EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000017357 (Gene tree)
Gene ID: 102160693
Gene Symbol: ITGA2B
Alias: GPIIB
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 101178 bases
Position: chr12:18776205-18877382
Accession: 102160693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057735	zf-C2H2_jaz	PF12171.8	1.2e-06	1	1
ENSSSCP00000044651	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSSSCP00000045000	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSSSCP00000051162	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSSSCP00000041162	zf-C2H2_jaz	PF12171.8	4.3e-06	1	1
ENSSSCP00000051602	zf-C2H2_jaz	PF12171.8	4.7e-06	1	1
ENSSSCP00000041162	G-patch	PF01585.23	1.3e-12	1	1
ENSSSCP00000051602	G-patch	PF01585.23	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059737	-	6938	XM_021066862	ENSSSCP00000044651	1429 (aa)	XP_020922521	A0A287B4X4
ENSSSCT00000055688	-	3807	-	ENSSSCP00000057735	1103 (aa)	-	A0A287BMK9
ENSSSCT00000060096	-	8560	-	ENSSSCP00000051162	1429 (aa)	-	A0A287B4X4
ENSSSCT00000049609	-	6352	XM_021066864	ENSSSCP00000045000	1429 (aa)	XP_020922523	A0A287B4X4
ENSSSCT00000040262	-	5548	-	ENSSSCP00000034410	1293 (aa)	-	A0A286ZSG8
ENSSSCT00000043412	-	7114	XM_021066861	ENSSSCP00000051602	1645 (aa)	XP_020922520	A0A287B540
ENSSSCT00000048102	-	6528	-	ENSSSCP00000041162	1536 (aa)	-	A0A287AB92
ENSSSCT00000018895	-	3326	-	ENSSSCP00000018391	1036 (aa)	-	F1RQY8

Gene Model

Click here to download ENSSSCG00000017357's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04015	Rap1 signaling pathway	KEGG
ssc04151	PI3K-Akt signaling pathway	KEGG
ssc04510	Focal adhesion	KEGG
ssc04512	ECM-receptor interaction	KEGG
ssc04611	Platelet activation	KEGG
ssc04640	Hematopoietic cell lineage	KEGG
ssc04810	Regulation of actin cytoskeleton	KEGG
ssc05165	Human papillomavirus infection	KEGG
ssc05200	Pathways in cancer	KEGG
ssc05222	Small cell lung cancer	KEGG
ssc05410	Hypertrophic cardiomyopathy (HCM)	KEGG
ssc05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG
ssc05414	Dilated cardiomyopathy (DCM)	KEGG
ssc05418	Fluid shear stress and atherosclerosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017357	ITGA2B	100	92.039	ENSG00000186566	GPATCH8	100	93.179	Homo_sapiens
ENSSSCG00000017357	ITGA2B	100	93.012	ENSAMEG00000018376	GPATCH8	100	93.572	Ailuropoda_melanoleuca
ENSSSCG00000017357	ITGA2B	50	65.091	ENSAPLG00000003095	GPATCH8	55	64.833	Anas_platyrhynchos
ENSSSCG00000017357	ITGA2B	100	62.268	ENSACAG00000012522	GPATCH8	55	54.018	Anolis_carolinensis
ENSSSCG00000017357	ITGA2B	100	91.271	ENSANAG00000032773	GPATCH8	100	92.517	Aotus_nancymaae
ENSSSCG00000017357	ITGA2B	100	94.829	ENSBTAG00000038316	GPATCH8	100	95.096	Bos_taurus
ENSSSCG00000017357	ITGA2B	100	90.712	ENSCJAG00000009807	GPATCH8	100	91.987	Callithrix_jacchus
ENSSSCG00000017357	ITGA2B	100	93.431	ENSCAFG00000014136	GPATCH8	100	94.433	Canis_familiaris
ENSSSCG00000017357	ITGA2B	100	93.431	ENSCAFG00020009830	GPATCH8	99	94.385	Canis_lupus_dingo
ENSSSCG00000017357	ITGA2B	100	94.060	ENSCHIG00000008962	GPATCH8	99	92.644	Capra_hircus
ENSSSCG00000017357	ITGA2B	100	83.927	ENSTSYG00000033153	GPATCH8	100	85.487	Carlito_syrichta
ENSSSCG00000017357	ITGA2B	100	75.881	ENSCPOG00000039068	GPATCH8	53	69.770	Cavia_porcellus
ENSSSCG00000017357	ITGA2B	100	91.201	ENSCCAG00000030686	GPATCH8	100	92.384	Cebus_capucinus
ENSSSCG00000017357	ITGA2B	100	91.760	ENSCATG00000028156	GPATCH8	100	92.980	Cercocebus_atys
ENSSSCG00000017357	ITGA2B	100	91.480	ENSCSAG00000003586	GPATCH8	100	92.715	Chlorocebus_sabaeus
ENSSSCG00000017357	ITGA2B	98	91.538	ENSCPBG00000008955	GPATCH8	55	63.925	Chrysemys_picta_bellii
ENSSSCG00000017357	ITGA2B	100	91.690	ENSCANG00000039731	GPATCH8	100	92.848	Colobus_angolensis_palliatus
ENSSSCG00000017357	ITGA2B	100	89.378	ENSCGRG00001020210	Gpatch8	100	89.795	Cricetulus_griseus_chok1gshd
ENSSSCG00000017357	ITGA2B	100	89.378	ENSCGRG00000017090	Gpatch8	100	89.795	Cricetulus_griseus_crigri
ENSSSCG00000017357	ITGA2B	100	91.043	ENSDNOG00000005102	GPATCH8	100	90.716	Dasypus_novemcinctus
ENSSSCG00000017357	ITGA2B	100	91.207	ENSDORG00000027664	Gpatch8	100	90.404	Dipodomys_ordii
ENSSSCG00000017357	ITGA2B	99	87.183	ENSETEG00000001325	GPATCH8	100	86.795	Echinops_telfairi
ENSSSCG00000017357	ITGA2B	69	43.797	ENSEBUG00000005749	gpatch8	75	47.611	Eptatretus_burgeri
ENSSSCG00000017357	ITGA2B	100	94.822	ENSEASG00005010264	GPATCH8	97	93.342	Equus_asinus_asinus
ENSSSCG00000017357	ITGA2B	100	95.117	ENSECAG00000040232	GPATCH8	99	95.016	Equus_caballus
ENSSSCG00000017357	ITGA2B	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSSSCG00000017357	ITGA2B	50	93.494	ENSFCAG00000043334	GPATCH8	56	93.541	Felis_catus
ENSSSCG00000017357	ITGA2B	100	65.220	ENSFALG00000009554	GPATCH8	55	63.909	Ficedula_albicollis
ENSSSCG00000017357	ITGA2B	100	65.350	ENSGALG00000041556	GPATCH8	54	63.703	Gallus_gallus
ENSSSCG00000017357	ITGA2B	100	65.597	ENSGAGG00000008358	GPATCH8	55	63.958	Gopherus_agassizii
ENSSSCG00000017357	ITGA2B	100	89.944	ENSGGOG00000013860	GPATCH8	100	91.060	Gorilla_gorilla
ENSSSCG00000017357	ITGA2B	100	75.209	ENSHGLG00000017687	GPATCH8	55	71.241	Heterocephalus_glaber_female
ENSSSCG00000017357	ITGA2B	76	74.290	ENSHGLG00100010738	GPATCH8	99	77.851	Heterocephalus_glaber_male
ENSSSCG00000017357	ITGA2B	100	91.614	ENSSTOG00000025022	GPATCH8	100	92.180	Ictidomys_tridecemlineatus
ENSSSCG00000017357	ITGA2B	100	88.408	ENSJJAG00000017797	Gpatch8	100	89.139	Jaculus_jaculus
ENSSSCG00000017357	ITGA2B	52	55.980	ENSLACG00000017530	GPATCH8	51	57.362	Latimeria_chalumnae
ENSSSCG00000017357	ITGA2B	85	89.439	ENSLAFG00000032250	GPATCH8	100	90.838	Loxodonta_africana
ENSSSCG00000017357	ITGA2B	100	91.760	ENSMFAG00000039126	GPATCH8	100	92.980	Macaca_fascicularis
ENSSSCG00000017357	ITGA2B	100	92.268	ENSMMUG00000012658	GPATCH8	100	93.047	Macaca_mulatta
ENSSSCG00000017357	ITGA2B	100	91.690	ENSMNEG00000031426	GPATCH8	100	92.914	Macaca_nemestrina
ENSSSCG00000017357	ITGA2B	100	91.760	ENSMLEG00000038860	GPATCH8	100	92.980	Mandrillus_leucophaeus
ENSSSCG00000017357	ITGA2B	100	89.518	ENSMAUG00000021770	Gpatch8	100	89.596	Mesocricetus_auratus
ENSSSCG00000017357	ITGA2B	100	92.103	ENSMICG00000028586	GPATCH8	100	91.650	Microcebus_murinus
ENSSSCG00000017357	ITGA2B	100	88.223	ENSMOCG00000001658	Gpatch8	100	88.896	Microtus_ochrogaster
ENSSSCG00000017357	ITGA2B	100	81.167	ENSMODG00000011442	GPATCH8	100	80.026	Monodelphis_domestica
ENSSSCG00000017357	ITGA2B	100	89.121	MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.352	Mus_caroli
ENSSSCG00000017357	ITGA2B	100	89.532	ENSMUSG00000034621	Gpatch8	100	89.477	Mus_musculus
ENSSSCG00000017357	ITGA2B	100	89.152	MGP_PahariEiJ_G0018385	Gpatch8	100	89.050	Mus_pahari
ENSSSCG00000017357	ITGA2B	100	89.152	MGP_SPRETEiJ_G0018098	Gpatch8	100	89.050	Mus_spretus
ENSSSCG00000017357	ITGA2B	100	92.732	ENSMPUG00000009274	GPATCH8	100	93.903	Mustela_putorius_furo
ENSSSCG00000017357	ITGA2B	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.918	Myotis_lucifugus
ENSSSCG00000017357	ITGA2B	100	90.370	ENSNGAG00000021860	Gpatch8	100	89.940	Nannospalax_galili
ENSSSCG00000017357	ITGA2B	76	77.909	ENSMEUG00000011799	GPATCH8	100	77.929	Notamacropus_eugenii
ENSSSCG00000017357	ITGA2B	99	84.388	ENSOPRG00000008816	GPATCH8	97	85.948	Ochotona_princeps
ENSSSCG00000017357	ITGA2B	100	89.867	ENSOCUG00000003291	GPATCH8	100	90.855	Oryctolagus_cuniculus
ENSSSCG00000017357	ITGA2B	100	91.824	ENSOGAG00000033643	GPATCH8	100	91.150	Otolemur_garnettii
ENSSSCG00000017357	ITGA2B	100	88.050	ENSOARG00000008370	GPATCH8	100	88.999	Ovis_aries
ENSSSCG00000017357	ITGA2B	100	91.830	ENSPPAG00000040523	GPATCH8	100	92.914	Pan_paniscus
ENSSSCG00000017357	ITGA2B	100	93.291	ENSPPRG00000023310	GPATCH8	100	94.301	Panthera_pardus
ENSSSCG00000017357	ITGA2B	100	91.474	ENSPTIG00000020001	GPATCH8	100	92.379	Panthera_tigris_altaica
ENSSSCG00000017357	ITGA2B	100	91.830	ENSPTRG00000009278	GPATCH8	100	92.980	Pan_troglodytes
ENSSSCG00000017357	ITGA2B	100	91.690	ENSPANG00000021304	GPATCH8	100	92.914	Papio_anubis
ENSSSCG00000017357	ITGA2B	100	88.609	ENSPEMG00000008337	Gpatch8	100	88.734	Peromyscus_maniculatus_bairdii
ENSSSCG00000017357	ITGA2B	100	81.224	ENSPCIG00000019927	GPATCH8	100	78.790	Phascolarctos_cinereus
ENSSSCG00000017357	ITGA2B	100	90.852	ENSPPYG00000008329	GPATCH8	100	92.053	Pongo_abelii
ENSSSCG00000017357	ITGA2B	76	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSSSCG00000017357	ITGA2B	100	91.544	ENSPCOG00000019209	GPATCH8	100	89.596	Propithecus_coquereli
ENSSSCG00000017357	ITGA2B	100	91.474	ENSPVAG00000003155	GPATCH8	100	91.054	Pteropus_vampyrus
ENSSSCG00000017357	ITGA2B	100	87.179	ENSRNOG00000021044	Gpatch8	100	87.508	Rattus_norvegicus
ENSSSCG00000017357	ITGA2B	100	91.830	ENSRBIG00000033713	GPATCH8	100	92.980	Rhinopithecus_bieti
ENSSSCG00000017357	ITGA2B	100	91.830	ENSRROG00000029623	GPATCH8	100	92.980	Rhinopithecus_roxellana
ENSSSCG00000017357	ITGA2B	100	91.201	ENSSBOG00000023544	GPATCH8	100	92.384	Saimiri_boliviensis_boliviensis
ENSSSCG00000017357	ITGA2B	100	81.015	ENSSHAG00000016140	GPATCH8	100	79.617	Sarcophilus_harrisii
ENSSSCG00000017357	ITGA2B	100	87.997	ENSSARG00000007516	GPATCH8	100	89.080	Sorex_araneus
ENSSSCG00000017357	ITGA2B	91	97.826	ENSTBEG00000009486	GPATCH8	91	97.826	Tupaia_belangeri
ENSSSCG00000017357	ITGA2B	100	90.846	ENSTTRG00000010527	GPATCH8	100	91.365	Tursiops_truncatus
ENSSSCG00000017357	ITGA2B	100	90.566	ENSUMAG00000013891	GPATCH8	100	89.658	Ursus_maritimus
ENSSSCG00000017357	ITGA2B	90	92.719	ENSVPAG00000006937	GPATCH8	99	92.972	Vicugna_pacos
ENSSSCG00000017357	ITGA2B	100	93.291	ENSVVUG00000017996	GPATCH8	100	94.235	Vulpes_vulpes