EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000016572 (Gene tree)
Gene ID: 100515455
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 118270 bases
Position: chr18:19554894-19673163
Accession: 100515455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017556	Xpo1	PF08389.12	2.2e-28	1	1
ENSSSCP00000048878	Xpo1	PF08389.12	2.5e-28	1	1
ENSSSCP00000058996	Xpo1	PF08389.12	2.5e-28	1	1
ENSSSCP00000056500	Xpo1	PF08389.12	5.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000056092	TNPO3-203	6034	XM_013990808	ENSSSCP00000048878	923 (aa)	XP_013846262	A0A287AXL5
ENSSSCT00000018042	TNPO3-204	2844	XM_013990809	ENSSSCP00000017556	857 (aa)	XP_013846263	F1SMQ0
ENSSSCT00000055796	TNPO3-201	3567	-	ENSSSCP00000058996	923 (aa)	-	A0A287AXL5
ENSSSCT00000052750	TNPO3-202	3448	-	ENSSSCP00000056500	451 (aa)	-	A0A287BIZ1

Gene Model

Click here to download ENSSSCG00000016572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016572	TNPO3	100	99.883	ENSG00000064419	TNPO3	100	99.883	Homo_sapiens
ENSSSCG00000016572	TNPO3	100	86.581	ENSAPOG00000018347	tnpo3	100	86.566	Acanthochromis_polyacanthus
ENSSSCG00000016572	TNPO3	99	96.324	ENSAMEG00000005135	TNPO3	98	96.324	Ailuropoda_melanoleuca
ENSSSCG00000016572	TNPO3	100	84.247	ENSACIG00000005897	tnpo3	99	84.145	Amphilophus_citrinellus
ENSSSCG00000016572	TNPO3	100	86.698	ENSAOCG00000008264	tnpo3	100	86.674	Amphiprion_ocellaris
ENSSSCG00000016572	TNPO3	100	86.698	ENSAPEG00000024300	tnpo3	100	86.636	Amphiprion_percula
ENSSSCG00000016572	TNPO3	100	85.648	ENSATEG00000003197	tnpo3	100	85.590	Anabas_testudineus
ENSSSCG00000016572	TNPO3	88	90.201	ENSAPLG00000005946	TNPO3	91	94.340	Anas_platyrhynchos
ENSSSCG00000016572	TNPO3	93	91.148	ENSACAG00000013470	TNPO3	95	92.773	Anolis_carolinensis
ENSSSCG00000016572	TNPO3	100	99.650	ENSANAG00000037940	TNPO3	100	99.567	Aotus_nancymaae
ENSSSCG00000016572	TNPO3	100	85.998	ENSACLG00000005561	tnpo3	100	85.915	Astatotilapia_calliptera
ENSSSCG00000016572	TNPO3	100	86.241	ENSAMXG00000016236	tnpo3	100	86.241	Astyanax_mexicanus
ENSSSCG00000016572	TNPO3	100	99.183	ENSBTAG00000004992	TNPO3	100	99.183	Bos_taurus
ENSSSCG00000016572	TNPO3	100	99.650	ENSCJAG00000018085	TNPO3	100	99.567	Callithrix_jacchus
ENSSSCG00000016572	TNPO3	100	100.000	ENSCAFG00000001543	TNPO3	100	99.892	Canis_familiaris
ENSSSCG00000016572	TNPO3	100	100.000	ENSCAFG00020022462	TNPO3	99	99.459	Canis_lupus_dingo
ENSSSCG00000016572	TNPO3	100	99.300	ENSCHIG00000011721	TNPO3	100	99.133	Capra_hircus
ENSSSCG00000016572	TNPO3	100	99.767	ENSTSYG00000002989	TNPO3	100	99.675	Carlito_syrichta
ENSSSCG00000016572	TNPO3	76	97.849	ENSCAPG00000005843	TNPO3	91	97.849	Cavia_aperea
ENSSSCG00000016572	TNPO3	100	99.300	ENSCPOG00000039784	TNPO3	100	99.242	Cavia_porcellus
ENSSSCG00000016572	TNPO3	100	99.767	ENSCCAG00000033826	TNPO3	100	99.767	Cebus_capucinus
ENSSSCG00000016572	TNPO3	100	99.883	ENSCATG00000030018	TNPO3	100	99.883	Cercocebus_atys
ENSSSCG00000016572	TNPO3	100	98.722	ENSCLAG00000016298	TNPO3	100	98.706	Chinchilla_lanigera
ENSSSCG00000016572	TNPO3	100	99.767	ENSCSAG00000009966	TNPO3	100	99.675	Chlorocebus_sabaeus
ENSSSCG00000016572	TNPO3	96	74.443	ENSCHOG00000011547	TNPO3	99	70.978	Choloepus_hoffmanni
ENSSSCG00000016572	TNPO3	100	94.866	ENSCPBG00000017497	TNPO3	100	94.866	Chrysemys_picta_bellii
ENSSSCG00000016572	TNPO3	99	48.911	ENSCING00000005042	-	99	48.911	Ciona_intestinalis
ENSSSCG00000016572	TNPO3	99	47.219	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSSSCG00000016572	TNPO3	100	99.883	ENSCANG00000033070	TNPO3	100	99.883	Colobus_angolensis_palliatus
ENSSSCG00000016572	TNPO3	100	99.533	ENSCGRG00001015925	Tnpo3	100	99.458	Cricetulus_griseus_chok1gshd
ENSSSCG00000016572	TNPO3	100	99.533	ENSCGRG00000010379	Tnpo3	100	99.458	Cricetulus_griseus_crigri
ENSSSCG00000016572	TNPO3	100	84.947	ENSCSEG00000005952	tnpo3	100	84.832	Cynoglossus_semilaevis
ENSSSCG00000016572	TNPO3	100	85.764	ENSCVAG00000020285	tnpo3	100	85.699	Cyprinodon_variegatus
ENSSSCG00000016572	TNPO3	100	85.807	ENSDARG00000045680	tnpo3	100	85.807	Danio_rerio
ENSSSCG00000016572	TNPO3	100	99.883	ENSDNOG00000002556	TNPO3	100	99.783	Dasypus_novemcinctus
ENSSSCG00000016572	TNPO3	96	97.222	ENSDORG00000002433	Tnpo3	95	97.409	Dipodomys_ordii
ENSSSCG00000016572	TNPO3	100	42.578	FBgn0031456	Tnpo-SR	99	42.519	Drosophila_melanogaster
ENSSSCG00000016572	TNPO3	95	99.341	ENSETEG00000002101	TNPO3	90	99.341	Echinops_telfairi
ENSSSCG00000016572	TNPO3	100	71.289	ENSEBUG00000016931	tnpo3	100	71.289	Eptatretus_burgeri
ENSSSCG00000016572	TNPO3	100	99.767	ENSEASG00005008677	TNPO3	100	99.675	Equus_asinus_asinus
ENSSSCG00000016572	TNPO3	100	99.767	ENSECAG00000012815	TNPO3	100	99.767	Equus_caballus
ENSSSCG00000016572	TNPO3	99	94.050	ENSEEUG00000005178	TNPO3	98	93.617	Erinaceus_europaeus
ENSSSCG00000016572	TNPO3	61	32.701	ENSEEUG00000011681	IPO13	71	30.806	Erinaceus_europaeus
ENSSSCG00000016572	TNPO3	100	87.165	ENSELUG00000012153	tnpo3	99	86.942	Esox_lucius
ENSSSCG00000016572	TNPO3	100	100.000	ENSFCAG00000018186	TNPO3	100	100.000	Felis_catus
ENSSSCG00000016572	TNPO3	100	89.437	ENSFALG00000010667	TNPO3	100	89.632	Ficedula_albicollis
ENSSSCG00000016572	TNPO3	100	99.185	ENSFDAG00000019578	TNPO3	100	99.135	Fukomys_damarensis
ENSSSCG00000016572	TNPO3	100	85.764	ENSFHEG00000012859	tnpo3	100	85.699	Fundulus_heteroclitus
ENSSSCG00000016572	TNPO3	100	85.590	ENSGMOG00000007324	tnpo3	100	85.590	Gadus_morhua
ENSSSCG00000016572	TNPO3	95	92.558	ENSGALG00000039420	TNPO3	98	94.128	Gallus_gallus
ENSSSCG00000016572	TNPO3	65	85.223	ENSGAFG00000017639	tnpo3	100	85.223	Gambusia_affinis
ENSSSCG00000016572	TNPO3	100	85.807	ENSGACG00000000699	tnpo3	100	85.807	Gasterosteus_aculeatus
ENSSSCG00000016572	TNPO3	100	94.749	ENSGAGG00000006777	TNPO3	100	94.749	Gopherus_agassizii
ENSSSCG00000016572	TNPO3	100	99.883	ENSGGOG00000008339	TNPO3	100	99.883	Gorilla_gorilla
ENSSSCG00000016572	TNPO3	100	85.998	ENSHBUG00000008351	tnpo3	100	85.915	Haplochromis_burtoni
ENSSSCG00000016572	TNPO3	100	99.767	ENSHGLG00000004463	TNPO3	100	99.675	Heterocephalus_glaber_female
ENSSSCG00000016572	TNPO3	100	99.767	ENSHGLG00100005509	TNPO3	100	99.675	Heterocephalus_glaber_male
ENSSSCG00000016572	TNPO3	100	85.414	ENSHCOG00000007221	tnpo3	100	85.265	Hippocampus_comes
ENSSSCG00000016572	TNPO3	100	85.181	ENSIPUG00000014979	TNPO3	99	85.157	Ictalurus_punctatus
ENSSSCG00000016572	TNPO3	100	99.883	ENSSTOG00000004885	TNPO3	100	99.883	Ictidomys_tridecemlineatus
ENSSSCG00000016572	TNPO3	99	94.767	ENSJJAG00000013530	Tnpo3	100	92.557	Jaculus_jaculus
ENSSSCG00000016572	TNPO3	100	85.915	ENSKMAG00000010497	tnpo3	100	85.915	Kryptolebias_marmoratus
ENSSSCG00000016572	TNPO3	97	86.675	ENSLBEG00000016595	tnpo3	100	84.371	Labrus_bergylta
ENSSSCG00000016572	TNPO3	100	81.680	ENSLBEG00000011988	-	99	81.767	Labrus_bergylta
ENSSSCG00000016572	TNPO3	84	90.270	ENSLACG00000002351	TNPO3	99	90.270	Latimeria_chalumnae
ENSSSCG00000016572	TNPO3	100	87.757	ENSLOCG00000015556	tnpo3	100	87.757	Lepisosteus_oculatus
ENSSSCG00000016572	TNPO3	100	99.187	ENSLAFG00000002738	TNPO3	100	99.137	Loxodonta_africana
ENSSSCG00000016572	TNPO3	100	99.883	ENSMFAG00000032385	TNPO3	100	99.883	Macaca_fascicularis
ENSSSCG00000016572	TNPO3	100	99.883	ENSMMUG00000004311	TNPO3	100	99.883	Macaca_mulatta
ENSSSCG00000016572	TNPO3	100	99.883	ENSMNEG00000045277	TNPO3	100	99.883	Macaca_nemestrina
ENSSSCG00000016572	TNPO3	100	99.883	ENSMLEG00000037881	TNPO3	100	99.883	Mandrillus_leucophaeus
ENSSSCG00000016572	TNPO3	100	86.348	ENSMAMG00000021096	tnpo3	100	86.241	Mastacembelus_armatus
ENSSSCG00000016572	TNPO3	100	85.998	ENSMZEG00005015084	tnpo3	100	85.915	Maylandia_zebra
ENSSSCG00000016572	TNPO3	88	92.172	ENSMGAG00000002839	TNPO3	99	89.241	Meleagris_gallopavo
ENSSSCG00000016572	TNPO3	100	99.417	ENSMAUG00000013463	Tnpo3	100	99.350	Mesocricetus_auratus
ENSSSCG00000016572	TNPO3	100	100.000	ENSMICG00000000140	TNPO3	100	99.892	Microcebus_murinus
ENSSSCG00000016572	TNPO3	68	35.659	ENSMICG00000011003	IPO13	76	32.919	Microcebus_murinus
ENSSSCG00000016572	TNPO3	100	99.533	ENSMOCG00000013264	Tnpo3	100	99.458	Microtus_ochrogaster
ENSSSCG00000016572	TNPO3	100	85.414	ENSMMOG00000005887	tnpo3	100	85.265	Mola_mola
ENSSSCG00000016572	TNPO3	100	97.833	ENSMODG00000014700	TNPO3	100	97.833	Monodelphis_domestica
ENSSSCG00000016572	TNPO3	100	85.699	ENSMALG00000006675	tnpo3	100	85.699	Monopterus_albus
ENSSSCG00000016572	TNPO3	100	99.417	MGP_CAROLIEiJ_G0028176	Tnpo3	100	99.350	Mus_caroli
ENSSSCG00000016572	TNPO3	100	99.417	ENSMUSG00000012535	Tnpo3	100	99.350	Mus_musculus
ENSSSCG00000016572	TNPO3	100	99.300	MGP_PahariEiJ_G0021934	Tnpo3	100	99.242	Mus_pahari
ENSSSCG00000016572	TNPO3	100	99.300	MGP_SPRETEiJ_G0029176	Tnpo3	100	99.242	Mus_spretus
ENSSSCG00000016572	TNPO3	100	100.000	ENSMPUG00000006021	TNPO3	100	99.892	Mustela_putorius_furo
ENSSSCG00000016572	TNPO3	100	89.274	ENSMLUG00000000947	TNPO3	100	89.274	Myotis_lucifugus
ENSSSCG00000016572	TNPO3	100	99.883	ENSNGAG00000008722	Tnpo3	100	99.783	Nannospalax_galili
ENSSSCG00000016572	TNPO3	100	84.290	ENSNBRG00000019001	tnpo3	100	85.569	Neolamprologus_brichardi
ENSSSCG00000016572	TNPO3	100	96.029	ENSNLEG00000012491	TNPO3	100	96.029	Nomascus_leucogenys
ENSSSCG00000016572	TNPO3	89	95.172	ENSMEUG00000002445	TNPO3	83	95.172	Notamacropus_eugenii
ENSSSCG00000016572	TNPO3	90	100.000	ENSOPRG00000006163	TNPO3	90	98.913	Ochotona_princeps
ENSSSCG00000016572	TNPO3	98	99.283	ENSODEG00000012826	TNPO3	100	99.224	Octodon_degus
ENSSSCG00000016572	TNPO3	100	86.231	ENSONIG00000007604	tnpo3	100	86.132	Oreochromis_niloticus
ENSSSCG00000016572	TNPO3	99	93.073	ENSOANG00000011451	TNPO3	100	93.268	Ornithorhynchus_anatinus
ENSSSCG00000016572	TNPO3	99	95.903	ENSOCUG00000010105	TNPO3	99	95.903	Oryctolagus_cuniculus
ENSSSCG00000016572	TNPO3	100	84.832	ENSORLG00000029369	tnpo3	100	84.832	Oryzias_latipes
ENSSSCG00000016572	TNPO3	100	84.832	ENSORLG00020003464	tnpo3	100	84.832	Oryzias_latipes_hni
ENSSSCG00000016572	TNPO3	100	84.940	ENSORLG00015002610	tnpo3	100	84.940	Oryzias_latipes_hsok
ENSSSCG00000016572	TNPO3	100	85.049	ENSOMEG00000021006	tnpo3	100	85.049	Oryzias_melastigma
ENSSSCG00000016572	TNPO3	100	99.767	ENSOGAG00000015340	TNPO3	100	99.675	Otolemur_garnettii
ENSSSCG00000016572	TNPO3	100	99.067	ENSOARG00000004026	TNPO3	100	98.917	Ovis_aries
ENSSSCG00000016572	TNPO3	100	99.883	ENSPPAG00000034975	TNPO3	100	99.883	Pan_paniscus
ENSSSCG00000016572	TNPO3	100	100.000	ENSPPRG00000002050	TNPO3	100	99.892	Panthera_pardus
ENSSSCG00000016572	TNPO3	100	100.000	ENSPTIG00000016167	TNPO3	100	99.892	Panthera_tigris_altaica
ENSSSCG00000016572	TNPO3	100	99.883	ENSPTRG00000019676	TNPO3	100	99.883	Pan_troglodytes
ENSSSCG00000016572	TNPO3	98	99.762	ENSPANG00000022226	TNPO3	99	99.669	Papio_anubis
ENSSSCG00000016572	TNPO3	100	83.781	ENSPKIG00000023234	tnpo3	100	83.749	Paramormyrops_kingsleyae
ENSSSCG00000016572	TNPO3	100	80.670	ENSPKIG00000008628	-	100	80.670	Paramormyrops_kingsleyae
ENSSSCG00000016572	TNPO3	81	90.984	ENSPSIG00000006156	-	94	92.683	Pelodiscus_sinensis
ENSSSCG00000016572	TNPO3	86	82.902	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSSSCG00000016572	TNPO3	100	99.417	ENSPEMG00000000422	Tnpo3	100	99.350	Peromyscus_maniculatus_bairdii
ENSSSCG00000016572	TNPO3	100	72.410	ENSPMAG00000008621	tnpo3	100	72.933	Petromyzon_marinus
ENSSSCG00000016572	TNPO3	100	97.291	ENSPCIG00000011366	TNPO3	100	97.291	Phascolarctos_cinereus
ENSSSCG00000016572	TNPO3	100	85.590	ENSPFOG00000013592	tnpo3	99	85.590	Poecilia_formosa
ENSSSCG00000016572	TNPO3	100	85.590	ENSPLAG00000010188	tnpo3	100	85.590	Poecilia_latipinna
ENSSSCG00000016572	TNPO3	100	85.699	ENSPMEG00000022731	tnpo3	100	85.699	Poecilia_mexicana
ENSSSCG00000016572	TNPO3	65	85.223	ENSPREG00000019847	tnpo3	100	85.223	Poecilia_reticulata
ENSSSCG00000016572	TNPO3	100	99.883	ENSPPYG00000017990	TNPO3	100	99.783	Pongo_abelii
ENSSSCG00000016572	TNPO3	99	88.562	ENSPCAG00000010158	TNPO3	98	88.562	Procavia_capensis
ENSSSCG00000016572	TNPO3	88	100.000	ENSPCOG00000023901	TNPO3	97	100.000	Propithecus_coquereli
ENSSSCG00000016572	TNPO3	96	97.685	ENSPVAG00000015757	TNPO3	98	92.752	Pteropus_vampyrus
ENSSSCG00000016572	TNPO3	100	85.998	ENSPNYG00000002349	tnpo3	100	85.915	Pundamilia_nyererei
ENSSSCG00000016572	TNPO3	100	87.048	ENSPNAG00000001142	tnpo3	100	86.999	Pygocentrus_nattereri
ENSSSCG00000016572	TNPO3	100	99.300	ENSRNOG00000021758	Tnpo3	100	99.300	Rattus_norvegicus
ENSSSCG00000016572	TNPO3	100	99.767	ENSRBIG00000042549	TNPO3	100	99.767	Rhinopithecus_bieti
ENSSSCG00000016572	TNPO3	100	99.767	ENSRROG00000039264	TNPO3	100	99.675	Rhinopithecus_roxellana
ENSSSCG00000016572	TNPO3	96	86.806	ENSSBOG00000029642	TNPO3	100	80.251	Saimiri_boliviensis_boliviensis
ENSSSCG00000016572	TNPO3	100	97.900	ENSSHAG00000006837	TNPO3	100	97.961	Sarcophilus_harrisii
ENSSSCG00000016572	TNPO3	100	84.947	ENSSFOG00015001474	tnpo3	100	84.832	Scleropages_formosus
ENSSSCG00000016572	TNPO3	100	80.983	ENSSFOG00015004256	tnpo3	100	80.983	Scleropages_formosus
ENSSSCG00000016572	TNPO3	100	86.241	ENSSMAG00000010422	tnpo3	97	86.241	Scophthalmus_maximus
ENSSSCG00000016572	TNPO3	100	86.698	ENSSDUG00000004850	tnpo3	100	86.674	Seriola_dumerili
ENSSSCG00000016572	TNPO3	100	86.698	ENSSLDG00000016927	tnpo3	100	86.674	Seriola_lalandi_dorsalis
ENSSSCG00000016572	TNPO3	99	85.957	ENSSARG00000013893	TNPO3	98	86.359	Sorex_araneus
ENSSSCG00000016572	TNPO3	100	87.239	ENSSPUG00000007457	TNPO3	99	87.689	Sphenodon_punctatus
ENSSSCG00000016572	TNPO3	96	84.491	ENSSPAG00000014209	tnpo3	99	87.603	Stegastes_partitus
ENSSSCG00000016572	TNPO3	65	77.397	ENSTRUG00000025251	tnpo3	100	77.397	Takifugu_rubripes
ENSSSCG00000016572	TNPO3	100	84.125	ENSTNIG00000003347	tnpo3	100	84.125	Tetraodon_nigroviridis
ENSSSCG00000016572	TNPO3	88	100.000	ENSTBEG00000007220	TNPO3	90	100.000	Tupaia_belangeri
ENSSSCG00000016572	TNPO3	99	84.664	ENSTTRG00000014618	TNPO3	98	84.664	Tursiops_truncatus
ENSSSCG00000016572	TNPO3	100	100.000	ENSUAMG00000021281	TNPO3	100	99.892	Ursus_americanus
ENSSSCG00000016572	TNPO3	100	100.000	ENSUMAG00000006882	TNPO3	100	99.892	Ursus_maritimus
ENSSSCG00000016572	TNPO3	88	84.629	ENSVPAG00000006166	TNPO3	88	84.629	Vicugna_pacos
ENSSSCG00000016572	TNPO3	100	100.000	ENSVVUG00000011004	TNPO3	100	100.000	Vulpes_vulpes
ENSSSCG00000016572	TNPO3	100	82.937	ENSXETG00000015009	tnpo3	100	82.937	Xenopus_tropicalis
ENSSSCG00000016572	TNPO3	65	84.880	ENSXCOG00000011552	tnpo3	100	84.880	Xiphophorus_couchianus
ENSSSCG00000016572	TNPO3	100	85.374	ENSXMAG00000013062	tnpo3	100	85.374	Xiphophorus_maculatus