EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000016913 (Gene tree)
Gene ID: 431672
Gene Symbol: DDX4
Alias: VASA
Full Name: DEAD-box helicase 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 103127 bases
Position: chr16:34880568-34983694
Accession: 431672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000017922	DEAD	PF00270.29	6.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000018419	DDX4-201	2613	XM_021076577	ENSSSCP00000017922	729 (aa)	XP_020932236	F1SLL4

Gene Model

Click here to download ENSSSCG00000016913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000016913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000016913	DDX4	50	34.211	ENSSSCG00000025329	DDX49	76	34.211
ENSSSCG00000016913	DDX4	55	38.519	ENSSSCG00000032642	DDX41	64	38.519
ENSSSCG00000016913	DDX4	51	30.256	ENSSSCG00000015223	DDX25	98	30.311
ENSSSCG00000016913	DDX4	56	35.172	ENSSSCG00000000176	DDX23	52	35.172
ENSSSCG00000016913	DDX4	60	32.450	ENSSSCG00000022915	DDX27	61	32.450
ENSSSCG00000016913	DDX4	54	39.651	ENSSSCG00000000104	DDX17	77	38.788
ENSSSCG00000016913	DDX4	54	33.985	ENSSSCG00000021275	DDX52	66	33.985
ENSSSCG00000016913	DDX4	56	30.637	ENSSSCG00000017155	EIF4A3	94	30.637
ENSSSCG00000016913	DDX4	53	40.103	ENSSSCG00000004287	-	63	39.747
ENSSSCG00000016913	DDX4	61	52.980	ENSSSCG00000012252	DDX3X	71	51.380
ENSSSCG00000016913	DDX4	54	40.000	ENSSSCG00000012169	-	61	40.000
ENSSSCG00000016913	DDX4	55	39.753	ENSSSCG00000032092	DDX5	76	39.506
ENSSSCG00000016913	DDX4	51	37.234	ENSSSCG00000024444	DDX59	59	37.234
ENSSSCG00000016913	DDX4	59	33.333	ENSSSCG00000033149	DDX47	82	34.545
ENSSSCG00000016913	DDX4	55	30.536	ENSSSCG00000015712	DDX18	53	30.536
ENSSSCG00000016913	DDX4	78	46.127	ENSSSCG00000026430	DDX3Y	84	51.483
ENSSSCG00000016913	DDX4	60	36.739	ENSSSCG00000017289	DDX42	50	38.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000016913	DDX4	100	91.495	ENSG00000152670	DDX4	100	91.495	Homo_sapiens
ENSSSCG00000016913	DDX4	55	61.404	ENSAPOG00000021394	ddx4	100	61.404	Acanthochromis_polyacanthus
ENSSSCG00000016913	DDX4	100	96.433	ENSAMEG00000013960	DDX4	100	96.433	Ailuropoda_melanoleuca
ENSSSCG00000016913	DDX4	55	67.920	ENSACIG00000017623	ddx4	100	67.920	Amphilophus_citrinellus
ENSSSCG00000016913	DDX4	55	67.250	ENSAPEG00000008490	ddx4	100	67.250	Amphiprion_percula
ENSSSCG00000016913	DDX4	55	70.927	ENSATEG00000011704	ddx4	100	70.927	Anabas_testudineus
ENSSSCG00000016913	DDX4	60	81.507	ENSAPLG00000011662	DDX4	98	81.507	Anas_platyrhynchos
ENSSSCG00000016913	DDX4	100	64.354	ENSACAG00000014951	DDX4	100	63.351	Anolis_carolinensis
ENSSSCG00000016913	DDX4	100	90.535	ENSANAG00000029060	DDX4	100	90.535	Aotus_nancymaae
ENSSSCG00000016913	DDX4	67	67.556	ENSACLG00000007422	ddx4	93	56.394	Astatotilapia_calliptera
ENSSSCG00000016913	DDX4	67	71.020	ENSAMXG00000010288	ddx4	97	58.798	Astyanax_mexicanus
ENSSSCG00000016913	DDX4	100	95.885	ENSBTAG00000008871	DDX4	100	95.885	Bos_taurus
ENSSSCG00000016913	DDX4	64	42.857	WBGene00001598	glh-1	61	43.750	Caenorhabditis_elegans
ENSSSCG00000016913	DDX4	63	40.717	WBGene00001600	glh-3	66	40.717	Caenorhabditis_elegans
ENSSSCG00000016913	DDX4	100	89.575	ENSCJAG00000001951	DDX4	100	89.575	Callithrix_jacchus
ENSSSCG00000016913	DDX4	100	96.022	ENSCAFG00000006875	DDX4	100	96.022	Canis_familiaris
ENSSSCG00000016913	DDX4	100	88.340	ENSCAFG00020024295	DDX4	100	86.968	Canis_lupus_dingo
ENSSSCG00000016913	DDX4	100	96.296	ENSCHIG00000015567	DDX4	100	96.296	Capra_hircus
ENSSSCG00000016913	DDX4	100	88.203	ENSTSYG00000011848	DDX4	100	88.203	Carlito_syrichta
ENSSSCG00000016913	DDX4	100	71.781	ENSCPOG00000004327	DDX4	100	70.959	Cavia_porcellus
ENSSSCG00000016913	DDX4	100	90.947	ENSCCAG00000028725	DDX4	100	90.947	Cebus_capucinus
ENSSSCG00000016913	DDX4	100	92.455	ENSCATG00000044303	DDX4	100	92.455	Cercocebus_atys
ENSSSCG00000016913	DDX4	100	89.163	ENSCLAG00000005386	DDX4	100	89.163	Chinchilla_lanigera
ENSSSCG00000016913	DDX4	100	91.712	ENSCSAG00000016336	DDX4	100	91.712	Chlorocebus_sabaeus
ENSSSCG00000016913	DDX4	100	82.167	ENSCHOG00000000200	DDX4	100	82.167	Choloepus_hoffmanni
ENSSSCG00000016913	DDX4	75	81.967	ENSCPBG00000026547	DDX4	88	84.526	Chrysemys_picta_bellii
ENSSSCG00000016913	DDX4	64	57.627	ENSCING00000001412	-	82	58.452	Ciona_intestinalis
ENSSSCG00000016913	DDX4	72	54.727	ENSCSAVG00000004304	-	75	60.206	Ciona_savignyi
ENSSSCG00000016913	DDX4	100	83.402	ENSCANG00000003129	DDX4	100	83.402	Colobus_angolensis_palliatus
ENSSSCG00000016913	DDX4	100	91.370	ENSCGRG00001014961	Ddx4	100	91.096	Cricetulus_griseus_chok1gshd
ENSSSCG00000016913	DDX4	100	91.370	ENSCGRG00000001251	Ddx4	100	91.096	Cricetulus_griseus_crigri
ENSSSCG00000016913	DDX4	66	62.552	ENSCSEG00000006039	ddx4	76	60.078	Cynoglossus_semilaevis
ENSSSCG00000016913	DDX4	66	72.860	ENSDARG00000014373	ddx4	99	57.470	Danio_rerio
ENSSSCG00000016913	DDX4	94	90.922	ENSDNOG00000011658	DDX4	100	90.922	Dasypus_novemcinctus
ENSSSCG00000016913	DDX4	100	90.014	ENSDORG00000012201	Ddx4	100	91.518	Dipodomys_ordii
ENSSSCG00000016913	DDX4	66	51.959	FBgn0283442	vas	71	51.318	Drosophila_melanogaster
ENSSSCG00000016913	DDX4	69	94.048	ENSETEG00000001835	DDX4	71	94.048	Echinops_telfairi
ENSSSCG00000016913	DDX4	58	52.995	ENSEBUG00000003290	-	84	52.995	Eptatretus_burgeri
ENSSSCG00000016913	DDX4	100	94.513	ENSEASG00005012143	DDX4	100	94.513	Equus_asinus_asinus
ENSSSCG00000016913	DDX4	100	93.004	ENSECAG00000023616	DDX4	100	93.004	Equus_caballus
ENSSSCG00000016913	DDX4	79	97.347	ENSEEUG00000012462	DDX4	79	97.347	Erinaceus_europaeus
ENSSSCG00000016913	DDX4	67	70.000	ENSELUG00000017328	ddx4	79	67.625	Esox_lucius
ENSSSCG00000016913	DDX4	100	95.062	ENSFCAG00000012560	DDX4	100	95.062	Felis_catus
ENSSSCG00000016913	DDX4	68	73.185	ENSFALG00000010910	DDX4	100	55.263	Ficedula_albicollis
ENSSSCG00000016913	DDX4	100	89.163	ENSFDAG00000003703	DDX4	100	89.163	Fukomys_damarensis
ENSSSCG00000016913	DDX4	69	66.068	ENSFHEG00000019935	ddx4	78	66.068	Fundulus_heteroclitus
ENSSSCG00000016913	DDX4	77	63.732	ENSGALG00000014713	DDX4	71	70.686	Gallus_gallus
ENSSSCG00000016913	DDX4	64	69.546	ENSGAFG00000016509	ddx4	95	57.604	Gambusia_affinis
ENSSSCG00000016913	DDX4	67	68.648	ENSGACG00000015323	ddx4	100	68.648	Gasterosteus_aculeatus
ENSSSCG00000016913	DDX4	100	91.358	ENSGGOG00000002439	DDX4	100	91.358	Gorilla_gorilla
ENSSSCG00000016913	DDX4	68	66.329	ENSHBUG00000001897	ddx4	82	67.146	Haplochromis_burtoni
ENSSSCG00000016913	DDX4	100	82.305	ENSHGLG00000003594	DDX4	100	82.305	Heterocephalus_glaber_female
ENSSSCG00000016913	DDX4	64	68.026	ENSHGLG00100001008	-	90	67.811	Heterocephalus_glaber_male
ENSSSCG00000016913	DDX4	71	64.818	ENSHCOG00000018337	ddx4	86	64.683	Hippocampus_comes
ENSSSCG00000016913	DDX4	70	68.482	ENSIPUG00000001845	ddx4	84	68.340	Ictalurus_punctatus
ENSSSCG00000016913	DDX4	100	94.932	ENSSTOG00000021044	DDX4	100	94.932	Ictidomys_tridecemlineatus
ENSSSCG00000016913	DDX4	100	90.685	ENSJJAG00000015867	Ddx4	100	90.685	Jaculus_jaculus
ENSSSCG00000016913	DDX4	70	67.780	ENSKMAG00000012439	ddx4	80	65.896	Kryptolebias_marmoratus
ENSSSCG00000016913	DDX4	67	73.045	ENSLOCG00000010887	ddx4	100	73.045	Lepisosteus_oculatus
ENSSSCG00000016913	DDX4	100	93.014	ENSLAFG00000005900	DDX4	100	93.014	Loxodonta_africana
ENSSSCG00000016913	DDX4	100	92.318	ENSMFAG00000040186	DDX4	100	92.318	Macaca_fascicularis
ENSSSCG00000016913	DDX4	100	92.318	ENSMMUG00000017386	DDX4	100	92.318	Macaca_mulatta
ENSSSCG00000016913	DDX4	100	92.318	ENSMNEG00000033343	DDX4	100	92.318	Macaca_nemestrina
ENSSSCG00000016913	DDX4	96	85.877	ENSMLEG00000038233	DDX4	100	85.877	Mandrillus_leucophaeus
ENSSSCG00000016913	DDX4	55	67.920	ENSMAMG00000003574	ddx4	100	67.920	Mastacembelus_armatus
ENSSSCG00000016913	DDX4	67	67.556	ENSMZEG00005019116	ddx4	84	67.556	Maylandia_zebra
ENSSSCG00000016913	DDX4	100	78.219	ENSMAUG00000019873	Ddx4	100	78.219	Mesocricetus_auratus
ENSSSCG00000016913	DDX4	95	72.166	ENSMICG00000028132	-	96	77.918	Microcebus_murinus
ENSSSCG00000016913	DDX4	100	93.699	ENSMICG00000008994	-	100	93.699	Microcebus_murinus
ENSSSCG00000016913	DDX4	100	90.959	ENSMOCG00000013250	Ddx4	100	90.685	Microtus_ochrogaster
ENSSSCG00000016913	DDX4	67	65.918	ENSMMOG00000004689	ddx4	86	65.918	Mola_mola
ENSSSCG00000016913	DDX4	100	85.656	ENSMODG00000019511	DDX4	100	85.656	Monodelphis_domestica
ENSSSCG00000016913	DDX4	100	90.561	MGP_CAROLIEiJ_G0018893	Ddx4	100	90.287	Mus_caroli
ENSSSCG00000016913	DDX4	100	90.971	ENSMUSG00000021758	Ddx4	100	90.698	Mus_musculus
ENSSSCG00000016913	DDX4	100	91.096	MGP_PahariEiJ_G0015964	Ddx4	100	90.822	Mus_pahari
ENSSSCG00000016913	DDX4	100	91.518	MGP_SPRETEiJ_G0019772	Ddx4	100	91.245	Mus_spretus
ENSSSCG00000016913	DDX4	100	96.849	ENSMPUG00000007596	DDX4	100	96.849	Mustela_putorius_furo
ENSSSCG00000016913	DDX4	100	85.130	ENSMLUG00000001189	DDX4	100	85.130	Myotis_lucifugus
ENSSSCG00000016913	DDX4	100	89.178	ENSNGAG00000013259	Ddx4	100	89.178	Nannospalax_galili
ENSSSCG00000016913	DDX4	67	65.102	ENSNBRG00000014442	ddx4	100	59.406	Neolamprologus_brichardi
ENSSSCG00000016913	DDX4	100	88.889	ENSNLEG00000001662	DDX4	100	88.889	Nomascus_leucogenys
ENSSSCG00000016913	DDX4	67	82.178	ENSMEUG00000007757	DDX4	71	82.178	Notamacropus_eugenii
ENSSSCG00000016913	DDX4	75	69.763	ENSOPRG00000008071	DDX4	100	69.763	Ochotona_princeps
ENSSSCG00000016913	DDX4	100	87.929	ENSODEG00000016951	-	100	87.929	Octodon_degus
ENSSSCG00000016913	DDX4	100	80.521	ENSODEG00000003839	-	100	80.521	Octodon_degus
ENSSSCG00000016913	DDX4	65	67.789	ENSONIG00000012063	ddx4	98	67.728	Oreochromis_niloticus
ENSSSCG00000016913	DDX4	51	87.366	ENSOANG00000004888	-	94	87.601	Ornithorhynchus_anatinus
ENSSSCG00000016913	DDX4	100	91.495	ENSOCUG00000008597	DDX4	100	91.495	Oryctolagus_cuniculus
ENSSSCG00000016913	DDX4	67	68.839	ENSORLG00000020672	ddx4	83	66.089	Oryzias_latipes
ENSSSCG00000016913	DDX4	64	70.851	ENSORLG00020014206	ddx4	83	66.346	Oryzias_latipes_hni
ENSSSCG00000016913	DDX4	64	70.464	ENSORLG00015016600	ddx4	83	66.221	Oryzias_latipes_hsok
ENSSSCG00000016913	DDX4	70	65.631	ENSOMEG00000010651	ddx4	82	67.134	Oryzias_melastigma
ENSSSCG00000016913	DDX4	100	93.160	ENSOGAG00000007588	DDX4	100	93.160	Otolemur_garnettii
ENSSSCG00000016913	DDX4	100	95.628	ENSOARG00000007644	DDX4	100	95.628	Ovis_aries
ENSSSCG00000016913	DDX4	100	91.495	ENSPPAG00000033915	DDX4	100	91.495	Pan_paniscus
ENSSSCG00000016913	DDX4	100	94.126	ENSPPRG00000011417	DDX4	100	94.536	Panthera_pardus
ENSSSCG00000016913	DDX4	100	94.376	ENSPTIG00000007748	DDX4	100	94.376	Panthera_tigris_altaica
ENSSSCG00000016913	DDX4	100	91.495	ENSPTRG00000016884	DDX4	100	91.495	Pan_troglodytes
ENSSSCG00000016913	DDX4	100	92.181	ENSPANG00000010945	DDX4	100	92.181	Papio_anubis
ENSSSCG00000016913	DDX4	85	76.160	ENSPSIG00000017179	DDX4	99	76.726	Pelodiscus_sinensis
ENSSSCG00000016913	DDX4	51	63.710	ENSPMGG00000015642	ddx4	93	63.710	Periophthalmus_magnuspinnatus
ENSSSCG00000016913	DDX4	100	90.685	ENSPEMG00000010086	Ddx4	100	90.411	Peromyscus_maniculatus_bairdii
ENSSSCG00000016913	DDX4	92	85.947	ENSPCIG00000024758	DDX4	100	85.947	Phascolarctos_cinereus
ENSSSCG00000016913	DDX4	63	70.130	ENSPFOG00000018842	ddx4	95	57.757	Poecilia_formosa
ENSSSCG00000016913	DDX4	63	70.346	ENSPLAG00000020726	ddx4	95	57.911	Poecilia_latipinna
ENSSSCG00000016913	DDX4	63	70.130	ENSPMEG00000002976	ddx4	95	57.757	Poecilia_mexicana
ENSSSCG00000016913	DDX4	64	70.194	ENSPREG00000017840	ddx4	95	57.757	Poecilia_reticulata
ENSSSCG00000016913	DDX4	100	91.907	ENSPPYG00000015472	DDX4	100	91.907	Pongo_abelii
ENSSSCG00000016913	DDX4	100	78.738	ENSPCAG00000002675	DDX4	100	78.738	Procavia_capensis
ENSSSCG00000016913	DDX4	97	95.319	ENSPVAG00000002448	DDX4	100	95.319	Pteropus_vampyrus
ENSSSCG00000016913	DDX4	67	67.351	ENSPNYG00000022212	ddx4	84	67.351	Pundamilia_nyererei
ENSSSCG00000016913	DDX4	59	74.074	ENSPNAG00000003686	ddx4	86	61.831	Pygocentrus_nattereri
ENSSSCG00000016913	DDX4	96	91.038	ENSRNOG00000026686	Ddx4	99	90.754	Rattus_norvegicus
ENSSSCG00000016913	DDX4	100	92.044	ENSRBIG00000028795	DDX4	100	92.044	Rhinopithecus_bieti
ENSSSCG00000016913	DDX4	100	91.907	ENSRROG00000045392	DDX4	100	91.907	Rhinopithecus_roxellana
ENSSSCG00000016913	DDX4	66	45.859	YPL119C	DBP1	68	49.881	Saccharomyces_cerevisiae
ENSSSCG00000016913	DDX4	100	90.947	ENSSBOG00000035231	DDX4	100	90.947	Saimiri_boliviensis_boliviensis
ENSSSCG00000016913	DDX4	100	85.014	ENSSHAG00000009132	DDX4	100	85.014	Sarcophilus_harrisii
ENSSSCG00000016913	DDX4	67	71.457	ENSSFOG00015006531	ddx4	80	68.834	Scleropages_formosus
ENSSSCG00000016913	DDX4	66	67.149	ENSSMAG00000009800	ddx4	87	61.905	Scophthalmus_maximus
ENSSSCG00000016913	DDX4	67	69.136	ENSSDUG00000022015	ddx4	81	66.216	Seriola_dumerili
ENSSSCG00000016913	DDX4	55	69.674	ENSSLDG00000015312	ddx4	100	69.674	Seriola_lalandi_dorsalis
ENSSSCG00000016913	DDX4	100	82.442	ENSSARG00000004206	DDX4	100	82.442	Sorex_araneus
ENSSSCG00000016913	DDX4	63	86.492	ENSSPUG00000007260	DDX4	79	86.492	Sphenodon_punctatus
ENSSSCG00000016913	DDX4	55	66.500	ENSSPAG00000014307	ddx4	100	66.500	Stegastes_partitus
ENSSSCG00000016913	DDX4	60	76.941	ENSTGUG00000002548	DDX4	100	76.941	Taeniopygia_guttata
ENSSSCG00000016913	DDX4	70	58.755	ENSTNIG00000014474	ddx4	98	56.483	Tetraodon_nigroviridis
ENSSSCG00000016913	DDX4	87	76.451	ENSTBEG00000003569	DDX4	87	76.451	Tupaia_belangeri
ENSSSCG00000016913	DDX4	100	90.535	ENSTTRG00000009316	DDX4	100	90.398	Tursiops_truncatus
ENSSSCG00000016913	DDX4	100	87.891	ENSUAMG00000023028	DDX4	100	87.755	Ursus_americanus
ENSSSCG00000016913	DDX4	100	88.752	ENSUMAG00000009291	DDX4	100	88.615	Ursus_maritimus
ENSSSCG00000016913	DDX4	99	93.352	ENSVPAG00000009491	DDX4	99	93.767	Vicugna_pacos
ENSSSCG00000016913	DDX4	100	96.022	ENSVVUG00000021369	DDX4	100	96.022	Vulpes_vulpes
ENSSSCG00000016913	DDX4	93	56.377	ENSXETG00000030832	DDX4	86	61.386	Xenopus_tropicalis
ENSSSCG00000016913	DDX4	64	70.626	ENSXMAG00000009677	ddx4	95	58.552	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISS	Component
GO:0007140	male meiotic nuclear division	-	ISS	Process
GO:0007141	male meiosis I	-	ISS	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007283	spermatogenesis	-	ISS	Process
GO:0010529	negative regulation of transposition	-	ISS	Process
GO:0016887	ATPase activity	-	ISS	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0033391	chromatoid body	10781947.	IDA	Component
GO:0034587	piRNA metabolic process	-	ISS	Process
GO:0043046	DNA methylation involved in gamete generation	-	ISS	Process
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0071546	pi-body	-	ISS	Component
GO:0071547	piP-body	-	ISS	Component
GO:1990511	piRNA biosynthetic process	-	ISS	Process