EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000016827 (Gene tree)
Gene ID: 100513502
Gene Symbol: BRIX1
Alias: -
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 11274 bases
Position: chr16:20512301-20523574
Accession: 100513502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017826	Brix	PF04427.18	2.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000018322	-	4248	-	ENSSSCP00000017826	358 (aa)	-	F1SND4

Gene Model

Click here to download ENSSSCG00000016827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016827	BRIX1	99	94.051	ENSG00000113460	BRIX1	100	94.051	Homo_sapiens
ENSSSCG00000016827	BRIX1	95	74.052	ENSAPOG00000020334	bxdc2	98	73.761	Acanthochromis_polyacanthus
ENSSSCG00000016827	BRIX1	99	92.918	ENSAMEG00000003295	BRIX1	100	92.918	Ailuropoda_melanoleuca
ENSSSCG00000016827	BRIX1	90	73.602	ENSACIG00000017003	bxdc2	98	71.681	Amphilophus_citrinellus
ENSSSCG00000016827	BRIX1	85	79.739	ENSAOCG00000000941	bxdc2	98	75.219	Amphiprion_ocellaris
ENSSSCG00000016827	BRIX1	95	74.052	ENSAPEG00000017124	bxdc2	98	74.927	Amphiprion_percula
ENSSSCG00000016827	BRIX1	97	71.839	ENSATEG00000016635	bxdc2	99	71.839	Anabas_testudineus
ENSSSCG00000016827	BRIX1	81	74.658	ENSAPLG00000006647	BRIX1	98	74.658	Anas_platyrhynchos
ENSSSCG00000016827	BRIX1	97	73.654	ENSACAG00000008586	BRIX1	99	73.088	Anolis_carolinensis
ENSSSCG00000016827	BRIX1	99	85.836	ENSANAG00000010505	-	100	85.552	Aotus_nancymaae
ENSSSCG00000016827	BRIX1	99	90.909	ENSANAG00000022329	-	100	90.909	Aotus_nancymaae
ENSSSCG00000016827	BRIX1	86	76.948	ENSACLG00000005213	bxdc2	86	78.644	Astatotilapia_calliptera
ENSSSCG00000016827	BRIX1	87	72.436	ENSAMXG00000043121	bxdc2	99	68.391	Astyanax_mexicanus
ENSSSCG00000016827	BRIX1	99	95.467	ENSBTAG00000019211	BRIX1	100	95.467	Bos_taurus
ENSSSCG00000016827	BRIX1	75	49.259	WBGene00019678	K12H4.3	71	50.794	Caenorhabditis_elegans
ENSSSCG00000016827	BRIX1	99	91.501	ENSCJAG00000007390	-	100	91.501	Callithrix_jacchus
ENSSSCG00000016827	BRIX1	99	93.484	ENSCJAG00000018506	-	100	93.484	Callithrix_jacchus
ENSSSCG00000016827	BRIX1	99	89.518	ENSCAFG00000018797	BRIX1	100	89.518	Canis_familiaris
ENSSSCG00000016827	BRIX1	99	83.286	ENSCAFG00020016783	BRIX1	100	83.286	Canis_lupus_dingo
ENSSSCG00000016827	BRIX1	99	91.501	ENSCHIG00000015024	BRIX1	100	91.501	Capra_hircus
ENSSSCG00000016827	BRIX1	99	91.218	ENSTSYG00000002898	BRIX1	100	90.652	Carlito_syrichta
ENSSSCG00000016827	BRIX1	84	78.000	ENSCAPG00000009776	BRIX1	100	78.000	Cavia_aperea
ENSSSCG00000016827	BRIX1	93	91.566	ENSCPOG00000022064	BRIX1	100	89.235	Cavia_porcellus
ENSSSCG00000016827	BRIX1	99	94.051	ENSCCAG00000033405	BRIX1	100	94.051	Cebus_capucinus
ENSSSCG00000016827	BRIX1	98	94.286	ENSCATG00000037721	BRIX1	99	94.286	Cercocebus_atys
ENSSSCG00000016827	BRIX1	98	92.023	ENSCLAG00000008124	BRIX1	99	92.023	Chinchilla_lanigera
ENSSSCG00000016827	BRIX1	99	93.768	ENSCSAG00000017117	BRIX1	100	93.768	Chlorocebus_sabaeus
ENSSSCG00000016827	BRIX1	99	91.785	ENSCHOG00000001790	-	100	91.785	Choloepus_hoffmanni
ENSSSCG00000016827	BRIX1	97	75.358	ENSCHOG00000012227	-	100	75.072	Choloepus_hoffmanni
ENSSSCG00000016827	BRIX1	97	75.862	ENSCPBG00000021309	BRIX1	98	76.437	Chrysemys_picta_bellii
ENSSSCG00000016827	BRIX1	72	56.371	ENSCING00000001695	-	97	56.371	Ciona_intestinalis
ENSSSCG00000016827	BRIX1	85	52.614	ENSCSAVG00000008644	-	97	52.614	Ciona_savignyi
ENSSSCG00000016827	BRIX1	98	94.571	ENSCANG00000022969	BRIX1	98	94.571	Colobus_angolensis_palliatus
ENSSSCG00000016827	BRIX1	99	90.368	ENSCGRG00001007932	Brix1	100	90.368	Cricetulus_griseus_chok1gshd
ENSSSCG00000016827	BRIX1	99	90.368	ENSCGRG00000016743	Brix1	100	90.368	Cricetulus_griseus_crigri
ENSSSCG00000016827	BRIX1	95	71.884	ENSCSEG00000019821	bxdc2	99	70.435	Cynoglossus_semilaevis
ENSSSCG00000016827	BRIX1	95	71.720	ENSCVAG00000016942	bxdc2	98	71.720	Cyprinodon_variegatus
ENSSSCG00000016827	BRIX1	81	72.069	ENSDARG00000098935	bxdc2	78	70.530	Danio_rerio
ENSSSCG00000016827	BRIX1	99	92.351	ENSDNOG00000002878	BRIX1	100	92.351	Dasypus_novemcinctus
ENSSSCG00000016827	BRIX1	99	90.368	ENSDORG00000009369	Brix1	100	90.368	Dipodomys_ordii
ENSSSCG00000016827	BRIX1	63	62.996	FBgn0035524	CG11583	64	62.996	Drosophila_melanogaster
ENSSSCG00000016827	BRIX1	99	82.436	ENSETEG00000017329	-	100	82.436	Echinops_telfairi
ENSSSCG00000016827	BRIX1	96	84.348	ENSETEG00000017842	-	99	84.348	Echinops_telfairi
ENSSSCG00000016827	BRIX1	71	73.228	ENSEBUG00000007717	BRIX1	81	71.923	Eptatretus_burgeri
ENSSSCG00000016827	BRIX1	99	94.334	ENSEASG00005014968	BRIX1	100	94.334	Equus_asinus_asinus
ENSSSCG00000016827	BRIX1	99	94.648	ENSECAG00000000377	BRIX1	92	94.648	Equus_caballus
ENSSSCG00000016827	BRIX1	99	83.003	ENSEEUG00000008350	BRIX1	100	83.003	Erinaceus_europaeus
ENSSSCG00000016827	BRIX1	97	72.414	ENSELUG00000009050	bxdc2	95	72.126	Esox_lucius
ENSSSCG00000016827	BRIX1	99	94.051	ENSFCAG00000042465	BRIX1	100	94.051	Felis_catus
ENSSSCG00000016827	BRIX1	95	75.072	ENSFALG00000002106	BRIX1	100	72.329	Ficedula_albicollis
ENSSSCG00000016827	BRIX1	99	91.785	ENSFDAG00000018960	BRIX1	100	91.785	Fukomys_damarensis
ENSSSCG00000016827	BRIX1	95	72.303	ENSFHEG00000004488	bxdc2	98	72.141	Fundulus_heteroclitus
ENSSSCG00000016827	BRIX1	75	79.630	ENSGMOG00000002425	bxdc2	94	79.630	Gadus_morhua
ENSSSCG00000016827	BRIX1	93	77.246	ENSGALG00000003373	BRIX1	99	75.793	Gallus_gallus
ENSSSCG00000016827	BRIX1	90	72.561	ENSGAFG00000011947	bxdc2	98	71.014	Gambusia_affinis
ENSSSCG00000016827	BRIX1	91	70.948	ENSGACG00000016491	bxdc2	100	68.876	Gasterosteus_aculeatus
ENSSSCG00000016827	BRIX1	91	79.321	ENSGAGG00000011959	BRIX1	99	77.299	Gopherus_agassizii
ENSSSCG00000016827	BRIX1	99	94.618	ENSGGOG00000004225	BRIX1	100	94.618	Gorilla_gorilla
ENSSSCG00000016827	BRIX1	86	77.273	ENSHBUG00000017923	bxdc2	86	78.983	Haplochromis_burtoni
ENSSSCG00000016827	BRIX1	99	69.972	ENSHGLG00000010349	-	100	69.972	Heterocephalus_glaber_female
ENSSSCG00000016827	BRIX1	95	74.118	ENSHGLG00000017782	-	99	74.118	Heterocephalus_glaber_female
ENSSSCG00000016827	BRIX1	99	73.088	ENSHGLG00000000296	-	100	73.088	Heterocephalus_glaber_female
ENSSSCG00000016827	BRIX1	99	91.218	ENSHGLG00000004566	BRIX1	100	91.218	Heterocephalus_glaber_female
ENSSSCG00000016827	BRIX1	99	71.955	ENSHGLG00000002055	-	100	71.955	Heterocephalus_glaber_female
ENSSSCG00000016827	BRIX1	92	76.829	ENSHGLG00100000909	-	81	75.581	Heterocephalus_glaber_male
ENSSSCG00000016827	BRIX1	99	91.501	ENSHGLG00100002204	-	100	91.501	Heterocephalus_glaber_male
ENSSSCG00000016827	BRIX1	99	70.538	ENSHGLG00100001527	-	100	70.538	Heterocephalus_glaber_male
ENSSSCG00000016827	BRIX1	98	82.386	ENSHGLG00100000068	-	97	82.386	Heterocephalus_glaber_male
ENSSSCG00000016827	BRIX1	95	70.760	ENSHCOG00000011674	bxdc2	98	70.468	Hippocampus_comes
ENSSSCG00000016827	BRIX1	93	69.970	ENSIPUG00000015099	brix1	95	69.670	Ictalurus_punctatus
ENSSSCG00000016827	BRIX1	99	92.068	ENSSTOG00000009600	BRIX1	100	92.068	Ictidomys_tridecemlineatus
ENSSSCG00000016827	BRIX1	99	83.853	ENSJJAG00000004662	-	100	83.853	Jaculus_jaculus
ENSSSCG00000016827	BRIX1	73	93.156	ENSJJAG00000001806	-	100	93.156	Jaculus_jaculus
ENSSSCG00000016827	BRIX1	94	80.531	ENSJJAG00000009708	-	97	80.531	Jaculus_jaculus
ENSSSCG00000016827	BRIX1	99	85.836	ENSJJAG00000001423	-	100	85.836	Jaculus_jaculus
ENSSSCG00000016827	BRIX1	95	72.886	ENSKMAG00000014487	bxdc2	98	71.429	Kryptolebias_marmoratus
ENSSSCG00000016827	BRIX1	95	67.930	ENSLBEG00000018123	bxdc2	99	68.513	Labrus_bergylta
ENSSSCG00000016827	BRIX1	97	73.699	ENSLACG00000005971	BRIX1	99	73.699	Latimeria_chalumnae
ENSSSCG00000016827	BRIX1	96	70.201	ENSLOCG00000011774	bxdc2	99	71.143	Lepisosteus_oculatus
ENSSSCG00000016827	BRIX1	99	92.635	ENSLAFG00000007249	BRIX1	100	92.635	Loxodonta_africana
ENSSSCG00000016827	BRIX1	99	94.051	ENSMFAG00000033107	BRIX1	100	94.051	Macaca_fascicularis
ENSSSCG00000016827	BRIX1	99	94.051	ENSMMUG00000038794	BRIX1	100	94.051	Macaca_mulatta
ENSSSCG00000016827	BRIX1	99	93.484	ENSMNEG00000039324	BRIX1	100	93.484	Macaca_nemestrina
ENSSSCG00000016827	BRIX1	99	94.051	ENSMLEG00000041564	BRIX1	100	94.051	Mandrillus_leucophaeus
ENSSSCG00000016827	BRIX1	84	79.667	ENSMAMG00000015004	bxdc2	99	72.934	Mastacembelus_armatus
ENSSSCG00000016827	BRIX1	86	77.273	ENSMZEG00005019808	bxdc2	86	78.983	Maylandia_zebra
ENSSSCG00000016827	BRIX1	53	78.836	ENSMGAG00000003156	BRIX1	98	76.238	Meleagris_gallopavo
ENSSSCG00000016827	BRIX1	84	95.333	ENSMAUG00000014172	Brix1	100	95.333	Mesocricetus_auratus
ENSSSCG00000016827	BRIX1	99	92.351	ENSMICG00000005672	BRIX1	100	92.351	Microcebus_murinus
ENSSSCG00000016827	BRIX1	99	90.652	ENSMOCG00000018798	Brix1	100	90.652	Microtus_ochrogaster
ENSSSCG00000016827	BRIX1	95	73.178	ENSMMOG00000000861	bxdc2	99	74.344	Mola_mola
ENSSSCG00000016827	BRIX1	97	82.421	ENSMODG00000020386	BRIX1	98	81.844	Monodelphis_domestica
ENSSSCG00000016827	BRIX1	95	66.276	ENSMALG00000020437	bxdc2	98	65.607	Monopterus_albus
ENSSSCG00000016827	BRIX1	99	92.068	MGP_CAROLIEiJ_G0019665	Brix1	100	92.068	Mus_caroli
ENSSSCG00000016827	BRIX1	99	92.918	ENSMUSG00000022247	Brix1	100	92.918	Mus_musculus
ENSSSCG00000016827	BRIX1	99	92.918	MGP_SPRETEiJ_G0020562	Brix1	100	92.918	Mus_spretus
ENSSSCG00000016827	BRIX1	99	93.484	ENSMPUG00000015137	BRIX1	100	93.484	Mustela_putorius_furo
ENSSSCG00000016827	BRIX1	74	95.076	ENSMLUG00000029255	BRIX1	100	95.076	Myotis_lucifugus
ENSSSCG00000016827	BRIX1	97	91.329	ENSNGAG00000002585	-	100	91.329	Nannospalax_galili
ENSSSCG00000016827	BRIX1	99	91.785	ENSNGAG00000021812	-	100	91.785	Nannospalax_galili
ENSSSCG00000016827	BRIX1	86	76.623	ENSNBRG00000008850	bxdc2	81	78.305	Neolamprologus_brichardi
ENSSSCG00000016827	BRIX1	99	89.518	ENSNLEG00000032149	BRIX1	100	89.518	Nomascus_leucogenys
ENSSSCG00000016827	BRIX1	97	67.723	ENSMEUG00000016482	BRIX1	98	68.300	Notamacropus_eugenii
ENSSSCG00000016827	BRIX1	56	95.522	ENSOPRG00000012886	BRIX1	100	95.522	Ochotona_princeps
ENSSSCG00000016827	BRIX1	99	63.173	ENSODEG00000002389	-	100	63.739	Octodon_degus
ENSSSCG00000016827	BRIX1	99	75.493	ENSODEG00000010997	-	100	76.056	Octodon_degus
ENSSSCG00000016827	BRIX1	82	91.781	ENSODEG00000019171	-	100	91.781	Octodon_degus
ENSSSCG00000016827	BRIX1	86	77.597	ENSONIG00000007725	bxdc2	84	78.983	Oreochromis_niloticus
ENSSSCG00000016827	BRIX1	82	84.983	ENSOANG00000014525	-	98	84.983	Ornithorhynchus_anatinus
ENSSSCG00000016827	BRIX1	99	91.501	ENSOCUG00000014478	BRIX1	100	91.501	Oryctolagus_cuniculus
ENSSSCG00000016827	BRIX1	97	70.690	ENSORLG00000005895	bxdc2	88	77.152	Oryzias_latipes
ENSSSCG00000016827	BRIX1	97	70.690	ENSORLG00020005201	bxdc2	88	77.152	Oryzias_latipes_hni
ENSSSCG00000016827	BRIX1	97	70.402	ENSORLG00015011685	bxdc2	88	76.821	Oryzias_latipes_hsok
ENSSSCG00000016827	BRIX1	97	70.402	ENSOMEG00000007680	bxdc2	99	70.000	Oryzias_melastigma
ENSSSCG00000016827	BRIX1	99	90.935	ENSOGAG00000014827	BRIX1	100	90.935	Otolemur_garnettii
ENSSSCG00000016827	BRIX1	99	95.467	ENSOARG00000011539	BRIX1	100	95.467	Ovis_aries
ENSSSCG00000016827	BRIX1	99	94.051	ENSPPAG00000038183	BRIX1	100	94.051	Pan_paniscus
ENSSSCG00000016827	BRIX1	99	93.768	ENSPPRG00000023961	BRIX1	100	93.768	Panthera_pardus
ENSSSCG00000016827	BRIX1	99	94.051	ENSPTIG00000006466	BRIX1	100	94.051	Panthera_tigris_altaica
ENSSSCG00000016827	BRIX1	99	94.334	ENSPTRG00000016784	BRIX1	100	94.334	Pan_troglodytes
ENSSSCG00000016827	BRIX1	98	94.000	ENSPANG00000016504	BRIX1	98	94.000	Papio_anubis
ENSSSCG00000016827	BRIX1	89	75.232	ENSPKIG00000005920	bxdc2	85	71.920	Paramormyrops_kingsleyae
ENSSSCG00000016827	BRIX1	76	81.550	ENSPSIG00000011219	BRIX1	99	81.550	Pelodiscus_sinensis
ENSSSCG00000016827	BRIX1	95	64.516	ENSPMGG00000022988	bxdc2	98	64.516	Periophthalmus_magnuspinnatus
ENSSSCG00000016827	BRIX1	99	91.785	ENSPEMG00000016920	Brix1	100	91.785	Peromyscus_maniculatus_bairdii
ENSSSCG00000016827	BRIX1	97	81.556	ENSPCIG00000022778	BRIX1	98	82.421	Phascolarctos_cinereus
ENSSSCG00000016827	BRIX1	96	70.402	ENSPFOG00000008577	bxdc2	81	70.317	Poecilia_formosa
ENSSSCG00000016827	BRIX1	96	70.725	ENSPLAG00000006772	bxdc2	91	69.914	Poecilia_latipinna
ENSSSCG00000016827	BRIX1	96	70.402	ENSPMEG00000020229	bxdc2	91	69.914	Poecilia_mexicana
ENSSSCG00000016827	BRIX1	96	70.000	ENSPREG00000017461	bxdc2	91	70.201	Poecilia_reticulata
ENSSSCG00000016827	BRIX1	99	90.368	ENSPPYG00000015390	BRIX1	100	90.368	Pongo_abelii
ENSSSCG00000016827	BRIX1	52	88.235	ENSPCAG00000005158	-	100	88.235	Procavia_capensis
ENSSSCG00000016827	BRIX1	92	70.213	ENSPCOG00000016748	-	94	70.213	Propithecus_coquereli
ENSSSCG00000016827	BRIX1	99	92.351	ENSPCOG00000018281	-	100	92.351	Propithecus_coquereli
ENSSSCG00000016827	BRIX1	84	93.333	ENSPVAG00000016925	BRIX1	100	93.333	Pteropus_vampyrus
ENSSSCG00000016827	BRIX1	86	77.273	ENSPNYG00000007707	bxdc2	86	78.983	Pundamilia_nyererei
ENSSSCG00000016827	BRIX1	91	71.560	ENSPNAG00000010431	bxdc2	96	69.527	Pygocentrus_nattereri
ENSSSCG00000016827	BRIX1	99	91.501	ENSRNOG00000018021	Brix1	100	91.218	Rattus_norvegicus
ENSSSCG00000016827	BRIX1	98	94.571	ENSRBIG00000042083	BRIX1	98	94.571	Rhinopithecus_bieti
ENSSSCG00000016827	BRIX1	98	94.857	ENSRROG00000031228	BRIX1	98	94.857	Rhinopithecus_roxellana
ENSSSCG00000016827	BRIX1	70	48.289	YOL077C	-	90	48.289	Saccharomyces_cerevisiae
ENSSSCG00000016827	BRIX1	99	93.768	ENSSBOG00000033290	-	100	93.768	Saimiri_boliviensis_boliviensis
ENSSSCG00000016827	BRIX1	99	92.635	ENSSBOG00000017845	-	100	92.635	Saimiri_boliviensis_boliviensis
ENSSSCG00000016827	BRIX1	97	82.133	ENSSHAG00000010794	BRIX1	98	82.133	Sarcophilus_harrisii
ENSSSCG00000016827	BRIX1	90	71.692	ENSSFOG00015022435	brix1	99	69.429	Scleropages_formosus
ENSSSCG00000016827	BRIX1	96	70.640	ENSSMAG00000005909	bxdc2	99	69.942	Scophthalmus_maximus
ENSSSCG00000016827	BRIX1	95	74.344	ENSSDUG00000016234	bxdc2	98	74.927	Seriola_dumerili
ENSSSCG00000016827	BRIX1	95	74.052	ENSSLDG00000007044	bxdc2	98	74.636	Seriola_lalandi_dorsalis
ENSSSCG00000016827	BRIX1	99	88.579	ENSSARG00000009879	BRIX1	100	88.858	Sorex_araneus
ENSSSCG00000016827	BRIX1	84	81.000	ENSSPUG00000019166	-	100	81.000	Sphenodon_punctatus
ENSSSCG00000016827	BRIX1	98	72.159	ENSSPUG00000000011	-	100	70.308	Sphenodon_punctatus
ENSSSCG00000016827	BRIX1	95	73.469	ENSSPAG00000006309	bxdc2	98	74.052	Stegastes_partitus
ENSSSCG00000016827	BRIX1	93	76.048	ENSTGUG00000001961	BRIX1	99	74.640	Taeniopygia_guttata
ENSSSCG00000016827	BRIX1	95	72.012	ENSTRUG00000011403	bxdc2	86	78.983	Takifugu_rubripes
ENSSSCG00000016827	BRIX1	91	73.538	ENSTNIG00000007517	bxdc2	99	70.739	Tetraodon_nigroviridis
ENSSSCG00000016827	BRIX1	84	90.333	ENSTBEG00000011652	BRIX1	100	90.333	Tupaia_belangeri
ENSSSCG00000016827	BRIX1	99	94.901	ENSTTRG00000003262	BRIX1	100	94.901	Tursiops_truncatus
ENSSSCG00000016827	BRIX1	99	80.337	ENSUAMG00000022481	BRIX1	100	80.508	Ursus_americanus
ENSSSCG00000016827	BRIX1	99	94.051	ENSUMAG00000012900	BRIX1	100	94.051	Ursus_maritimus
ENSSSCG00000016827	BRIX1	62	95.928	ENSVPAG00000010128	BRIX1	63	95.928	Vicugna_pacos
ENSSSCG00000016827	BRIX1	99	85.269	ENSVVUG00000022099	BRIX1	100	85.269	Vulpes_vulpes
ENSSSCG00000016827	BRIX1	97	75.216	ENSXETG00000000703	brix1	100	74.352	Xenopus_tropicalis
ENSSSCG00000016827	BRIX1	95	72.303	ENSXCOG00000002461	bxdc2	98	71.554	Xiphophorus_couchianus
ENSSSCG00000016827	BRIX1	96	70.655	ENSXMAG00000004284	bxdc2	86	70.487	Xiphophorus_maculatus