EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSSSCG00000017155 (Gene tree)
Gene ID
100101926
Gene Symbol
EIF4A3
Alias
DDX48|eIF4A-III
Full Name
eukaryotic translation initiation factor 4A3
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
26167 bases
Position
chr12:2285579-2311745
Accession
100101926
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000018178DEADPF00270.294.2e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000018679-1554-ENSSSCP00000018178411 (aa)-A6M931
Gene Model
Click here to download ENSSSCG00000017155's gene model file
Pathways
Pathway IDPathway NameSource
ssc03013RNA transportKEGG
ssc03015mRNA surveillance pathwayKEGG
ssc03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017155's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000017155EIF4A39034.577ENSSSCG00000026430DDX3Y7234.577
ENSSSCG00000017155EIF4A39131.398ENSSSCG00000025329DDX498031.398
ENSSSCG00000017155EIF4A39430.637ENSSSCG00000016913DDX45630.637
ENSSSCG00000017155EIF4A38634.078ENSSSCG00000024444DDX595934.078
ENSSSCG00000017155EIF4A38930.189ENSSSCG00000022915DDX275230.189
ENSSSCG00000017155EIF4A38638.017ENSSSCG00000015223DDX259637.430
ENSSSCG00000017155EIF4A38532.303ENSSSCG00000012169-5632.303
ENSSSCG00000017155EIF4A39137.831ENSSSCG00000015097DDX67837.831
ENSSSCG00000017155EIF4A39271.429ENSSSCG00000011803EIF4A29570.169
ENSSSCG00000017155EIF4A38633.154ENSSSCG00000032642DDX415933.154
ENSSSCG00000017155EIF4A39966.749ENSSSCG00000017957EIF4A19770.106
ENSSSCG00000017155EIF4A38938.108ENSSSCG00000001400DDX39B9637.538
ENSSSCG00000017155EIF4A38235.277ENSSSCG00000000104DDX177133.557
ENSSSCG00000017155EIF4A38234.857ENSSSCG00000032092DDX56734.857
ENSSSCG00000017155EIF4A39034.577ENSSSCG00000012252DDX3X6134.577
ENSSSCG00000017155EIF4A38532.386ENSSSCG00000004287-5832.386
ENSSSCG00000017155EIF4A38632.888ENSSSCG00000010246DDX505032.888
ENSSSCG00000017155EIF4A39331.920ENSSSCG00000010247DDX215031.920
ENSSSCG00000017155EIF4A39432.405ENSSSCG00000033149DDX478432.353
ENSSSCG00000017155EIF4A38937.795ENSSSCG00000002722-7837.795
ENSSSCG00000017155EIF4A37931.700ENSSSCG00000009771DDX556231.700
ENSSSCG00000017155EIF4A38641.808ENSSSCG00000035903-9141.808
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000017155EIF4A310099.757ENSG00000141543EIF4A310099.757Homo_sapiens
ENSSSCG00000017155EIF4A39997.537ENSAPOG00000017112eif4a310097.537Acanthochromis_polyacanthus
ENSSSCG00000017155EIF4A39999.507ENSAMEG00000015194EIF4A310099.507Ailuropoda_melanoleuca
ENSSSCG00000017155EIF4A39997.537ENSACIG00000009719eif4a310097.537Amphilophus_citrinellus
ENSSSCG00000017155EIF4A39997.537ENSAOCG00000021655eif4a310097.537Amphiprion_ocellaris
ENSSSCG00000017155EIF4A39997.537ENSAPEG00000018658eif4a310097.537Amphiprion_percula
ENSSSCG00000017155EIF4A39997.537ENSATEG00000014793eif4a310097.537Anabas_testudineus
ENSSSCG00000017155EIF4A38699.716ENSAPLG00000014717EIF4A310099.716Anas_platyrhynchos
ENSSSCG00000017155EIF4A39998.522ENSACAG00000014384EIF4A39498.522Anolis_carolinensis
ENSSSCG00000017155EIF4A3100100.000ENSANAG00000005557EIF4A3100100.000Aotus_nancymaae
ENSSSCG00000017155EIF4A39997.291ENSACLG00000004174eif4a310097.291Astatotilapia_calliptera
ENSSSCG00000017155EIF4A39897.525ENSAMXG00000020882eif4a39997.778Astyanax_mexicanus
ENSSSCG00000017155EIF4A3100100.000ENSBTAG00000016023EIF4A3100100.000Bos_taurus
ENSSSCG00000017155EIF4A39687.277WBGene00018007F33D11.109887.277Caenorhabditis_elegans
ENSSSCG00000017155EIF4A39687.532WBGene00022029Y65B4A.610089.247Caenorhabditis_elegans
ENSSSCG00000017155EIF4A3100100.000ENSCJAG00000048589-100100.000Callithrix_jacchus
ENSSSCG00000017155EIF4A310094.404ENSCJAG00000016777-10094.404Callithrix_jacchus
ENSSSCG00000017155EIF4A310099.757ENSCAFG00000005614EIF4A310099.757Canis_familiaris
ENSSSCG00000017155EIF4A310099.757ENSCAFG00020008253EIF4A310099.757Canis_lupus_dingo
ENSSSCG00000017155EIF4A3100100.000ENSCHIG00000024284EIF4A3100100.000Capra_hircus
ENSSSCG00000017155EIF4A3100100.000ENSTSYG00000008738EIF4A3100100.000Carlito_syrichta
ENSSSCG00000017155EIF4A38694.648ENSCAPG00000000964EIF4A39294.648Cavia_aperea
ENSSSCG00000017155EIF4A3100100.000ENSCPOG00000006485EIF4A3100100.000Cavia_porcellus
ENSSSCG00000017155EIF4A3100100.000ENSCCAG00000036144EIF4A3100100.000Cebus_capucinus
ENSSSCG00000017155EIF4A310099.757ENSCATG00000039262-10099.757Cercocebus_atys
ENSSSCG00000017155EIF4A310091.971ENSCATG00000039629-10091.971Cercocebus_atys
ENSSSCG00000017155EIF4A3100100.000ENSCLAG00000014502EIF4A3100100.000Chinchilla_lanigera
ENSSSCG00000017155EIF4A38199.096ENSCPBG00000017801EIF4A39899.096Chrysemys_picta_bellii
ENSSSCG00000017155EIF4A39889.082ENSCING00000007818-9889.082Ciona_intestinalis
ENSSSCG00000017155EIF4A39092.412ENSCSAVG00000009920-10092.412Ciona_savignyi
ENSSSCG00000017155EIF4A310081.022ENSCANG00000043503EIF4A310081.022Colobus_angolensis_palliatus
ENSSSCG00000017155EIF4A310099.757ENSCGRG00001022918-10099.757Cricetulus_griseus_chok1gshd
ENSSSCG00000017155EIF4A39982.222ENSCGRG00001018048-10082.222Cricetulus_griseus_chok1gshd
ENSSSCG00000017155EIF4A39981.975ENSCGRG00000001983-9981.975Cricetulus_griseus_crigri
ENSSSCG00000017155EIF4A386100.000ENSCGRG00000017119-100100.000Cricetulus_griseus_crigri
ENSSSCG00000017155EIF4A310096.594ENSCSEG00000021058eif4a310096.594Cynoglossus_semilaevis
ENSSSCG00000017155EIF4A39997.537ENSCVAG00000006864eif4a310097.537Cyprinodon_variegatus
ENSSSCG00000017155EIF4A39997.044ENSDARG00000102978eif4a310097.044Danio_rerio
ENSSSCG00000017155EIF4A386100.000ENSDNOG00000009027EIF4A396100.000Dasypus_novemcinctus
ENSSSCG00000017155EIF4A3100100.000ENSDORG00000013028-100100.000Dipodomys_ordii
ENSSSCG00000017155EIF4A39787.719FBgn0037573CG74839987.719Drosophila_melanogaster
ENSSSCG00000017155EIF4A39795.214ENSEBUG00000003713eif4a39791.607Eptatretus_burgeri
ENSSSCG00000017155EIF4A3100100.000ENSEASG00005005107EIF4A3100100.000Equus_asinus_asinus
ENSSSCG00000017155EIF4A3100100.000ENSECAG00000015925EIF4A3100100.000Equus_caballus
ENSSSCG00000017155EIF4A310093.674ENSEEUG00000006008EIF4A310093.674Erinaceus_europaeus
ENSSSCG00000017155EIF4A39798.489ENSELUG00000018528eif4a39898.489Esox_lucius
ENSSSCG00000017155EIF4A3100100.000ENSFCAG00000008246EIF4A3100100.000Felis_catus
ENSSSCG00000017155EIF4A386100.000ENSFALG00000002343EIF4A3100100.000Ficedula_albicollis
ENSSSCG00000017155EIF4A3100100.000ENSFDAG00000020774EIF4A3100100.000Fukomys_damarensis
ENSSSCG00000017155EIF4A39597.959ENSGMOG00000001560eif4a310097.959Gadus_morhua
ENSSSCG00000017155EIF4A39997.561ENSGALG00000008530EIF4A39997.561Gallus_gallus
ENSSSCG00000017155EIF4A39997.783ENSGAFG00000013487eif4a310097.783Gambusia_affinis
ENSSSCG00000017155EIF4A39996.798ENSGACG00000020004eif4a310096.798Gasterosteus_aculeatus
ENSSSCG00000017155EIF4A39898.762ENSGAGG00000016434EIF4A39998.762Gopherus_agassizii
ENSSSCG00000017155EIF4A310099.757ENSGGOG00000012918EIF4A310099.757Gorilla_gorilla
ENSSSCG00000017155EIF4A39997.537ENSHBUG00000014892eif4a310097.537Haplochromis_burtoni
ENSSSCG00000017155EIF4A3100100.000ENSHGLG00000004635EIF4A3100100.000Heterocephalus_glaber_female
ENSSSCG00000017155EIF4A3100100.000ENSHGLG00100006837EIF4A3100100.000Heterocephalus_glaber_male
ENSSSCG00000017155EIF4A39783.619ENSHCOG00000011335eif4a38883.619Hippocampus_comes
ENSSSCG00000017155EIF4A39897.525ENSIPUG00000021785eif4a39997.525Ictalurus_punctatus
ENSSSCG00000017155EIF4A3100100.000ENSSTOG00000002664EIF4A3100100.000Ictidomys_tridecemlineatus
ENSSSCG00000017155EIF4A310099.270ENSJJAG00000016503-10099.270Jaculus_jaculus
ENSSSCG00000017155EIF4A310099.757ENSJJAG00000015870-10099.757Jaculus_jaculus
ENSSSCG00000017155EIF4A39794.264ENSKMAG00000010113eif4a39394.264Kryptolebias_marmoratus
ENSSSCG00000017155EIF4A38897.245ENSLBEG00000020356eif4a39797.245Labrus_bergylta
ENSSSCG00000017155EIF4A39797.750ENSLACG00000000108EIF4A39997.750Latimeria_chalumnae
ENSSSCG00000017155EIF4A39897.772ENSLOCG00000015796eif4a39897.772Lepisosteus_oculatus
ENSSSCG00000017155EIF4A3100100.000ENSLAFG00000015628EIF4A3100100.000Loxodonta_africana
ENSSSCG00000017155EIF4A39989.242ENSMFAG00000018955-9989.242Macaca_fascicularis
ENSSSCG00000017155EIF4A310099.757ENSMFAG00000043778EIF4A310099.757Macaca_fascicularis
ENSSSCG00000017155EIF4A310099.513ENSMMUG00000009590EIF4A310099.513Macaca_mulatta
ENSSSCG00000017155EIF4A310089.294ENSMMUG00000007050-10089.294Macaca_mulatta
ENSSSCG00000017155EIF4A39999.754ENSMNEG00000039333-9599.754Macaca_nemestrina
ENSSSCG00000017155EIF4A39890.274ENSMNEG00000038447-10090.274Macaca_nemestrina
ENSSSCG00000017155EIF4A386100.000ENSMLEG00000032948EIF4A3100100.000Mandrillus_leucophaeus
ENSSSCG00000017155EIF4A39997.537ENSMAMG00000017369eif4a310097.537Mastacembelus_armatus
ENSSSCG00000017155EIF4A39990.394ENSMZEG00005015371eif4a310090.394Maylandia_zebra
ENSSSCG00000017155EIF4A39997.537ENSMZEG00005000259-10097.537Maylandia_zebra
ENSSSCG00000017155EIF4A386100.000ENSMGAG00000007270EIF4A3100100.000Meleagris_gallopavo
ENSSSCG00000017155EIF4A310099.757ENSMAUG00000012955-10099.757Mesocricetus_auratus
ENSSSCG00000017155EIF4A39992.593ENSMICG00000045127-10092.593Microcebus_murinus
ENSSSCG00000017155EIF4A39992.346ENSMICG00000044243-10092.346Microcebus_murinus
ENSSSCG00000017155EIF4A39993.842ENSMICG00000041585-9893.842Microcebus_murinus
ENSSSCG00000017155EIF4A39990.000ENSMICG00000011946-9990.000Microcebus_murinus
ENSSSCG00000017155EIF4A39997.531ENSMICG00000034467-10097.531Microcebus_murinus
ENSSSCG00000017155EIF4A310093.976ENSMICG00000009136-10093.976Microcebus_murinus
ENSSSCG00000017155EIF4A3100100.000ENSMOCG00000017297-10074.101Microtus_ochrogaster
ENSSSCG00000017155EIF4A39891.852ENSMMOG00000018352eif4a39391.852Mola_mola
ENSSSCG00000017155EIF4A310092.457ENSMODG00000003697-10092.457Monodelphis_domestica
ENSSSCG00000017155EIF4A3100100.000ENSMODG00000002190-100100.000Monodelphis_domestica
ENSSSCG00000017155EIF4A39997.291ENSMALG00000016324eif4a310097.291Monopterus_albus
ENSSSCG00000017155EIF4A310099.757MGP_CAROLIEiJ_G0017495-10099.757Mus_caroli
ENSSSCG00000017155EIF4A310097.567ENSMUSG00000107906Gm558010097.567Mus_musculus
ENSSSCG00000017155EIF4A310096.594ENSMUSG00000094973Gm899410096.594Mus_musculus
ENSSSCG00000017155EIF4A310099.513ENSMUSG00000025580Eif4a310099.513Mus_musculus
ENSSSCG00000017155EIF4A3100100.000MGP_PahariEiJ_G0018622-100100.000Mus_pahari
ENSSSCG00000017155EIF4A3100100.000MGP_SPRETEiJ_G0018339Eif4a3100100.000Mus_spretus
ENSSSCG00000017155EIF4A386100.000ENSMPUG00000012216EIF4A384100.000Mustela_putorius_furo
ENSSSCG00000017155EIF4A38784.594ENSMLUG00000024690-10084.594Myotis_lucifugus
ENSSSCG00000017155EIF4A38496.812ENSMLUG00000009585-10096.812Myotis_lucifugus
ENSSSCG00000017155EIF4A310092.701ENSMLUG00000012233-10092.701Myotis_lucifugus
ENSSSCG00000017155EIF4A3100100.000ENSNGAG00000003189-100100.000Nannospalax_galili
ENSSSCG00000017155EIF4A39897.772ENSNBRG00000021671eif4a39997.772Neolamprologus_brichardi
ENSSSCG00000017155EIF4A310099.757ENSNLEG00000015595EIF4A310099.757Nomascus_leucogenys
ENSSSCG00000017155EIF4A310088.808ENSMEUG00000008521EIF4A310088.808Notamacropus_eugenii
ENSSSCG00000017155EIF4A3100100.000ENSODEG00000010300EIF4A3100100.000Octodon_degus
ENSSSCG00000017155EIF4A39897.772ENSONIG00000019828eif4a39997.772Oreochromis_niloticus
ENSSSCG00000017155EIF4A37095.105ENSOANG00000000334EIF4A310095.105Ornithorhynchus_anatinus
ENSSSCG00000017155EIF4A39997.783ENSORLG00000018405eif4a310097.783Oryzias_latipes
ENSSSCG00000017155EIF4A39997.783ENSOMEG00000007998eif4a310097.783Oryzias_melastigma
ENSSSCG00000017155EIF4A310099.513ENSOGAG00000026206-10099.513Otolemur_garnettii
ENSSSCG00000017155EIF4A3100100.000ENSOGAG00000007495-100100.000Otolemur_garnettii
ENSSSCG00000017155EIF4A3100100.000ENSOARG00000002169-100100.000Ovis_aries
ENSSSCG00000017155EIF4A310096.350ENSOARG00000005144-10096.350Ovis_aries
ENSSSCG00000017155EIF4A38193.093ENSPPAG00000021017-8992.771Pan_paniscus
ENSSSCG00000017155EIF4A3100100.000ENSPPRG00000021873EIF4A3100100.000Panthera_pardus
ENSSSCG00000017155EIF4A38898.611ENSPTIG00000009646EIF4A39998.611Panthera_tigris_altaica
ENSSSCG00000017155EIF4A310097.330ENSPTRG00000009737EIF4A310097.330Pan_troglodytes
ENSSSCG00000017155EIF4A310090.511ENSPANG00000021217-10090.511Papio_anubis
ENSSSCG00000017155EIF4A310099.757ENSPANG00000019672-10099.757Papio_anubis
ENSSSCG00000017155EIF4A39896.782ENSPKIG00000016912eif4a39996.782Paramormyrops_kingsleyae
ENSSSCG00000017155EIF4A368100.000ENSPSIG00000004036EIF4A3100100.000Pelodiscus_sinensis
ENSSSCG00000017155EIF4A3100100.000ENSPEMG00000009441-100100.000Peromyscus_maniculatus_bairdii
ENSSSCG00000017155EIF4A38799.440ENSPCIG00000005856-98100.000Phascolarctos_cinereus
ENSSSCG00000017155EIF4A39997.543ENSPFOG00000009300eif4a39897.543Poecilia_formosa
ENSSSCG00000017155EIF4A39997.783ENSPLAG00000007436eif4a310097.783Poecilia_latipinna
ENSSSCG00000017155EIF4A39997.783ENSPMEG00000008078eif4a310097.783Poecilia_mexicana
ENSSSCG00000017155EIF4A39998.030ENSPREG00000006006eif4a310098.030Poecilia_reticulata
ENSSSCG00000017155EIF4A310099.757ENSPPYG00000008714EIF4A310099.757Pongo_abelii
ENSSSCG00000017155EIF4A39884.080ENSPCAG00000002931EIF4A310084.185Procavia_capensis
ENSSSCG00000017155EIF4A3100100.000ENSPCOG00000020004EIF4A3100100.000Propithecus_coquereli
ENSSSCG00000017155EIF4A3100100.000ENSPVAG00000003627EIF4A3100100.000Pteropus_vampyrus
ENSSSCG00000017155EIF4A39997.537ENSPNYG00000016865eif4a310097.537Pundamilia_nyererei
ENSSSCG00000017155EIF4A39897.030ENSPNAG00000008053eif4a39997.030Pygocentrus_nattereri
ENSSSCG00000017155EIF4A3100100.000ENSRNOG00000045791Eif4a3100100.000Rattus_norvegicus
ENSSSCG00000017155EIF4A310099.757ENSRBIG00000029705EIF4A310099.757Rhinopithecus_bieti
ENSSSCG00000017155EIF4A310099.757ENSRROG00000042322EIF4A310099.757Rhinopithecus_roxellana
ENSSSCG00000017155EIF4A39164.516YJL138CTIF29464.516Saccharomyces_cerevisiae
ENSSSCG00000017155EIF4A39164.516YKR059WTIF19464.516Saccharomyces_cerevisiae
ENSSSCG00000017155EIF4A39561.772YDR021W-9961.772Saccharomyces_cerevisiae
ENSSSCG00000017155EIF4A3100100.000ENSSBOG00000024694EIF4A3100100.000Saimiri_boliviensis_boliviensis
ENSSSCG00000017155EIF4A310099.027ENSSHAG00000005751-10099.027Sarcophilus_harrisii
ENSSSCG00000017155EIF4A310099.270ENSSHAG00000004638-9299.270Sarcophilus_harrisii
ENSSSCG00000017155EIF4A39897.030ENSSFOG00015004896-9997.030Scleropages_formosus
ENSSSCG00000017155EIF4A39896.782ENSSFOG00015022017eif4a39996.782Scleropages_formosus
ENSSSCG00000017155EIF4A39897.525ENSSMAG00000021078eif4a39997.525Scophthalmus_maximus
ENSSSCG00000017155EIF4A310097.080ENSSDUG00000021512eif4a310097.080Seriola_dumerili
ENSSSCG00000017155EIF4A39096.206ENSSLDG00000010112eif4a39396.206Seriola_lalandi_dorsalis
ENSSSCG00000017155EIF4A355100.000ENSSARG00000009017-100100.000Sorex_araneus
ENSSSCG00000017155EIF4A39998.533ENSSPUG00000013935EIF4A39998.533Sphenodon_punctatus
ENSSSCG00000017155EIF4A39797.756ENSSPAG00000017012eif4a39897.756Stegastes_partitus
ENSSSCG00000017155EIF4A380100.000ENSTGUG00000002132EIF4A3100100.000Taeniopygia_guttata
ENSSSCG00000017155EIF4A39997.537ENSTRUG00000011543eif4a310097.537Takifugu_rubripes
ENSSSCG00000017155EIF4A39997.304ENSTNIG00000002924eif4a39997.304Tetraodon_nigroviridis
ENSSSCG00000017155EIF4A38688.983ENSTTRG00000000514EIF4A310088.983Tursiops_truncatus
ENSSSCG00000017155EIF4A3100100.000ENSUAMG00000027453EIF4A3100100.000Ursus_americanus
ENSSSCG00000017155EIF4A39393.766ENSUMAG00000014617EIF4A39999.432Ursus_maritimus
ENSSSCG00000017155EIF4A310099.757ENSVVUG00000017984EIF4A310099.757Vulpes_vulpes
ENSSSCG00000017155EIF4A310096.627ENSXETG00000013720eif4a310096.627Xenopus_tropicalis
ENSSSCG00000017155EIF4A39797.756ENSXCOG00000010824eif4a39897.756Xiphophorus_couchianus
ENSSSCG00000017155EIF4A39997.783ENSXMAG00000014111eif4a310097.783Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay-IEAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISSProcess
GO:0000398mRNA splicing, via spliceosome-ISSProcess
GO:0003729mRNA binding-IEAFunction
GO:0004004ATP-dependent RNA helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-IEAComponent
GO:0006364rRNA processing-IEAProcess
GO:0008143poly(A) binding-IEAFunction
GO:0016607nuclear speck-IEAComponent
GO:0017148negative regulation of translation-IEAProcess
GO:0035145exon-exon junction complex-IEAComponent
GO:0045727positive regulation of translation-IEAProcess
GO:0048701embryonic cranial skeleton morphogenesis-ISSProcess
GO:0051028mRNA transport-IEAProcess
GO:0071006U2-type catalytic step 1 spliceosome-ISSComponent
GO:0071013catalytic step 2 spliceosome-IEAComponent

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