EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000016745 (Gene tree)
Gene ID: 100513388
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 9428 bases
Position: chr18:50705606-50715033
Accession: 100513388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017735	ResIII	PF04851.15	3.2e-08	1	1
ENSSSCP00000017735	DEAD	PF00270.29	7.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000018227	-	1944	-	ENSSSCP00000017735	546 (aa)	-	F1SSH6

Gene Model

Click here to download ENSSSCG00000016745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000016745	DDX56	74	33.333	ENSSSCG00000033149	DDX47	80	33.501
ENSSSCG00000016745	DDX56	76	30.660	ENSSSCG00000021275	DDX52	63	30.425
ENSSSCG00000016745	DDX56	73	32.581	ENSSSCG00000022915	DDX27	51	32.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016745	DDX56	100	92.532	ENSG00000136271	DDX56	100	94.164	Homo_sapiens
ENSSSCG00000016745	DDX56	99	63.489	ENSAPOG00000017113	ddx56	99	63.082	Acanthochromis_polyacanthus
ENSSSCG00000016745	DDX56	99	91.697	ENSAMEG00000017711	DDX56	99	91.697	Ailuropoda_melanoleuca
ENSSSCG00000016745	DDX56	92	59.332	ENSACIG00000013747	ddx56	98	65.746	Amphilophus_citrinellus
ENSSSCG00000016745	DDX56	98	63.080	ENSAOCG00000018059	ddx56	99	62.338	Amphiprion_ocellaris
ENSSSCG00000016745	DDX56	88	66.324	ENSAOCG00000015447	-	87	65.503	Amphiprion_ocellaris
ENSSSCG00000016745	DDX56	98	63.752	ENSAPEG00000007267	ddx56	98	63.570	Amphiprion_percula
ENSSSCG00000016745	DDX56	98	64.014	ENSATEG00000005279	ddx56	98	64.014	Anabas_testudineus
ENSSSCG00000016745	DDX56	99	63.472	ENSACLG00000020113	ddx56	98	63.110	Astatotilapia_calliptera
ENSSSCG00000016745	DDX56	98	60.830	ENSAMXG00000019357	ddx56	98	61.372	Astyanax_mexicanus
ENSSSCG00000016745	DDX56	100	94.891	ENSBTAG00000010602	DDX56	100	94.891	Bos_taurus
ENSSSCG00000016745	DDX56	98	40.071	WBGene00016073	C24H12.4	87	39.859	Caenorhabditis_elegans
ENSSSCG00000016745	DDX56	99	92.449	ENSCJAG00000012233	DDX56	99	92.449	Callithrix_jacchus
ENSSSCG00000016745	DDX56	81	91.176	ENSCAFG00000029295	DDX56	99	90.950	Canis_familiaris
ENSSSCG00000016745	DDX56	99	87.477	ENSCAFG00020019695	DDX56	99	87.293	Canis_lupus_dingo
ENSSSCG00000016745	DDX56	100	94.526	ENSCHIG00000014261	DDX56	100	94.526	Capra_hircus
ENSSSCG00000016745	DDX56	100	91.985	ENSTSYG00000008048	DDX56	100	92.714	Carlito_syrichta
ENSSSCG00000016745	DDX56	85	90.129	ENSCAPG00000006286	DDX56	98	90.129	Cavia_aperea
ENSSSCG00000016745	DDX56	100	89.617	ENSCPOG00000003359	DDX56	100	89.617	Cavia_porcellus
ENSSSCG00000016745	DDX56	99	91.529	ENSCCAG00000025303	DDX56	99	92.081	Cebus_capucinus
ENSSSCG00000016745	DDX56	100	92.701	ENSCATG00000039389	DDX56	100	92.701	Cercocebus_atys
ENSSSCG00000016745	DDX56	100	91.241	ENSCLAG00000007666	DDX56	100	91.241	Chinchilla_lanigera
ENSSSCG00000016745	DDX56	100	92.714	ENSCSAG00000015636	DDX56	100	92.714	Chlorocebus_sabaeus
ENSSSCG00000016745	DDX56	98	68.440	ENSCPBG00000024556	DDX56	97	68.566	Chrysemys_picta_bellii
ENSSSCG00000016745	DDX56	91	56.746	ENSCING00000005185	-	97	56.548	Ciona_intestinalis
ENSSSCG00000016745	DDX56	91	54.257	ENSCSAVG00000011266	-	99	53.861	Ciona_savignyi
ENSSSCG00000016745	DDX56	99	92.818	ENSCANG00000028187	DDX56	99	92.818	Colobus_angolensis_palliatus
ENSSSCG00000016745	DDX56	100	89.599	ENSCGRG00001019019	Ddx56	100	89.599	Cricetulus_griseus_chok1gshd
ENSSSCG00000016745	DDX56	100	89.599	ENSCGRG00000011870	Ddx56	100	89.599	Cricetulus_griseus_crigri
ENSSSCG00000016745	DDX56	99	63.458	ENSCSEG00000008368	ddx56	99	63.636	Cynoglossus_semilaevis
ENSSSCG00000016745	DDX56	99	64.973	ENSCVAG00000006499	ddx56	98	64.610	Cyprinodon_variegatus
ENSSSCG00000016745	DDX56	98	63.834	ENSDARG00000020913	ddx56	99	64.376	Danio_rerio
ENSSSCG00000016745	DDX56	86	88.161	ENSDNOG00000036526	DDX56	99	88.161	Dasypus_novemcinctus
ENSSSCG00000016745	DDX56	95	49.328	FBgn0001565	Hlc	91	48.944	Drosophila_melanogaster
ENSSSCG00000016745	DDX56	83	80.392	ENSETEG00000002969	-	82	80.392	Echinops_telfairi
ENSSSCG00000016745	DDX56	87	61.426	ENSETEG00000019559	-	100	59.958	Echinops_telfairi
ENSSSCG00000016745	DDX56	98	58.303	ENSEBUG00000009986	ddx56	99	59.165	Eptatretus_burgeri
ENSSSCG00000016745	DDX56	99	94.649	ENSEASG00005017795	DDX56	99	94.649	Equus_asinus_asinus
ENSSSCG00000016745	DDX56	99	94.465	ENSECAG00000019897	DDX56	99	94.465	Equus_caballus
ENSSSCG00000016745	DDX56	86	91.121	ENSEEUG00000004849	DDX56	99	91.121	Erinaceus_europaeus
ENSSSCG00000016745	DDX56	97	65.867	ENSELUG00000004150	ddx56	97	66.236	Esox_lucius
ENSSSCG00000016745	DDX56	99	92.251	ENSFCAG00000010261	DDX56	99	92.804	Felis_catus
ENSSSCG00000016745	DDX56	100	90.146	ENSFDAG00000007128	DDX56	100	90.146	Fukomys_damarensis
ENSSSCG00000016745	DDX56	98	64.378	ENSFHEG00000018008	ddx56	97	66.405	Fundulus_heteroclitus
ENSSSCG00000016745	DDX56	98	61.510	ENSGAFG00000006906	ddx56	98	61.510	Gambusia_affinis
ENSSSCG00000016745	DDX56	93	71.906	ENSGAGG00000006789	DDX56	90	71.654	Gopherus_agassizii
ENSSSCG00000016745	DDX56	100	92.532	ENSGGOG00000012031	DDX56	100	92.532	Gorilla_gorilla
ENSSSCG00000016745	DDX56	92	61.569	ENSHBUG00000015246	ddx56	92	61.047	Haplochromis_burtoni
ENSSSCG00000016745	DDX56	100	91.423	ENSHGLG00000017271	DDX56	100	91.423	Heterocephalus_glaber_female
ENSSSCG00000016745	DDX56	100	91.423	ENSHGLG00100015731	DDX56	100	91.423	Heterocephalus_glaber_male
ENSSSCG00000016745	DDX56	99	63.472	ENSHCOG00000001685	ddx56	99	63.091	Hippocampus_comes
ENSSSCG00000016745	DDX56	98	62.500	ENSIPUG00000006602	ddx56	96	61.957	Ictalurus_punctatus
ENSSSCG00000016745	DDX56	99	91.144	ENSSTOG00000000464	DDX56	99	91.144	Ictidomys_tridecemlineatus
ENSSSCG00000016745	DDX56	99	90.556	ENSJJAG00000014269	Ddx56	99	90.556	Jaculus_jaculus
ENSSSCG00000016745	DDX56	98	63.309	ENSKMAG00000016611	ddx56	98	63.538	Kryptolebias_marmoratus
ENSSSCG00000016745	DDX56	98	63.406	ENSLBEG00000026281	ddx56	98	63.768	Labrus_bergylta
ENSSSCG00000016745	DDX56	99	66.362	ENSLACG00000015551	DDX56	96	66.910	Latimeria_chalumnae
ENSSSCG00000016745	DDX56	99	64.273	ENSLOCG00000015185	ddx56	98	64.273	Lepisosteus_oculatus
ENSSSCG00000016745	DDX56	99	92.022	ENSLAFG00000018206	DDX56	98	92.022	Loxodonta_africana
ENSSSCG00000016745	DDX56	100	92.883	ENSMFAG00000041001	DDX56	100	92.883	Macaca_fascicularis
ENSSSCG00000016745	DDX56	100	92.883	ENSMMUG00000002645	DDX56	100	92.883	Macaca_mulatta
ENSSSCG00000016745	DDX56	100	92.701	ENSMNEG00000028492	DDX56	100	92.701	Macaca_nemestrina
ENSSSCG00000016745	DDX56	100	92.883	ENSMLEG00000043591	DDX56	100	92.883	Mandrillus_leucophaeus
ENSSSCG00000016745	DDX56	98	64.845	ENSMAMG00000007776	ddx56	98	65.209	Mastacembelus_armatus
ENSSSCG00000016745	DDX56	99	63.472	ENSMZEG00005009813	ddx56	98	63.110	Maylandia_zebra
ENSSSCG00000016745	DDX56	100	92.896	ENSMICG00000005550	DDX56	100	92.896	Microcebus_murinus
ENSSSCG00000016745	DDX56	100	89.781	ENSMOCG00000016782	Ddx56	100	89.781	Microtus_ochrogaster
ENSSSCG00000016745	DDX56	90	67.200	ENSMMOG00000009654	ddx56	94	67.400	Mola_mola
ENSSSCG00000016745	DDX56	100	75.455	ENSMODG00000016137	DDX56	99	74.727	Monodelphis_domestica
ENSSSCG00000016745	DDX56	68	62.933	ENSMALG00000016910	ddx56	99	62.933	Monopterus_albus
ENSSSCG00000016745	DDX56	100	88.869	MGP_CAROLIEiJ_G0016069	Ddx56	100	88.869	Mus_caroli
ENSSSCG00000016745	DDX56	100	89.051	ENSMUSG00000004393	Ddx56	100	89.051	Mus_musculus
ENSSSCG00000016745	DDX56	100	89.416	MGP_PahariEiJ_G0016822	Ddx56	100	89.416	Mus_pahari
ENSSSCG00000016745	DDX56	100	89.051	MGP_SPRETEiJ_G0016911	Ddx56	100	89.051	Mus_spretus
ENSSSCG00000016745	DDX56	99	90.775	ENSMPUG00000018196	DDX56	87	90.775	Mustela_putorius_furo
ENSSSCG00000016745	DDX56	99	93.358	ENSMLUG00000003509	DDX56	99	93.542	Myotis_lucifugus
ENSSSCG00000016745	DDX56	99	91.667	ENSNGAG00000018785	Ddx56	99	91.667	Nannospalax_galili
ENSSSCG00000016745	DDX56	92	63.762	ENSNBRG00000002656	ddx56	92	63.209	Neolamprologus_brichardi
ENSSSCG00000016745	DDX56	100	92.896	ENSNLEG00000003816	DDX56	100	92.896	Nomascus_leucogenys
ENSSSCG00000016745	DDX56	91	76.707	ENSMEUG00000006788	DDX56	100	76.707	Notamacropus_eugenii
ENSSSCG00000016745	DDX56	99	88.950	ENSOPRG00000000292	-	99	88.950	Ochotona_princeps
ENSSSCG00000016745	DDX56	69	93.634	ENSODEG00000014807	DDX56	100	93.634	Octodon_degus
ENSSSCG00000016745	DDX56	99	65.613	ENSONIG00000011509	ddx56	98	65.613	Oreochromis_niloticus
ENSSSCG00000016745	DDX56	95	69.450	ENSOANG00000006320	-	99	69.187	Ornithorhynchus_anatinus
ENSSSCG00000016745	DDX56	50	81.550	ENSOANG00000010592	-	99	81.550	Ornithorhynchus_anatinus
ENSSSCG00000016745	DDX56	75	69.175	ENSOANG00000015987	-	95	69.175	Ornithorhynchus_anatinus
ENSSSCG00000016745	DDX56	100	87.796	ENSOCUG00000022918	DDX56	100	88.342	Oryctolagus_cuniculus
ENSSSCG00000016745	DDX56	99	65.162	ENSORLG00000001434	ddx56	99	64.260	Oryzias_latipes
ENSSSCG00000016745	DDX56	99	65.162	ENSORLG00020015718	ddx56	95	64.260	Oryzias_latipes_hni
ENSSSCG00000016745	DDX56	99	65.162	ENSORLG00015003004	ddx56	95	64.260	Oryzias_latipes_hsok
ENSSSCG00000016745	DDX56	99	65.036	ENSOMEG00000022072	ddx56	98	64.312	Oryzias_melastigma
ENSSSCG00000016745	DDX56	100	91.075	ENSOGAG00000009981	DDX56	100	91.439	Otolemur_garnettii
ENSSSCG00000016745	DDX56	100	94.526	ENSOARG00000015240	DDX56	100	94.526	Ovis_aries
ENSSSCG00000016745	DDX56	100	88.351	ENSPPAG00000029147	DDX56	100	87.634	Pan_paniscus
ENSSSCG00000016745	DDX56	99	74.312	ENSPPAG00000031263	-	99	73.761	Pan_paniscus
ENSSSCG00000016745	DDX56	99	90.792	ENSPPRG00000014594	DDX56	99	91.713	Panthera_pardus
ENSSSCG00000016745	DDX56	86	89.936	ENSPTIG00000019500	DDX56	91	90.578	Panthera_tigris_altaica
ENSSSCG00000016745	DDX56	93	76.265	ENSPTRG00000052765	-	99	75.681	Pan_troglodytes
ENSSSCG00000016745	DDX56	100	92.168	ENSPTRG00000019147	DDX56	100	92.168	Pan_troglodytes
ENSSSCG00000016745	DDX56	100	92.701	ENSPANG00000002446	DDX56	100	92.701	Papio_anubis
ENSSSCG00000016745	DDX56	97	65.867	ENSPKIG00000018998	ddx56	96	65.065	Paramormyrops_kingsleyae
ENSSSCG00000016745	DDX56	96	65.112	ENSPMGG00000017421	ddx56	99	64.486	Periophthalmus_magnuspinnatus
ENSSSCG00000016745	DDX56	100	83.818	ENSPCIG00000009336	DDX56	99	83.818	Phascolarctos_cinereus
ENSSSCG00000016745	DDX56	98	64.286	ENSPFOG00000018658	ddx56	98	63.768	Poecilia_formosa
ENSSSCG00000016745	DDX56	98	64.286	ENSPLAG00000019208	ddx56	98	63.768	Poecilia_latipinna
ENSSSCG00000016745	DDX56	98	64.286	ENSPMEG00000001775	ddx56	98	63.768	Poecilia_mexicana
ENSSSCG00000016745	DDX56	98	64.220	ENSPREG00000015142	ddx56	98	63.768	Poecilia_reticulata
ENSSSCG00000016745	DDX56	100	92.714	ENSPPYG00000017591	DDX56	100	92.714	Pongo_abelii
ENSSSCG00000016745	DDX56	96	90.440	ENSPCAG00000011499	DDX56	99	90.440	Procavia_capensis
ENSSSCG00000016745	DDX56	100	93.260	ENSPCOG00000024864	DDX56	100	93.260	Propithecus_coquereli
ENSSSCG00000016745	DDX56	88	93.953	ENSPVAG00000000791	DDX56	88	93.953	Pteropus_vampyrus
ENSSSCG00000016745	DDX56	99	63.653	ENSPNYG00000019212	ddx56	98	63.291	Pundamilia_nyererei
ENSSSCG00000016745	DDX56	98	63.873	ENSPNAG00000025446	ddx56	99	64.000	Pygocentrus_nattereri
ENSSSCG00000016745	DDX56	100	90.328	ENSRNOG00000004670	Ddx56	100	90.328	Rattus_norvegicus
ENSSSCG00000016745	DDX56	100	92.532	ENSRBIG00000030140	DDX56	100	92.532	Rhinopithecus_bieti
ENSSSCG00000016745	DDX56	100	92.168	ENSRROG00000044428	DDX56	100	92.168	Rhinopithecus_roxellana
ENSSSCG00000016745	DDX56	97	42.734	YLR276C	-	97	42.388	Saccharomyces_cerevisiae
ENSSSCG00000016745	DDX56	99	91.897	ENSSBOG00000034339	DDX56	99	91.897	Saimiri_boliviensis_boliviensis
ENSSSCG00000016745	DDX56	85	83.761	ENSSHAG00000016615	DDX56	98	83.761	Sarcophilus_harrisii
ENSSSCG00000016745	DDX56	98	65.751	ENSSFOG00015012795	ddx56	97	65.138	Scleropages_formosus
ENSSSCG00000016745	DDX56	98	63.949	ENSSMAG00000011280	ddx56	99	64.684	Scophthalmus_maximus
ENSSSCG00000016745	DDX56	99	64.505	ENSSDUG00000023597	ddx56	98	64.324	Seriola_dumerili
ENSSSCG00000016745	DDX56	99	64.505	ENSSLDG00000018369	ddx56	98	64.324	Seriola_lalandi_dorsalis
ENSSSCG00000016745	DDX56	75	90.028	ENSSARG00000014363	DDX56	78	89.916	Sorex_araneus
ENSSSCG00000016745	DDX56	99	68.921	ENSSPUG00000000784	DDX56	96	68.373	Sphenodon_punctatus
ENSSSCG00000016745	DDX56	92	66.797	ENSSPAG00000009392	ddx56	95	66.538	Stegastes_partitus
ENSSSCG00000016745	DDX56	99	63.536	ENSTRUG00000018623	ddx56	99	63.536	Takifugu_rubripes
ENSSSCG00000016745	DDX56	99	61.388	ENSTNIG00000013593	ddx56	99	61.388	Tetraodon_nigroviridis
ENSSSCG00000016745	DDX56	99	91.513	ENSTBEG00000007119	DDX56	99	91.513	Tupaia_belangeri
ENSSSCG00000016745	DDX56	85	94.850	ENSTTRG00000010552	DDX56	98	94.850	Tursiops_truncatus
ENSSSCG00000016745	DDX56	99	92.066	ENSUAMG00000014194	DDX56	99	92.066	Ursus_americanus
ENSSSCG00000016745	DDX56	99	92.066	ENSUMAG00000009666	DDX56	99	92.066	Ursus_maritimus
ENSSSCG00000016745	DDX56	99	90.775	ENSVVUG00000011905	DDX56	99	91.144	Vulpes_vulpes
ENSSSCG00000016745	DDX56	99	65.823	ENSXETG00000019000	ddx56	99	65.642	Xenopus_tropicalis
ENSSSCG00000016745	DDX56	98	63.080	ENSXCOG00000017413	ddx56	98	63.080	Xiphophorus_couchianus
ENSSSCG00000016745	DDX56	98	64.037	ENSXMAG00000018749	ddx56	98	63.158	Xiphophorus_maculatus