EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000016911 (Gene tree)
Gene ID: 100518521
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 127870 bases
Position: chr16:34478227-34606096
Accession: 100518521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017920	rRNA_proc-arch	PF13234.6	6.1e-87	1	1
ENSSSCP00000017920	DEAD	PF00270.29	7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000018417	MTREX-201	5317	XM_003133964	ENSSSCP00000017920	1042 (aa)	XP_003134012	F1SLL6

Gene Model

Click here to download ENSSSCG00000016911's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000016911	MTREX	89	36.529	ENSSSCG00000001424	SKIV2L	80	36.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016911	MTREX	100	98.656	ENSG00000039123	MTREX	100	98.656	Homo_sapiens
ENSSSCG00000016911	MTREX	100	83.333	ENSAPOG00000007814	mtrex	100	83.206	Acanthochromis_polyacanthus
ENSSSCG00000016911	MTREX	100	99.041	ENSAMEG00000013856	MTREX	100	99.041	Ailuropoda_melanoleuca
ENSSSCG00000016911	MTREX	91	87.983	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSSSCG00000016911	MTREX	100	83.238	ENSAOCG00000011884	mtrex	100	83.238	Amphiprion_ocellaris
ENSSSCG00000016911	MTREX	100	83.238	ENSAPEG00000019384	mtrex	100	83.143	Amphiprion_percula
ENSSSCG00000016911	MTREX	100	83.985	ENSATEG00000015117	mtrex	100	83.889	Anabas_testudineus
ENSSSCG00000016911	MTREX	94	93.388	ENSAPLG00000009694	MTREX	99	93.388	Anas_platyrhynchos
ENSSSCG00000016911	MTREX	100	90.979	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSSSCG00000016911	MTREX	100	98.752	ENSANAG00000023095	MTREX	100	98.752	Aotus_nancymaae
ENSSSCG00000016911	MTREX	100	82.683	ENSACLG00000001921	mtrex	100	82.778	Astatotilapia_calliptera
ENSSSCG00000016911	MTREX	97	82.122	ENSAMXG00000018751	mtrex	99	84.036	Astyanax_mexicanus
ENSSSCG00000016911	MTREX	100	98.944	ENSBTAG00000010518	MTREX	100	98.944	Bos_taurus
ENSSSCG00000016911	MTREX	91	53.628	WBGene00012342	mtr-4	94	53.299	Caenorhabditis_elegans
ENSSSCG00000016911	MTREX	100	97.710	ENSCJAG00000001773	MTREX	100	97.710	Callithrix_jacchus
ENSSSCG00000016911	MTREX	100	99.136	ENSCAFG00000006818	MTREX	100	99.136	Canis_familiaris
ENSSSCG00000016911	MTREX	100	99.136	ENSCAFG00020024352	MTREX	100	99.136	Canis_lupus_dingo
ENSSSCG00000016911	MTREX	100	99.040	ENSCHIG00000024413	MTREX	100	99.040	Capra_hircus
ENSSSCG00000016911	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSSSCG00000016911	MTREX	96	73.447	ENSCAPG00000008696	MTREX	100	73.447	Cavia_aperea
ENSSSCG00000016911	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSSSCG00000016911	MTREX	100	98.752	ENSCCAG00000014177	MTREX	100	98.752	Cebus_capucinus
ENSSSCG00000016911	MTREX	100	98.464	ENSCATG00000042153	MTREX	100	98.464	Cercocebus_atys
ENSSSCG00000016911	MTREX	100	97.985	ENSCLAG00000006622	MTREX	100	97.985	Chinchilla_lanigera
ENSSSCG00000016911	MTREX	100	93.971	ENSCSAG00000016445	MTREX	100	93.971	Chlorocebus_sabaeus
ENSSSCG00000016911	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSSSCG00000016911	MTREX	100	92.426	ENSCPBG00000026551	MTREX	94	92.426	Chrysemys_picta_bellii
ENSSSCG00000016911	MTREX	99	66.444	ENSCING00000003239	-	99	66.348	Ciona_intestinalis
ENSSSCG00000016911	MTREX	99	65.491	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSSSCG00000016911	MTREX	100	98.369	ENSCANG00000035770	MTREX	100	98.369	Colobus_angolensis_palliatus
ENSSSCG00000016911	MTREX	100	97.505	ENSCGRG00001024680	Mtrex	100	97.505	Cricetulus_griseus_chok1gshd
ENSSSCG00000016911	MTREX	100	97.505	ENSCGRG00000000307	Mtrex	100	97.505	Cricetulus_griseus_crigri
ENSSSCG00000016911	MTREX	100	82.044	ENSCSEG00000018621	mtrex	98	82.044	Cynoglossus_semilaevis
ENSSSCG00000016911	MTREX	100	83.555	ENSCVAG00000004556	mtrex	100	83.524	Cyprinodon_variegatus
ENSSSCG00000016911	MTREX	100	85.129	ENSDARG00000013457	mtrex	100	84.938	Danio_rerio
ENSSSCG00000016911	MTREX	100	96.941	ENSDNOG00000015375	MTREX	100	96.941	Dasypus_novemcinctus
ENSSSCG00000016911	MTREX	100	97.985	ENSDORG00000006782	Mtrex	100	97.985	Dipodomys_ordii
ENSSSCG00000016911	MTREX	99	62.453	FBgn0001986	Mtr4	93	65.261	Drosophila_melanogaster
ENSSSCG00000016911	MTREX	90	80.468	ENSETEG00000000727	MTREX	90	80.468	Echinops_telfairi
ENSSSCG00000016911	MTREX	99	74.591	ENSEBUG00000012869	mtrex	99	74.591	Eptatretus_burgeri
ENSSSCG00000016911	MTREX	100	98.752	ENSEASG00005013270	MTREX	100	98.752	Equus_asinus_asinus
ENSSSCG00000016911	MTREX	100	98.848	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSSSCG00000016911	MTREX	98	88.878	ENSEEUG00000000527	MTREX	100	88.878	Erinaceus_europaeus
ENSSSCG00000016911	MTREX	98	84.966	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSSSCG00000016911	MTREX	100	98.944	ENSFCAG00000010575	MTREX	100	98.944	Felis_catus
ENSSSCG00000016911	MTREX	100	90.019	ENSFALG00000010850	MTREX	100	89.923	Ficedula_albicollis
ENSSSCG00000016911	MTREX	100	97.601	ENSFDAG00000011199	MTREX	100	97.601	Fukomys_damarensis
ENSSSCG00000016911	MTREX	100	83.603	ENSFHEG00000023014	mtrex	100	82.634	Fundulus_heteroclitus
ENSSSCG00000016911	MTREX	100	79.962	ENSGMOG00000014702	mtrex	100	80.057	Gadus_morhua
ENSSSCG00000016911	MTREX	100	91.171	ENSGALG00000014709	MTREX	86	91.100	Gallus_gallus
ENSSSCG00000016911	MTREX	100	83.794	ENSGAFG00000012425	mtrex	98	87.500	Gambusia_affinis
ENSSSCG00000016911	MTREX	100	79.258	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSSSCG00000016911	MTREX	100	92.138	ENSGAGG00000020036	MTREX	100	91.755	Gopherus_agassizii
ENSSSCG00000016911	MTREX	100	98.752	ENSGGOG00000001867	MTREX	100	98.752	Gorilla_gorilla
ENSSSCG00000016911	MTREX	100	82.683	ENSHBUG00000006229	mtrex	100	82.778	Haplochromis_burtoni
ENSSSCG00000016911	MTREX	100	97.889	ENSHGLG00000019445	SKIV2L2	100	97.889	Heterocephalus_glaber_female
ENSSSCG00000016911	MTREX	100	97.889	ENSHGLG00100011833	SKIV2L2	100	97.889	Heterocephalus_glaber_male
ENSSSCG00000016911	MTREX	91	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSSSCG00000016911	MTREX	100	85.578	ENSIPUG00000024348	skiv2l2	100	85.468	Ictalurus_punctatus
ENSSSCG00000016911	MTREX	100	98.369	ENSSTOG00000010802	MTREX	100	98.369	Ictidomys_tridecemlineatus
ENSSSCG00000016911	MTREX	100	91.363	ENSJJAG00000020975	Mtrex	100	91.363	Jaculus_jaculus
ENSSSCG00000016911	MTREX	100	82.841	ENSKMAG00000012642	mtrex	100	82.650	Kryptolebias_marmoratus
ENSSSCG00000016911	MTREX	100	83.238	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSSSCG00000016911	MTREX	100	88.793	ENSLACG00000009075	MTREX	100	88.443	Latimeria_chalumnae
ENSSSCG00000016911	MTREX	100	87.261	ENSLOCG00000010186	mtrex	100	86.877	Lepisosteus_oculatus
ENSSSCG00000016911	MTREX	99	96.257	ENSLAFG00000010497	MTREX	100	96.257	Loxodonta_africana
ENSSSCG00000016911	MTREX	100	98.464	ENSMFAG00000031610	MTREX	100	98.464	Macaca_fascicularis
ENSSSCG00000016911	MTREX	100	97.222	ENSMMUG00000010379	MTREX	100	97.222	Macaca_mulatta
ENSSSCG00000016911	MTREX	100	98.464	ENSMNEG00000032746	MTREX	100	98.464	Macaca_nemestrina
ENSSSCG00000016911	MTREX	100	98.464	ENSMLEG00000041051	MTREX	100	98.464	Mandrillus_leucophaeus
ENSSSCG00000016911	MTREX	95	86.172	ENSMAMG00000016753	mtrex	96	88.518	Mastacembelus_armatus
ENSSSCG00000016911	MTREX	100	82.683	ENSMZEG00005000414	mtrex	100	82.778	Maylandia_zebra
ENSSSCG00000016911	MTREX	94	67.543	ENSMGAG00000003980	MTREX	100	67.543	Meleagris_gallopavo
ENSSSCG00000016911	MTREX	100	97.409	ENSMAUG00000010727	Mtrex	100	97.409	Mesocricetus_auratus
ENSSSCG00000016911	MTREX	100	99.040	ENSMICG00000012779	MTREX	100	99.040	Microcebus_murinus
ENSSSCG00000016911	MTREX	100	97.409	ENSMOCG00000019886	Mtrex	100	97.409	Microtus_ochrogaster
ENSSSCG00000016911	MTREX	91	87.591	ENSMMOG00000002476	mtrex	96	87.591	Mola_mola
ENSSSCG00000016911	MTREX	100	93.186	ENSMODG00000019494	MTREX	100	92.919	Monodelphis_domestica
ENSSSCG00000016911	MTREX	92	82.702	ENSMALG00000002917	mtrex	99	82.702	Monopterus_albus
ENSSSCG00000016911	MTREX	100	96.929	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	Mus_caroli
ENSSSCG00000016911	MTREX	100	97.121	ENSMUSG00000016018	Mtrex	100	97.121	Mus_musculus
ENSSSCG00000016911	MTREX	100	97.025	MGP_PahariEiJ_G0015967	Mtrex	100	97.025	Mus_pahari
ENSSSCG00000016911	MTREX	100	97.121	MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	Mus_spretus
ENSSSCG00000016911	MTREX	100	99.328	ENSMPUG00000007619	MTREX	100	99.328	Mustela_putorius_furo
ENSSSCG00000016911	MTREX	100	97.129	ENSMLUG00000001152	MTREX	100	97.129	Myotis_lucifugus
ENSSSCG00000016911	MTREX	100	98.081	ENSNGAG00000011938	Mtrex	100	98.081	Nannospalax_galili
ENSSSCG00000016911	MTREX	100	82.778	ENSNBRG00000011293	mtrex	100	82.873	Neolamprologus_brichardi
ENSSSCG00000016911	MTREX	100	94.732	ENSNLEG00000001494	MTREX	100	94.732	Nomascus_leucogenys
ENSSSCG00000016911	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSSSCG00000016911	MTREX	100	82.150	ENSOPRG00000008009	MTREX	100	82.726	Ochotona_princeps
ENSSSCG00000016911	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSSSCG00000016911	MTREX	100	82.588	ENSONIG00000007587	mtrex	100	82.683	Oreochromis_niloticus
ENSSSCG00000016911	MTREX	100	98.560	ENSOCUG00000004463	MTREX	100	98.560	Oryctolagus_cuniculus
ENSSSCG00000016911	MTREX	100	82.890	ENSORLG00000005443	mtrex	100	82.700	Oryzias_latipes
ENSSSCG00000016911	MTREX	100	82.795	ENSORLG00020006329	mtrex	100	82.605	Oryzias_latipes_hni
ENSSSCG00000016911	MTREX	100	82.795	ENSORLG00015012924	mtrex	100	82.605	Oryzias_latipes_hsok
ENSSSCG00000016911	MTREX	100	82.224	ENSOMEG00000008825	mtrex	100	82.000	Oryzias_melastigma
ENSSSCG00000016911	MTREX	100	98.656	ENSOGAG00000002886	MTREX	100	98.656	Otolemur_garnettii
ENSSSCG00000016911	MTREX	100	98.756	ENSOARG00000007764	MTREX	100	98.756	Ovis_aries
ENSSSCG00000016911	MTREX	100	98.848	ENSPPAG00000039291	MTREX	100	98.848	Pan_paniscus
ENSSSCG00000016911	MTREX	100	98.944	ENSPPRG00000019701	MTREX	100	98.944	Panthera_pardus
ENSSSCG00000016911	MTREX	100	97.409	ENSPTIG00000009313	MTREX	100	97.409	Panthera_tigris_altaica
ENSSSCG00000016911	MTREX	100	98.848	ENSPTRG00000016878	MTREX	100	98.848	Pan_troglodytes
ENSSSCG00000016911	MTREX	100	98.369	ENSPANG00000009697	MTREX	100	98.369	Papio_anubis
ENSSSCG00000016911	MTREX	100	86.819	ENSPKIG00000020833	mtrex	99	87.894	Paramormyrops_kingsleyae
ENSSSCG00000016911	MTREX	100	92.234	ENSPSIG00000012150	MTREX	100	92.234	Pelodiscus_sinensis
ENSSSCG00000016911	MTREX	100	81.030	ENSPMGG00000002582	mtrex	100	81.030	Periophthalmus_magnuspinnatus
ENSSSCG00000016911	MTREX	95	65.694	ENSPMAG00000009668	mtrex	100	65.562	Petromyzon_marinus
ENSSSCG00000016911	MTREX	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSSSCG00000016911	MTREX	75	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSSSCG00000016911	MTREX	100	83.603	ENSPLAG00000021311	mtrex	100	83.508	Poecilia_latipinna
ENSSSCG00000016911	MTREX	91	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSSSCG00000016911	MTREX	100	83.317	ENSPREG00000003089	mtrex	100	83.222	Poecilia_reticulata
ENSSSCG00000016911	MTREX	98	98.732	ENSPPYG00000015469	MTREX	98	98.732	Pongo_abelii
ENSSSCG00000016911	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSSSCG00000016911	MTREX	99	92.744	ENSPCOG00000018092	MTREX	100	92.639	Propithecus_coquereli
ENSSSCG00000016911	MTREX	100	99.232	ENSPVAG00000002445	MTREX	100	99.232	Pteropus_vampyrus
ENSSSCG00000016911	MTREX	100	82.588	ENSPNYG00000006164	mtrex	100	82.683	Pundamilia_nyererei
ENSSSCG00000016911	MTREX	100	86.342	ENSPNAG00000008794	mtrex	100	86.437	Pygocentrus_nattereri
ENSSSCG00000016911	MTREX	99	96.987	ENSRNOG00000010125	Mtrex	97	96.987	Rattus_norvegicus
ENSSSCG00000016911	MTREX	100	96.737	ENSRBIG00000034930	MTREX	100	96.737	Rhinopithecus_bieti
ENSSSCG00000016911	MTREX	100	98.464	ENSRROG00000039895	MTREX	100	98.464	Rhinopithecus_roxellana
ENSSSCG00000016911	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSSSCG00000016911	MTREX	100	98.560	ENSSBOG00000026693	MTREX	100	98.560	Saimiri_boliviensis_boliviensis
ENSSSCG00000016911	MTREX	96	95.186	ENSSHAG00000004600	MTREX	100	95.186	Sarcophilus_harrisii
ENSSSCG00000016911	MTREX	100	87.380	ENSSFOG00015014355	skiv2l2	100	87.285	Scleropages_formosus
ENSSSCG00000016911	MTREX	100	83.048	ENSSMAG00000007572	mtrex	100	82.841	Scophthalmus_maximus
ENSSSCG00000016911	MTREX	100	83.683	ENSSDUG00000023789	mtrex	100	83.683	Seriola_dumerili
ENSSSCG00000016911	MTREX	100	83.588	ENSSLDG00000006301	mtrex	100	83.492	Seriola_lalandi_dorsalis
ENSSSCG00000016911	MTREX	100	94.818	ENSSARG00000008387	MTREX	100	94.818	Sorex_araneus
ENSSSCG00000016911	MTREX	100	79.674	ENSSPUG00000007071	MTREX	100	79.770	Sphenodon_punctatus
ENSSSCG00000016911	MTREX	91	87.408	ENSSPAG00000011319	mtrex	94	87.933	Stegastes_partitus
ENSSSCG00000016911	MTREX	100	89.741	ENSTGUG00000002480	MTREX	100	89.741	Taeniopygia_guttata
ENSSSCG00000016911	MTREX	100	83.048	ENSTRUG00000014571	mtrex	100	82.952	Takifugu_rubripes
ENSSSCG00000016911	MTREX	100	82.246	ENSTBEG00000007769	MTREX	100	82.246	Tupaia_belangeri
ENSSSCG00000016911	MTREX	100	98.944	ENSTTRG00000008678	MTREX	100	98.944	Tursiops_truncatus
ENSSSCG00000016911	MTREX	100	99.040	ENSUAMG00000023061	MTREX	100	99.040	Ursus_americanus
ENSSSCG00000016911	MTREX	100	98.372	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSSSCG00000016911	MTREX	100	88.388	ENSVPAG00000011174	MTREX	100	88.388	Vicugna_pacos
ENSSSCG00000016911	MTREX	100	99.328	ENSVVUG00000021337	MTREX	100	99.328	Vulpes_vulpes
ENSSSCG00000016911	MTREX	100	88.686	ENSXETG00000032798	MTREX	100	88.686	Xenopus_tropicalis
ENSSSCG00000016911	MTREX	100	83.413	ENSXMAG00000004799	mtrex	100	83.477	Xiphophorus_maculatus