EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000017069 (Gene tree)
Gene ID: 100525545
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 91347 bases
Position: chr16:68393572-68484918
Accession: 100525545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000044410	La	PF05383.17	1.3e-20	1	1
ENSSSCP00000018085	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000043906	LARP1-201	3933	-	ENSSSCP00000044410	895 (aa)	-	A0A287AKJ3
ENSSSCT00000018585	LARP1-202	3306	XM_021076708	ENSSSCP00000018085	1101 (aa)	XP_020932367	F1RQC5

Gene Model

Click here to download ENSSSCG00000017069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000017069	LARP1	99	60.623	ENSSSCG00000034280	LARP1B	99	77.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017069	LARP1	100	95.982	ENSG00000155506	LARP1	100	95.935	Homo_sapiens
ENSSSCG00000017069	LARP1	88	81.938	ENSAPOG00000020685	larp1	98	82.569	Acanthochromis_polyacanthus
ENSSSCG00000017069	LARP1	100	97.321	ENSAMEG00000016673	LARP1	100	97.182	Ailuropoda_melanoleuca
ENSSSCG00000017069	LARP1	99	67.598	ENSACIG00000012994	larp1	94	74.831	Amphilophus_citrinellus
ENSSSCG00000017069	LARP1	86	73.552	ENSAOCG00000007792	larp1	95	72.593	Amphiprion_ocellaris
ENSSSCG00000017069	LARP1	99	69.488	ENSAPEG00000022246	larp1	99	62.857	Amphiprion_percula
ENSSSCG00000017069	LARP1	97	69.310	ENSATEG00000013523	larp1	96	61.623	Anabas_testudineus
ENSSSCG00000017069	LARP1	92	83.894	ENSAPLG00000007559	LARP1	99	83.632	Anas_platyrhynchos
ENSSSCG00000017069	LARP1	100	79.956	ENSACAG00000004071	LARP1	100	79.501	Anolis_carolinensis
ENSSSCG00000017069	LARP1	100	96.540	ENSANAG00000029949	LARP1	100	93.043	Aotus_nancymaae
ENSSSCG00000017069	LARP1	99	69.180	ENSACLG00000015256	larp1	96	67.765	Astatotilapia_calliptera
ENSSSCG00000017069	LARP1	95	72.430	ENSAMXG00000000859	larp1	88	70.724	Astyanax_mexicanus
ENSSSCG00000017069	LARP1	100	97.321	ENSBTAG00000008443	LARP1	100	96.736	Bos_taurus
ENSSSCG00000017069	LARP1	100	96.429	ENSCJAG00000004454	LARP1	100	94.374	Callithrix_jacchus
ENSSSCG00000017069	LARP1	99	97.877	ENSCAFG00000017639	LARP1	99	97.906	Canis_familiaris
ENSSSCG00000017069	LARP1	100	97.879	ENSCAFG00020023860	LARP1	100	97.879	Canis_lupus_dingo
ENSSSCG00000017069	LARP1	100	96.763	ENSCHIG00000014414	LARP1	100	94.112	Capra_hircus
ENSSSCG00000017069	LARP1	100	95.866	ENSTSYG00000013732	LARP1	99	92.461	Carlito_syrichta
ENSSSCG00000017069	LARP1	92	94.196	ENSCAPG00000013865	LARP1	87	93.861	Cavia_aperea
ENSSSCG00000017069	LARP1	100	96.540	ENSCPOG00000003377	LARP1	100	96.230	Cavia_porcellus
ENSSSCG00000017069	LARP1	100	96.540	ENSCCAG00000025201	LARP1	100	94.374	Cebus_capucinus
ENSSSCG00000017069	LARP1	100	96.094	ENSCATG00000030675	LARP1	100	91.379	Cercocebus_atys
ENSSSCG00000017069	LARP1	100	96.652	ENSCLAG00000012755	LARP1	97	96.339	Chinchilla_lanigera
ENSSSCG00000017069	LARP1	100	92.522	ENSCSAG00000010800	LARP1	100	92.522	Chlorocebus_sabaeus
ENSSSCG00000017069	LARP1	91	90.370	ENSCHOG00000012716	LARP1	92	93.421	Choloepus_hoffmanni
ENSSSCG00000017069	LARP1	100	81.305	ENSCPBG00000002173	LARP1	94	81.224	Chrysemys_picta_bellii
ENSSSCG00000017069	LARP1	100	95.982	ENSCANG00000037418	LARP1	94	95.455	Colobus_angolensis_palliatus
ENSSSCG00000017069	LARP1	100	95.759	ENSCGRG00001016913	Larp1	100	90.472	Cricetulus_griseus_chok1gshd
ENSSSCG00000017069	LARP1	96	90.487	ENSCGRG00000009916	Larp1	99	91.087	Cricetulus_griseus_crigri
ENSSSCG00000017069	LARP1	98	69.180	ENSCSEG00000016431	larp1	97	64.149	Cynoglossus_semilaevis
ENSSSCG00000017069	LARP1	99	68.282	ENSCVAG00000022687	larp1	87	67.890	Cyprinodon_variegatus
ENSSSCG00000017069	LARP1	98	67.914	ENSDARG00000101722	larp1	95	65.416	Danio_rerio
ENSSSCG00000017069	LARP1	100	95.551	ENSDNOG00000012073	LARP1	100	93.852	Dasypus_novemcinctus
ENSSSCG00000017069	LARP1	100	92.746	ENSDORG00000002897	Larp1	99	92.678	Dipodomys_ordii
ENSSSCG00000017069	LARP1	92	96.131	ENSETEG00000020251	LARP1	100	96.141	Echinops_telfairi
ENSSSCG00000017069	LARP1	100	97.545	ENSEASG00005001070	LARP1	100	97.189	Equus_asinus_asinus
ENSSSCG00000017069	LARP1	100	97.545	ENSECAG00000017002	LARP1	79	97.189	Equus_caballus
ENSSSCG00000017069	LARP1	100	90.960	ENSEEUG00000001065	LARP1	100	90.909	Erinaceus_europaeus
ENSSSCG00000017069	LARP1	99	68.381	ENSELUG00000019403	larp1	99	62.567	Esox_lucius
ENSSSCG00000017069	LARP1	100	97.656	ENSFCAG00000000592	LARP1	100	97.552	Felis_catus
ENSSSCG00000017069	LARP1	93	80.874	ENSFALG00000008335	LARP1	99	81.161	Ficedula_albicollis
ENSSSCG00000017069	LARP1	100	96.540	ENSFDAG00000021125	LARP1	100	96.230	Fukomys_damarensis
ENSSSCG00000017069	LARP1	64	53.867	ENSFHEG00000020307	larp1	92	63.636	Fundulus_heteroclitus
ENSSSCG00000017069	LARP1	100	82.000	ENSGALG00000040109	LARP1	97	79.171	Gallus_gallus
ENSSSCG00000017069	LARP1	100	80.994	ENSGAGG00000025113	LARP1	99	80.543	Gopherus_agassizii
ENSSSCG00000017069	LARP1	100	95.982	ENSGGOG00000006048	LARP1	94	95.351	Gorilla_gorilla
ENSSSCG00000017069	LARP1	99	69.341	ENSHBUG00000020762	larp1	95	69.757	Haplochromis_burtoni
ENSSSCG00000017069	LARP1	100	95.871	ENSHGLG00000006267	LARP1	100	90.778	Heterocephalus_glaber_female
ENSSSCG00000017069	LARP1	100	95.982	ENSHGLG00100014230	-	100	95.916	Heterocephalus_glaber_male
ENSSSCG00000017069	LARP1	98	79.025	ENSHGLG00100003395	-	96	76.409	Heterocephalus_glaber_male
ENSSSCG00000017069	LARP1	92	79.108	ENSHCOG00000010786	larp1	99	79.108	Hippocampus_comes
ENSSSCG00000017069	LARP1	96	67.126	ENSIPUG00000019105	Larp1	93	66.044	Ictalurus_punctatus
ENSSSCG00000017069	LARP1	100	93.862	ENSSTOG00000005678	LARP1	99	93.828	Ictidomys_tridecemlineatus
ENSSSCG00000017069	LARP1	100	89.732	ENSJJAG00000016950	Larp1	100	85.935	Jaculus_jaculus
ENSSSCG00000017069	LARP1	96	70.127	ENSKMAG00000018468	larp1	95	68.470	Kryptolebias_marmoratus
ENSSSCG00000017069	LARP1	99	69.551	ENSLBEG00000027172	larp1	99	62.354	Labrus_bergylta
ENSSSCG00000017069	LARP1	92	75.966	ENSLOCG00000012457	larp1	99	68.822	Lepisosteus_oculatus
ENSSSCG00000017069	LARP1	100	94.866	ENSLAFG00000008991	LARP1	100	92.224	Loxodonta_africana
ENSSSCG00000017069	LARP1	100	95.647	ENSMFAG00000031651	LARP1	94	95.099	Macaca_fascicularis
ENSSSCG00000017069	LARP1	100	92.188	ENSMMUG00000009411	LARP1	99	92.372	Macaca_mulatta
ENSSSCG00000017069	LARP1	100	95.759	ENSMNEG00000039294	LARP1	100	95.759	Macaca_nemestrina
ENSSSCG00000017069	LARP1	100	95.982	ENSMLEG00000035142	LARP1	94	95.933	Mandrillus_leucophaeus
ENSSSCG00000017069	LARP1	99	70.601	ENSMAMG00000021788	larp1	99	63.246	Mastacembelus_armatus
ENSSSCG00000017069	LARP1	99	69.180	ENSMZEG00005009345	larp1	96	67.765	Maylandia_zebra
ENSSSCG00000017069	LARP1	100	80.702	ENSMGAG00000005696	LARP1	100	80.495	Meleagris_gallopavo
ENSSSCG00000017069	LARP1	100	95.759	ENSMAUG00000001385	Larp1	100	90.290	Mesocricetus_auratus
ENSSSCG00000017069	LARP1	99	96.872	ENSMICG00000000837	LARP1	99	96.872	Microcebus_murinus
ENSSSCG00000017069	LARP1	100	95.982	ENSMOCG00000008920	Larp1	100	90.744	Microtus_ochrogaster
ENSSSCG00000017069	LARP1	88	59.474	ENSMMOG00000013364	larp1	95	52.413	Mola_mola
ENSSSCG00000017069	LARP1	100	82.965	ENSMODG00000008663	LARP1	99	83.109	Monodelphis_domestica
ENSSSCG00000017069	LARP1	99	69.189	ENSMALG00000017180	larp1	95	66.557	Monopterus_albus
ENSSSCG00000017069	LARP1	100	95.424	MGP_CAROLIEiJ_G0016383	Larp1	100	90.472	Mus_caroli
ENSSSCG00000017069	LARP1	100	95.536	ENSMUSG00000037331	Larp1	100	90.472	Mus_musculus
ENSSSCG00000017069	LARP1	100	95.871	MGP_PahariEiJ_G0017518	Larp1	100	90.752	Mus_pahari
ENSSSCG00000017069	LARP1	100	95.536	MGP_SPRETEiJ_G0017225	Larp1	100	90.653	Mus_spretus
ENSSSCG00000017069	LARP1	82	97.461	ENSMPUG00000013564	LARP1	99	97.461	Mustela_putorius_furo
ENSSSCG00000017069	LARP1	99	92.833	ENSMLUG00000002608	LARP1	100	93.089	Myotis_lucifugus
ENSSSCG00000017069	LARP1	100	91.406	ENSNGAG00000001098	Larp1	99	91.327	Nannospalax_galili
ENSSSCG00000017069	LARP1	96	69.151	ENSNBRG00000008963	larp1	94	67.528	Neolamprologus_brichardi
ENSSSCG00000017069	LARP1	100	92.857	ENSNLEG00000016588	LARP1	99	89.979	Nomascus_leucogenys
ENSSSCG00000017069	LARP1	100	78.795	ENSMEUG00000002957	LARP1	100	77.277	Notamacropus_eugenii
ENSSSCG00000017069	LARP1	100	95.871	ENSOPRG00000013014	LARP1	100	95.812	Ochotona_princeps
ENSSSCG00000017069	LARP1	100	95.647	ENSODEG00000010824	LARP1	100	95.393	Octodon_degus
ENSSSCG00000017069	LARP1	99	70.379	ENSONIG00000017308	larp1	97	65.712	Oreochromis_niloticus
ENSSSCG00000017069	LARP1	100	82.637	ENSOANG00000005096	LARP1	100	81.663	Ornithorhynchus_anatinus
ENSSSCG00000017069	LARP1	100	97.210	ENSOCUG00000013066	LARP1	100	94.918	Oryctolagus_cuniculus
ENSSSCG00000017069	LARP1	97	68.636	ENSORLG00000000824	larp1	96	70.717	Oryzias_latipes
ENSSSCG00000017069	LARP1	97	68.636	ENSORLG00020022241	larp1	97	63.095	Oryzias_latipes_hni
ENSSSCG00000017069	LARP1	97	66.705	ENSORLG00015007538	larp1	97	61.595	Oryzias_latipes_hsok
ENSSSCG00000017069	LARP1	97	66.705	ENSOMEG00000003134	larp1	97	61.609	Oryzias_melastigma
ENSSSCG00000017069	LARP1	100	96.763	ENSOGAG00000016750	LARP1	100	96.335	Otolemur_garnettii
ENSSSCG00000017069	LARP1	100	94.866	ENSOARG00000009893	LARP1	99	94.979	Ovis_aries
ENSSSCG00000017069	LARP1	100	95.982	ENSPPAG00000042993	LARP1	94	95.455	Pan_paniscus
ENSSSCG00000017069	LARP1	100	96.205	ENSPPRG00000009780	LARP1	96	95.370	Panthera_pardus
ENSSSCG00000017069	LARP1	100	96.429	ENSPTIG00000007013	LARP1	96	95.370	Panthera_tigris_altaica
ENSSSCG00000017069	LARP1	100	95.759	ENSPTRG00000017447	LARP1	100	91.198	Pan_troglodytes
ENSSSCG00000017069	LARP1	100	96.094	ENSPANG00000008080	LARP1	100	91.379	Papio_anubis
ENSSSCG00000017069	LARP1	98	70.800	ENSPKIG00000010096	larp1	97	65.213	Paramormyrops_kingsleyae
ENSSSCG00000017069	LARP1	98	67.540	ENSPKIG00000017153	-	99	61.538	Paramormyrops_kingsleyae
ENSSSCG00000017069	LARP1	93	68.483	ENSPMGG00000011599	larp1	92	67.884	Periophthalmus_magnuspinnatus
ENSSSCG00000017069	LARP1	100	92.188	ENSPEMG00000022523	Larp1	99	92.259	Peromyscus_maniculatus_bairdii
ENSSSCG00000017069	LARP1	97	84.271	ENSPCIG00000019242	LARP1	90	79.722	Phascolarctos_cinereus
ENSSSCG00000017069	LARP1	96	69.738	ENSPFOG00000005836	larp1	96	62.266	Poecilia_formosa
ENSSSCG00000017069	LARP1	96	69.511	ENSPLAG00000008936	larp1	96	62.658	Poecilia_latipinna
ENSSSCG00000017069	LARP1	96	70.193	ENSPMEG00000013656	larp1	96	62.533	Poecilia_mexicana
ENSSSCG00000017069	LARP1	96	69.511	ENSPREG00000005726	larp1	95	67.601	Poecilia_reticulata
ENSSSCG00000017069	LARP1	100	91.295	ENSPCAG00000006407	LARP1	100	91.414	Procavia_capensis
ENSSSCG00000017069	LARP1	100	88.281	ENSPCOG00000016949	LARP1	100	92.147	Propithecus_coquereli
ENSSSCG00000017069	LARP1	100	96.878	ENSPVAG00000002262	LARP1	100	96.290	Pteropus_vampyrus
ENSSSCG00000017069	LARP1	99	69.180	ENSPNYG00000007938	larp1	96	67.765	Pundamilia_nyererei
ENSSSCG00000017069	LARP1	99	70.866	ENSPNAG00000021427	larp1	89	70.873	Pygocentrus_nattereri
ENSSSCG00000017069	LARP1	100	92.411	ENSRNOG00000031544	Larp1	99	92.476	Rattus_norvegicus
ENSSSCG00000017069	LARP1	100	95.759	ENSRBIG00000038005	LARP1	96	93.286	Rhinopithecus_bieti
ENSSSCG00000017069	LARP1	100	95.871	ENSRROG00000034073	LARP1	100	95.312	Rhinopithecus_roxellana
ENSSSCG00000017069	LARP1	100	96.429	ENSSBOG00000019816	LARP1	100	93.006	Saimiri_boliviensis_boliviensis
ENSSSCG00000017069	LARP1	100	84.521	ENSSHAG00000011115	LARP1	100	84.463	Sarcophilus_harrisii
ENSSSCG00000017069	LARP1	98	70.282	ENSSFOG00015018058	-	97	64.167	Scleropages_formosus
ENSSSCG00000017069	LARP1	98	68.519	ENSSFOG00015020304	larp1	93	67.719	Scleropages_formosus
ENSSSCG00000017069	LARP1	92	68.307	ENSSMAG00000007468	larp1	98	62.273	Scophthalmus_maximus
ENSSSCG00000017069	LARP1	99	69.147	ENSSDUG00000000268	larp1	95	70.499	Seriola_dumerili
ENSSSCG00000017069	LARP1	87	74.427	ENSSLDG00000016505	larp1	89	75.885	Seriola_lalandi_dorsalis
ENSSSCG00000017069	LARP1	68	93.286	ENSSARG00000013907	-	89	94.172	Sorex_araneus
ENSSSCG00000017069	LARP1	100	80.816	ENSSPUG00000012179	-	100	74.713	Sphenodon_punctatus
ENSSSCG00000017069	LARP1	99	68.838	ENSSPAG00000003910	larp1	99	63.363	Stegastes_partitus
ENSSSCG00000017069	LARP1	96	82.947	ENSTGUG00000000704	LARP1	100	82.898	Taeniopygia_guttata
ENSSSCG00000017069	LARP1	99	67.437	ENSTRUG00000009470	larp1	99	60.762	Takifugu_rubripes
ENSSSCG00000017069	LARP1	92	93.954	ENSTBEG00000003381	LARP1	100	94.131	Tupaia_belangeri
ENSSSCG00000017069	LARP1	100	97.545	ENSTTRG00000015934	LARP1	100	97.382	Tursiops_truncatus
ENSSSCG00000017069	LARP1	100	97.552	ENSUAMG00000019334	LARP1	100	97.552	Ursus_americanus
ENSSSCG00000017069	LARP1	99	94.072	ENSUMAG00000002934	LARP1	99	94.316	Ursus_maritimus
ENSSSCG00000017069	LARP1	100	97.879	ENSVVUG00000004644	LARP1	100	97.879	Vulpes_vulpes
ENSSSCG00000017069	LARP1	99	76.275	ENSXETG00000008413	larp1	94	75.326	Xenopus_tropicalis
ENSSSCG00000017069	LARP1	83	74.069	ENSXCOG00000004022	larp1	93	74.719	Xiphophorus_couchianus
ENSSSCG00000017069	LARP1	96	69.511	ENSXMAG00000018780	larp1	96	62.198	Xiphophorus_maculatus