000031850	-	100	90.438	Canis_familiaris
ENSSSCG00000016565	ZC3HC1	100	90.040	ENSCAFG00000029401	-	99	90.040	Canis_familiaris
ENSSSCG00000016565	ZC3HC1	100	90.488	ENSCAFG00020023333	-	100	89.286	Canis_lupus_dingo
ENSSSCG00000016565	ZC3HC1	100	90.239	ENSCAFG00020006829	-	100	90.239	Canis_lupus_dingo
ENSSSCG00000016565	ZC3HC1	100	85.090	ENSCHIG00000014103	ZC3HC1	100	85.060	Capra_hircus
ENSSSCG00000016565	ZC3HC1	100	88.247	ENSTSYG00000002843	ZC3HC1	100	88.247	Carlito_syrichta
ENSSSCG00000016565	ZC3HC1	100	59.383	ENSCAPG00000016300	ZC3HC1	93	76.301	Cavia_aperea
ENSSSCG00000016565	ZC3HC1	100	84.455	ENSCPOG00000014034	ZC3HC1	100	84.455	Cavia_porcellus
ENSSSCG00000016565	ZC3HC1	94	78.630	ENSCCAG00000020384	ZC3HC1	100	88.546	Cebus_capucinus
ENSSSCG00000016565	ZC3HC1	100	91.003	ENSCATG00000023130	ZC3HC1	100	90.637	Cercocebus_atys
ENSSSCG00000016565	ZC3HC1	100	65.206	ENSCLAG00000008260	ZC3HC1	100	61.677	Chinchilla_lanigera
ENSSSCG00000016565	ZC3HC1	94	91.257	ENSCSAG00000009881	ZC3HC1	97	91.257	Chlorocebus_sabaeus
ENSSSCG00000016565	ZC3HC1	99	89.406	ENSCHOG00000011846	ZC3HC1	99	89.579	Choloepus_hoffmanni
ENSSSCG00000016565	ZC3HC1	100	67.519	ENSCPBG00000017519	ZC3HC1	100	66.270	Chrysemys_picta_bellii
ENSSSCG00000016565	ZC3HC1	100	90.746	ENSCANG00000029091	ZC3HC1	100	90.438	Colobus_angolensis_palliatus
ENSSSCG00000016565	ZC3HC1	100	86.118	ENSCGRG00001018805	Zc3hc1	100	86.056	Cricetulus_griseus_chok1gshd
ENSSSCG00000016565	ZC3HC1	100	86.118	ENSCGRG00000017114	Zc3hc1	100	84.861	Cricetulus_griseus_crigri
ENSSSCG00000016565	ZC3HC1	99	42.857	ENSCSEG00000009284	zc3hc1	95	42.829	Cynoglossus_semilaevis
ENSSSCG00000016565	ZC3HC1	99	42.040	ENSCVAG00000011566	zc3hc1	94	42.008	Cyprinodon_variegatus
ENSSSCG00000016565	ZC3HC1	99	46.734	ENSDARG00000062651	zc3hc1	97	45.582	Danio_rerio
ENSSSCG00000016565	ZC3HC1	100	87.404	ENSDNOG00000045016	ZC3HC1	100	86.853	Dasypus_novemcinctus
ENSSSCG00000016565	ZC3HC1	100	83.290	ENSDORG00000008697	Zc3hc1	100	77.888	Dipodomys_ordii
ENSSSCG00000016565	ZC3HC1	100	90.231	ENSEASG00005008789	ZC3HC1	97	90.487	Equus_asinus_asinus
ENSSSCG00000016565	ZC3HC1	100	89.974	ENSECAG00000017886	ZC3HC1	100	89.662	Equus_caballus
ENSSSCG00000016565	ZC3HC1	84	82.099	ENSEEUG00000003123	ZC3HC1	84	82.099	Erinaceus_europaeus
ENSSSCG00000016565	ZC3HC1	99	44.089	ENSELUG00000023168	zc3hc1	94	45.030	Esox_lucius
ENSSSCG00000016565	ZC3HC1	100	89.442	ENSFCAG00000010429	ZC3HC1	100	89.442	Felis_catus
ENSSSCG00000016565	ZC3HC1	100	60.401	ENSFALG00000005006	ZC3HC1	100	60.730	Ficedula_albicollis
ENSSSCG00000016565	ZC3HC1	100	84.861	ENSFDAG00000019897	ZC3HC1	100	84.861	Fukomys_damarensis
ENSSSCG00000016565	ZC3HC1	100	42.118	ENSFHEG00000020149	zc3hc1	96	41.498	Fundulus_heteroclitus
ENSSSCG00000016565	ZC3HC1	99	42.250	ENSGMOG00000002914	zc3hc1	95	41.598	Gadus_morhua
ENSSSCG00000016565	ZC3HC1	99	61.697	ENSGALG00000008003	ZC3HC1	99	60.757	Gallus_gallus
ENSSSCG00000016565	ZC3HC1	100	42.574	ENSGAFG00000016095	zc3hc1	96	42.626	Gambusia_affinis
ENSSSCG00000016565	ZC3HC1	99	44.500	ENSGACG00000019706	zc3hc1	94	44.650	Gasterosteus_aculeatus
ENSSSCG00000016565	ZC3HC1	100	68.798	ENSGAGG00000016106	ZC3HC1	100	68.798	Gopherus_agassizii
ENSSSCG00000016565	ZC3HC1	99	91.237	ENSGGOG00000015504	ZC3HC1	99	90.419	Gorilla_gorilla
ENSSSCG00000016565	ZC3HC1	99	42.928	ENSHBUG00000008347	zc3hc1	96	43.200	Haplochromis_burtoni
ENSSSCG00000016565	ZC3HC1	100	86.255	ENSHGLG00000005085	ZC3HC1	100	86.255	Heterocephalus_glaber_female
ENSSSCG00000016565	ZC3HC1	100	86.056	ENSHGLG00100011395	ZC3HC1	100	86.056	Heterocephalus_glaber_male
ENSSSCG00000016565	ZC3HC1	99	41.985	ENSHCOG00000014309	zc3hc1	95	42.181	Hippocampus_comes
ENSSSCG00000016565	ZC3HC1	100	88.689	ENSSTOG00000023599	-	100	87.849	Ictidomys_tridecemlineatus
ENSSSCG00000016565	ZC3HC1	99	43.921	ENSKMAG00000015315	zc3hc1	88	43.878	Kryptolebias_marmoratus
ENSSSCG00000016565	ZC3HC1	99	43.842	ENSLBEG00000017325	zc3hc1	95	43.173	Labrus_bergylta
ENSSSCG00000016565	ZC3HC1	79	54.878	ENSLACG00000013032	ZC3HC1	97	54.878	Latimeria_chalumnae
ENSSSCG00000016565	ZC3HC1	99	54.335	ENSLOCG00000015963	zc3hc1	99	51.969	Lepisosteus_oculatus
ENSSSCG00000016565	ZC3HC1	100	86.759	ENSLAFG00000001292	ZC3HC1	100	86.759	Loxodonta_africana
ENSSSCG00000016565	ZC3HC1	100	91.260	ENSMFAG00000030176	ZC3HC1	100	91.765	Macaca_fascicularis
ENSSSCG00000016565	ZC3HC1	100	91.260	ENSMMUG00000006155	ZC3HC1	100	90.487	Macaca_mulatta
ENSSSCG00000016565	ZC3HC1	100	91.517	ENSMNEG00000011833	ZC3HC1	100	91.036	Macaca_nemestrina
ENSSSCG00000016565	ZC3HC1	100	91.260	ENSMLEG00000027328	ZC3HC1	100	90.837	Mandrillus_leucophaeus
ENSSSCG00000016565	ZC3HC1	99	44.089	ENSMAMG00000010691	zc3hc1	94	44.309	Mastacembelus_armatus
ENSSSCG00000016565	ZC3HC1	99	42.680	ENSMZEG00005007142	zc3hc1	96	43.000	Maylandia_zebra
ENSSSCG00000016565	ZC3HC1	99	61.893	ENSMGAG00000002977	ZC3HC1	97	62.140	Meleagris_gallopavo
ENSSSCG00000016565	ZC3HC1	100	79.188	ENSMAUG00000017032	Zc3hc1	92	79.759	Mesocricetus_auratus
ENSSSCG00000016565	ZC3HC1	100	89.559	ENSMICG00000009167	ZC3HC1	100	89.559	Microcebus_murinus
ENSSSCG00000016565	ZC3HC1	100	85.861	ENSMOCG00000015239	Zc3hc1	100	85.857	Microtus_ochrogaster
ENSSSCG00000016565	ZC3HC1	100	39.609	ENSMMOG00000002204	zc3hc1	99	41.189	Mola_mola
ENSSSCG00000016565	ZC3HC1	94	70.235	ENSMODG00000014630	ZC3HC1	100	64.038	Monodelphis_domestica
ENSSSCG00000016565	ZC3HC1	98	43.358	ENSMALG00000014447	zc3hc1	96	44.064	Monopterus_albus
ENSSSCG00000016565	ZC3HC1	100	84.833	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	83.865	Mus_caroli
ENSSSCG00000016565	ZC3HC1	100	84.833	ENSMUSG00000039130	Zc3hc1	100	84.263	Mus_musculus
ENSSSCG00000016565	ZC3HC1	100	77.689	MGP_PahariEiJ_G0021941	Zc3hc1	100	77.689	Mus_pahari
ENSSSCG00000016565	ZC3HC1	100	84.576	MGP_SPRETEiJ_G0029183	Zc3hc1	100	84.462	Mus_spretus
ENSSSCG00000016565	ZC3HC1	95	89.353	ENSMPUG00000005297	ZC3HC1	95	89.353	Mustela_putorius_furo
ENSSSCG00000016565	ZC3HC1	87	82.799	ENSMLUG00000029228	-	99	82.799	Myotis_lucifugus
ENSSSCG00000016565	ZC3HC1	100	88.462	ENSMLUG00000000063	-	100	88.317	Myotis_lucifugus
ENSSSCG00000016565	ZC3HC1	100	85.385	ENSNGAG00000019014	Zc3hc1	100	85.089	Nannospalax_galili
ENSSSCG00000016565	ZC3HC1	99	42.786	ENSNBRG00000004577	zc3hc1	96	43.086	Neolamprologus_brichardi
ENSSSCG00000016565	ZC3HC1	99	89.948	ENSNLEG00000012698	ZC3HC1	99	89.421	Nomascus_leucogenys
ENSSSCG00000016565	ZC3HC1	100	78.920	ENSMEUG00000011023	ZC3HC1	100	77.689	Notamacropus_eugenii
ENSSSCG00000016565	ZC3HC1	76	82.558	ENSOPRG00000007867	-	68	82.558	Ochotona_princeps
ENSSSCG00000016565	ZC3HC1	100	84.661	ENSODEG00000014604	ZC3HC1	100	84.661	Octodon_degus
ENSSSCG00000016565	ZC3HC1	95	47.337	ENSONIG00000011644	zc3hc1	95	43.750	Oreochromis_niloticus
ENSSSCG00000016565	ZC3HC1	100	68.514	ENSOANG00000011460	ZC3HC1	100	69.612	Ornithorhynchus_anatinus
ENSSSCG00000016565	ZC3HC1	100	85.743	ENSOCUG00000017137	ZC3HC1	100	85.743	Oryctolagus_cuniculus
ENSSSCG00000016565	ZC3HC1	99	42.857	ENSORLG00000014409	zc3hc1	95	42.685	Oryzias_latipes
ENSSSCG00000016565	ZC3HC1	99	43.358	ENSORLG00020015874	zc3hc1	95	43.086	Oryzias_latipes_hni
ENSSSCG00000016565	ZC3HC1	99	43.108	ENSORLG00015014641	zc3hc1	95	42.886	Oryzias_latipes_hsok
ENSSSCG00000016565	ZC3HC1	99	44.784	ENSOMEG00000020604	zc3hc1	95	44.040	Oryzias_melastigma
ENSSSCG00000016565	ZC3HC1	99	45.619	ENSOMEG00000000215	zc3hc1	95	44.694	Oryzias_melastigma
ENSSSCG00000016565	ZC3HC1	99	86.340	ENSOGAG00000026193	ZC3HC1	100	82.669	Otolemur_garnettii
ENSSSCG00000016565	ZC3HC1	100	91.485	ENSOARG00000004907	ZC3HC1	99	91.485	Ovis_aries
ENSSSCG00000016565	ZC3HC1	99	91.495	ENSPPAG00000043172	ZC3HC1	99	90.619	Pan_paniscus
ENSSSCG00000016565	ZC3HC1	100	88.845	ENSPPRG00000001004	ZC3HC1	100	88.845	Panthera_pardus
ENSSSCG00000016565	ZC3HC1	100	89.243	ENSPTIG00000007823	ZC3HC1	100	89.243	Panthera_tigris_altaica
ENSSSCG00000016565	ZC3HC1	99	91.495	ENSPTRG00000019685	ZC3HC1	99	90.419	Pan_troglodytes
ENSSSCG00000016565	ZC3HC1	100	91.260	ENSPANG00000014229	ZC3HC1	100	90.487	Papio_anubis
ENSSSCG00000016565	ZC3HC1	95	51.385	ENSPKIG00000007172	zc3hc1	97	48.671	Paramormyrops_kingsleyae
ENSSSCG00000016565	ZC3HC1	100	61.965	ENSPSIG00000016646	ZC3HC1	100	59.844	Pelodiscus_sinensis
ENSSSCG00000016565	ZC3HC1	95	42.654	ENSPMGG00000003548	zc3hc1	95	41.943	Periophthalmus_magnuspinnatus
ENSSSCG00000016565	ZC3HC1	100	85.259	ENSPEMG00000000514	Zc3hc1	100	86.471	Peromyscus_maniculatus_bairdii
ENSSSCG00000016565	ZC3HC1	100	78.920	ENSPCIG00000020619	ZC3HC1	100	78.920	Phascolarctos_cinereus
ENSSSCG00000016565	ZC3HC1	100	42.963	ENSPFOG00000003466	zc3hc1	96	42.944	Poecilia_formosa
ENSSSCG00000016565	ZC3HC1	100	41.809	ENSPLAG00000022211	zc3hc1	96	42.020	Poecilia_latipinna
ENSSSCG00000016565	ZC3HC1	100	42.963	ENSPMEG00000001458	zc3hc1	96	42.944	Poecilia_mexicana
ENSSSCG00000016565	ZC3HC1	100	41.809	ENSPREG00000004004	zc3hc1	96	42.222	Poecilia_reticulata
ENSSSCG00000016565	ZC3HC1	99	82.051	ENSPPYG00000017998	ZC3HC1	99	81.909	Pongo_abelii
ENSSSCG00000016565	ZC3HC1	100	84.576	ENSPCAG00000001182	ZC3HC1	100	85.000	Procavia_capensis
ENSSSCG00000016565	ZC3HC1	100	90.746	ENSPCOG00000017354	ZC3HC1	100	90.637	Propithecus_coquereli
ENSSSCG00000016565	ZC3HC1	100	84.661	ENSPVAG00000003195	ZC3HC1	100	84.661	Pteropus_vampyrus
ENSSSCG00000016565	ZC3HC1	99	42.680	ENSPNYG00000020692	zc3hc1	96	43.000	Pundamilia_nyererei
ENSSSCG00000016565	ZC3HC1	98	43.590	ENSPNAG00000020746	zc3hc1	95	44.328	Pygocentrus_nattereri
ENSSSCG00000016565	ZC3HC1	100	84.833	ENSRNOG00000010154	Zc3hc1	100	84.294	Rattus_norvegicus
ENSSSCG00000016565	ZC3HC1	100	90.746	ENSRBIG00000029409	ZC3HC1	100	91.170	Rhinopithecus_bieti
ENSSSCG00000016565	ZC3HC1	100	90.746	ENSRROG00000041831	ZC3HC1	100	90.438	Rhinopithecus_roxellana
ENSSSCG00000016565	ZC3HC1	84	95.652	ENSSBOG00000032787	ZC3HC1	100	88.197	Saimiri_boliviensis_boliviensis
ENSSSCG00000016565	ZC3HC1	100	79.177	ENSSHAG00000002529	ZC3HC1	100	78.280	Sarcophilus_harrisii
ENSSSCG00000016565	ZC3HC1	99	51.015	ENSSFOG00015003667	zc3hc1	91	49.390	Scleropages_formosus
ENSSSCG00000016565	ZC3HC1	99	43.069	ENSSMAG00000000647	zc3hc1	86	43.750	Scophthalmus_maximus
ENSSSCG00000016565	ZC3HC1	99	45.000	ENSSDUG00000004241	zc3hc1	93	44.219	Seriola_dumerili
ENSSSCG00000016565	ZC3HC1	99	44.750	ENSSLDG00000025056	zc3hc1	93	43.713	Seriola_lalandi_dorsalis
ENSSSCG00000016565	ZC3HC1	99	77.844	ENSSARG00000012013	ZC3HC1	99	77.844	Sorex_araneus
ENSSSCG00000016565	ZC3HC1	94	56.486	ENSSPUG00000000778	ZC3HC1	86	57.143	Sphenodon_punctatus
ENSSSCG00000016565	ZC3HC1	99	43.781	ENSSPAG00000020041	zc3hc1	95	44.219	Stegastes_partitus
ENSSSCG00000016565	ZC3HC1	63	59.184	ENSTGUG00000016262	ZC3HC1	100	59.184	Taeniopygia_guttata
ENSSSCG00000016565	ZC3HC1	100	41.250	ENSTRUG00000020077	zc3hc1	95	41.942	Takifugu_rubripes
ENSSSCG00000016565	ZC3HC1	100	42.821	ENSTNIG00000007585	zc3hc1	99	42.857	Tetraodon_nigroviridis
ENSSSCG00000016565	ZC3HC1	94	88.187	ENSTBEG00000005216	ZC3HC1	99	78.842	Tupaia_belangeri
ENSSSCG00000016565	ZC3HC1	100	90.256	ENSTTRG00000008458	ZC3HC1	100	90.625	Tursiops_truncatus
ENSSSCG00000016565	ZC3HC1	100	91.036	ENSUAMG00000020249	ZC3HC1	100	91.036	Ursus_americanus
ENSSSCG00000016565	ZC3HC1	100	90.637	ENSUMAG00000009268	ZC3HC1	100	90.637	Ursus_maritimus
ENSSSCG00000016565	ZC3HC1	90	91.837	ENSVPAG00000010846	ZC3HC1	77	91.837	Vicugna_pacos
ENSSSCG00000016565	ZC3HC1	96	90.000	ENSVVUG00000012386	ZC3HC1	99	90.000	Vulpes_vulpes
ENSSSCG00000016565	ZC3HC1	94	51.359	ENSXETG00000033900	zc3hc1	95	52.026	Xenopus_tropicalis
ENSSSCG00000016565	ZC3HC1	100	42.574	ENSXCOG00000013570	zc3hc1	97	44.081	Xiphophorus_couchianus
ENSSSCG00000016565	ZC3HC1	100	42.822	ENSXMAG00000010979	zc3hc1	95	44.009	Xiphophorus_maculatus