EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000017514 (Gene tree)
Gene ID: 100518449
Gene Symbol: KPNB1
Alias: IMB1|IPO1|IPOB|Impnb|MGC2155|MGC2156|MGC2157|NTF97
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 30166 bases
Position: chr12:23915911-23946076
Accession: 100518449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000018562	IBN_N	PF03810.19	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000019068	KPNB1-201	6728	XM_003131528	ENSSSCP00000018562	876 (aa)	XP_003131576	F1RWJ5

Gene Model

Click here to download ENSSSCG00000017514's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017514	KPNB1	100	99.201	ENSG00000108424	KPNB1	100	100.000	Homo_sapiens
ENSSSCG00000017514	KPNB1	100	93.265	ENSAPOG00000020572	kpnb1	100	93.265	Acanthochromis_polyacanthus
ENSSSCG00000017514	KPNB1	96	99.526	ENSAMEG00000004613	KPNB1	100	99.526	Ailuropoda_melanoleuca
ENSSSCG00000017514	KPNB1	98	93.107	ENSACIG00000023130	kpnb1	99	93.107	Amphilophus_citrinellus
ENSSSCG00000017514	KPNB1	100	93.265	ENSAOCG00000007048	kpnb1	100	93.265	Amphiprion_ocellaris
ENSSSCG00000017514	KPNB1	100	93.265	ENSAPEG00000008270	kpnb1	100	93.265	Amphiprion_percula
ENSSSCG00000017514	KPNB1	100	92.694	ENSATEG00000015139	kpnb1	100	92.694	Anabas_testudineus
ENSSSCG00000017514	KPNB1	99	94.863	ENSAPLG00000010177	KPNB1	100	94.863	Anas_platyrhynchos
ENSSSCG00000017514	KPNB1	100	97.260	ENSACAG00000007097	KPNB1	100	97.260	Anolis_carolinensis
ENSSSCG00000017514	KPNB1	100	96.461	ENSANAG00000024932	-	99	96.461	Aotus_nancymaae
ENSSSCG00000017514	KPNB1	100	93.151	ENSACLG00000015070	kpnb1	100	93.151	Astatotilapia_calliptera
ENSSSCG00000017514	KPNB1	100	93.265	ENSAMXG00000041903	kpnb1	100	93.265	Astyanax_mexicanus
ENSSSCG00000017514	KPNB1	100	99.772	ENSBTAG00000006586	KPNB1	100	99.772	Bos_taurus
ENSSSCG00000017514	KPNB1	99	48.526	WBGene00002075	imb-1	98	48.416	Caenorhabditis_elegans
ENSSSCG00000017514	KPNB1	100	99.087	ENSCJAG00000007834	KPNB1	100	99.087	Callithrix_jacchus
ENSSSCG00000017514	KPNB1	100	99.772	ENSCAFG00000016678	KPNB1	100	99.772	Canis_familiaris
ENSSSCG00000017514	KPNB1	100	99.772	ENSCAFG00020023205	KPNB1	100	99.772	Canis_lupus_dingo
ENSSSCG00000017514	KPNB1	100	99.772	ENSCHIG00000014896	KPNB1	100	99.772	Capra_hircus
ENSSSCG00000017514	KPNB1	100	97.260	ENSTSYG00000014472	KPNB1	99	97.260	Carlito_syrichta
ENSSSCG00000017514	KPNB1	96	99.288	ENSCAPG00000014185	KPNB1	100	99.288	Cavia_aperea
ENSSSCG00000017514	KPNB1	100	99.315	ENSCPOG00000006566	KPNB1	100	99.315	Cavia_porcellus
ENSSSCG00000017514	KPNB1	100	92.255	ENSCCAG00000029263	-	99	92.255	Cebus_capucinus
ENSSSCG00000017514	KPNB1	100	78.694	ENSCCAG00000018551	-	100	78.694	Cebus_capucinus
ENSSSCG00000017514	KPNB1	100	99.201	ENSCATG00000037124	KPNB1	100	99.201	Cercocebus_atys
ENSSSCG00000017514	KPNB1	100	99.201	ENSCLAG00000017091	KPNB1	100	99.201	Chinchilla_lanigera
ENSSSCG00000017514	KPNB1	100	99.201	ENSCSAG00000002605	KPNB1	100	99.201	Chlorocebus_sabaeus
ENSSSCG00000017514	KPNB1	73	100.000	ENSCHOG00000010604	KPNB1	73	100.000	Choloepus_hoffmanni
ENSSSCG00000017514	KPNB1	99	98.262	ENSCPBG00000027423	KPNB1	94	98.262	Chrysemys_picta_bellii
ENSSSCG00000017514	KPNB1	99	64.538	ENSCING00000004639	-	99	64.538	Ciona_intestinalis
ENSSSCG00000017514	KPNB1	100	62.260	ENSCSAVG00000008624	-	100	62.260	Ciona_savignyi
ENSSSCG00000017514	KPNB1	96	97.093	ENSCANG00000013489	KPNB1	91	97.093	Colobus_angolensis_palliatus
ENSSSCG00000017514	KPNB1	100	99.429	ENSCGRG00001016042	Kpnb1	100	99.429	Cricetulus_griseus_chok1gshd
ENSSSCG00000017514	KPNB1	96	99.407	ENSCGRG00000013910	Kpnb1	100	99.407	Cricetulus_griseus_crigri
ENSSSCG00000017514	KPNB1	97	90.610	ENSCSEG00000007991	kpnb1	100	90.610	Cynoglossus_semilaevis
ENSSSCG00000017514	KPNB1	100	92.580	ENSDARG00000104889	kpnb1	100	92.580	Danio_rerio
ENSSSCG00000017514	KPNB1	99	61.758	FBgn0262743	Fs(2)Ket	99	61.758	Drosophila_melanogaster
ENSSSCG00000017514	KPNB1	98	82.599	ENSEBUG00000013869	kpnb1	98	82.599	Eptatretus_burgeri
ENSSSCG00000017514	KPNB1	100	99.772	ENSEASG00005000805	KPNB1	100	99.772	Equus_asinus_asinus
ENSSSCG00000017514	KPNB1	100	99.772	ENSECAG00000014560	KPNB1	100	99.772	Equus_caballus
ENSSSCG00000017514	KPNB1	85	98.995	ENSEEUG00000005046	KPNB1	88	98.995	Erinaceus_europaeus
ENSSSCG00000017514	KPNB1	100	93.151	ENSELUG00000015847	kpnb1	100	93.151	Esox_lucius
ENSSSCG00000017514	KPNB1	100	99.772	ENSFCAG00000023994	KPNB1	100	99.772	Felis_catus
ENSSSCG00000017514	KPNB1	96	99.288	ENSFDAG00000019923	KPNB1	100	99.288	Fukomys_damarensis
ENSSSCG00000017514	KPNB1	100	92.580	ENSFHEG00000020199	kpnb1	100	92.580	Fundulus_heteroclitus
ENSSSCG00000017514	KPNB1	100	88.470	ENSGMOG00000011607	kpnb1	99	88.470	Gadus_morhua
ENSSSCG00000017514	KPNB1	100	97.603	ENSGALG00000036962	KPNB1	100	97.603	Gallus_gallus
ENSSSCG00000017514	KPNB1	100	92.352	ENSGAFG00000000783	kpnb1	100	92.352	Gambusia_affinis
ENSSSCG00000017514	KPNB1	100	88.814	ENSGACG00000014765	kpnb1	100	88.814	Gasterosteus_aculeatus
ENSSSCG00000017514	KPNB1	96	97.979	ENSGAGG00000023737	KPNB1	92	97.979	Gopherus_agassizii
ENSSSCG00000017514	KPNB1	100	99.201	ENSGGOG00000008089	KPNB1	100	99.201	Gorilla_gorilla
ENSSSCG00000017514	KPNB1	100	93.151	ENSHBUG00000016826	kpnb1	100	93.151	Haplochromis_burtoni
ENSSSCG00000017514	KPNB1	100	99.315	ENSHGLG00000014138	KPNB1	100	99.315	Heterocephalus_glaber_female
ENSSSCG00000017514	KPNB1	98	97.677	ENSHGLG00100006572	KPNB1	100	99.288	Heterocephalus_glaber_male
ENSSSCG00000017514	KPNB1	100	91.210	ENSHCOG00000002084	kpnb1	100	91.210	Hippocampus_comes
ENSSSCG00000017514	KPNB1	99	88.992	ENSIPUG00000012402	kpnb1	95	88.992	Ictalurus_punctatus
ENSSSCG00000017514	KPNB1	100	99.543	ENSSTOG00000007896	KPNB1	100	99.543	Ictidomys_tridecemlineatus
ENSSSCG00000017514	KPNB1	100	99.201	ENSJJAG00000010909	Kpnb1	100	99.201	Jaculus_jaculus
ENSSSCG00000017514	KPNB1	100	92.237	ENSKMAG00000001547	kpnb1	100	92.237	Kryptolebias_marmoratus
ENSSSCG00000017514	KPNB1	99	92.964	ENSLBEG00000025794	kpnb1	99	91.462	Labrus_bergylta
ENSSSCG00000017514	KPNB1	88	94.812	ENSLACG00000017620	KPNB1	99	94.812	Latimeria_chalumnae
ENSSSCG00000017514	KPNB1	100	93.950	ENSLOCG00000013753	kpnb1	100	93.950	Lepisosteus_oculatus
ENSSSCG00000017514	KPNB1	100	94.178	ENSLAFG00000001328	KPNB1	100	94.178	Loxodonta_africana
ENSSSCG00000017514	KPNB1	99	96.564	ENSMFAG00000030197	KPNB1	100	99.170	Macaca_fascicularis
ENSSSCG00000017514	KPNB1	99	97.486	ENSMMUG00000019760	KPNB1	99	97.486	Macaca_mulatta
ENSSSCG00000017514	KPNB1	100	99.201	ENSMNEG00000040927	KPNB1	100	99.201	Macaca_nemestrina
ENSSSCG00000017514	KPNB1	96	99.170	ENSMLEG00000038185	KPNB1	96	99.170	Mandrillus_leucophaeus
ENSSSCG00000017514	KPNB1	100	93.265	ENSMAMG00000011036	kpnb1	100	93.265	Mastacembelus_armatus
ENSSSCG00000017514	KPNB1	100	93.151	ENSMZEG00005004564	kpnb1	100	93.151	Maylandia_zebra
ENSSSCG00000017514	KPNB1	55	97.723	ENSMGAG00000002770	-	100	97.723	Meleagris_gallopavo
ENSSSCG00000017514	KPNB1	100	99.429	ENSMAUG00000006211	Kpnb1	100	99.429	Mesocricetus_auratus
ENSSSCG00000017514	KPNB1	100	99.543	ENSMICG00000012059	KPNB1	84	99.543	Microcebus_murinus
ENSSSCG00000017514	KPNB1	100	99.429	ENSMOCG00000003683	Kpnb1	100	99.429	Microtus_ochrogaster
ENSSSCG00000017514	KPNB1	100	98.516	ENSMODG00000012505	KPNB1	100	98.516	Monodelphis_domestica
ENSSSCG00000017514	KPNB1	100	93.379	ENSMALG00000000863	kpnb1	100	93.379	Monopterus_albus
ENSSSCG00000017514	KPNB1	94	99.270	MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	Mus_caroli
ENSSSCG00000017514	KPNB1	100	99.315	ENSMUSG00000001440	Kpnb1	100	99.315	Mus_musculus
ENSSSCG00000017514	KPNB1	100	98.746	ENSMPUG00000015220	KPNB1	100	98.746	Mustela_putorius_furo
ENSSSCG00000017514	KPNB1	100	94.198	ENSMLUG00000014522	KPNB1	100	94.198	Myotis_lucifugus
ENSSSCG00000017514	KPNB1	96	99.407	ENSNGAG00000017610	Kpnb1	100	99.407	Nannospalax_galili
ENSSSCG00000017514	KPNB1	100	93.151	ENSNBRG00000019305	kpnb1	100	93.151	Neolamprologus_brichardi
ENSSSCG00000017514	KPNB1	100	99.201	ENSNLEG00000001446	KPNB1	100	99.201	Nomascus_leucogenys
ENSSSCG00000017514	KPNB1	100	92.922	ENSMEUG00000014284	KPNB1	100	92.922	Notamacropus_eugenii
ENSSSCG00000017514	KPNB1	100	98.973	ENSODEG00000017287	KPNB1	100	98.973	Octodon_degus
ENSSSCG00000017514	KPNB1	100	93.265	ENSONIG00000009269	kpnb1	100	93.265	Oreochromis_niloticus
ENSSSCG00000017514	KPNB1	100	99.315	ENSOCUG00000015425	KPNB1	100	99.315	Oryctolagus_cuniculus
ENSSSCG00000017514	KPNB1	100	93.151	ENSORLG00000019936	kpnb1	100	93.151	Oryzias_latipes
ENSSSCG00000017514	KPNB1	100	93.151	ENSORLG00020021181	kpnb1	100	93.151	Oryzias_latipes_hni
ENSSSCG00000017514	KPNB1	100	93.037	ENSORLG00015012177	kpnb1	100	93.037	Oryzias_latipes_hsok
ENSSSCG00000017514	KPNB1	100	93.265	ENSOMEG00000021022	kpnb1	100	93.265	Oryzias_melastigma
ENSSSCG00000017514	KPNB1	100	99.658	ENSOGAG00000006153	KPNB1	100	99.658	Otolemur_garnettii
ENSSSCG00000017514	KPNB1	97	98.712	ENSOARG00000008469	KPNB1	99	98.712	Ovis_aries
ENSSSCG00000017514	KPNB1	100	99.201	ENSPPAG00000028842	KPNB1	100	99.201	Pan_paniscus
ENSSSCG00000017514	KPNB1	99	97.130	ENSPPRG00000022879	KPNB1	99	97.130	Panthera_pardus
ENSSSCG00000017514	KPNB1	99	97.130	ENSPTIG00000006870	KPNB1	99	97.130	Panthera_tigris_altaica
ENSSSCG00000017514	KPNB1	100	99.201	ENSPTRG00000009333	KPNB1	100	99.201	Pan_troglodytes
ENSSSCG00000017514	KPNB1	100	99.201	ENSPANG00000022099	KPNB1	100	99.201	Papio_anubis
ENSSSCG00000017514	KPNB1	100	93.265	ENSPKIG00000017563	kpnb1	100	93.265	Paramormyrops_kingsleyae
ENSSSCG00000017514	KPNB1	96	98.458	ENSPSIG00000009775	KPNB1	100	98.458	Pelodiscus_sinensis
ENSSSCG00000017514	KPNB1	100	88.483	ENSPMGG00000001041	kpnb1	93	88.483	Periophthalmus_magnuspinnatus
ENSSSCG00000017514	KPNB1	100	99.429	ENSPEMG00000017783	Kpnb1	100	99.429	Peromyscus_maniculatus_bairdii
ENSSSCG00000017514	KPNB1	99	86.560	ENSPMAG00000007117	kpnb1	99	86.560	Petromyzon_marinus
ENSSSCG00000017514	KPNB1	100	98.516	ENSPCIG00000001034	KPNB1	100	98.516	Phascolarctos_cinereus
ENSSSCG00000017514	KPNB1	100	92.352	ENSPFOG00000009014	kpnb1	100	92.352	Poecilia_formosa
ENSSSCG00000017514	KPNB1	100	92.352	ENSPLAG00000010922	kpnb1	100	92.352	Poecilia_latipinna
ENSSSCG00000017514	KPNB1	100	92.352	ENSPREG00000012268	kpnb1	100	92.352	Poecilia_reticulata
ENSSSCG00000017514	KPNB1	100	98.744	ENSPPYG00000025935	KPNB1	100	98.744	Pongo_abelii
ENSSSCG00000017514	KPNB1	75	82.667	ENSPCAG00000002526	KPNB1	78	82.667	Procavia_capensis
ENSSSCG00000017514	KPNB1	100	99.543	ENSPCOG00000026259	KPNB1	100	99.543	Propithecus_coquereli
ENSSSCG00000017514	KPNB1	100	99.315	ENSPVAG00000004910	KPNB1	100	99.315	Pteropus_vampyrus
ENSSSCG00000017514	KPNB1	100	88.974	ENSPNYG00000017703	kpnb1	96	93.878	Pundamilia_nyererei
ENSSSCG00000017514	KPNB1	99	84.994	ENSPNAG00000024047	kpnb1	98	84.994	Pygocentrus_nattereri
ENSSSCG00000017514	KPNB1	100	99.315	ENSRNOG00000009275	Kpnb1	100	99.315	Rattus_norvegicus
ENSSSCG00000017514	KPNB1	100	98.973	ENSRBIG00000002254	KPNB1	99	98.973	Rhinopithecus_bieti
ENSSSCG00000017514	KPNB1	99	98.730	ENSRROG00000030419	KPNB1	99	98.730	Rhinopithecus_roxellana
ENSSSCG00000017514	KPNB1	99	34.130	YLR347C	KAP95	99	34.016	Saccharomyces_cerevisiae
ENSSSCG00000017514	KPNB1	100	99.201	ENSSBOG00000030025	KPNB1	94	99.201	Saimiri_boliviensis_boliviensis
ENSSSCG00000017514	KPNB1	96	98.229	ENSSHAG00000018214	KPNB1	100	98.229	Sarcophilus_harrisii
ENSSSCG00000017514	KPNB1	100	93.950	ENSSFOG00015020000	kpnb1	100	93.950	Scleropages_formosus
ENSSSCG00000017514	KPNB1	100	93.493	ENSSDUG00000016218	kpnb1	100	93.493	Seriola_dumerili
ENSSSCG00000017514	KPNB1	98	93.473	ENSSLDG00000021549	kpnb1	97	93.473	Seriola_lalandi_dorsalis
ENSSSCG00000017514	KPNB1	100	97.603	ENSSPUG00000017799	KPNB1	100	97.603	Sphenodon_punctatus
ENSSSCG00000017514	KPNB1	100	93.265	ENSSPAG00000019346	kpnb1	100	93.265	Stegastes_partitus
ENSSSCG00000017514	KPNB1	96	93.001	ENSTGUG00000003387	KPNB1	100	93.001	Taeniopygia_guttata
ENSSSCG00000017514	KPNB1	100	90.639	ENSTRUG00000000542	kpnb1	100	90.639	Takifugu_rubripes
ENSSSCG00000017514	KPNB1	100	90.868	ENSTNIG00000006494	kpnb1	100	90.868	Tetraodon_nigroviridis
ENSSSCG00000017514	KPNB1	96	99.644	ENSTTRG00000004682	KPNB1	100	99.644	Tursiops_truncatus
ENSSSCG00000017514	KPNB1	100	99.772	ENSUAMG00000025344	KPNB1	99	99.772	Ursus_americanus
ENSSSCG00000017514	KPNB1	98	98.488	ENSUMAG00000016471	KPNB1	98	98.488	Ursus_maritimus
ENSSSCG00000017514	KPNB1	100	85.046	ENSVPAG00000003675	KPNB1	100	85.046	Vicugna_pacos
ENSSSCG00000017514	KPNB1	100	99.772	ENSVVUG00000003085	KPNB1	100	99.772	Vulpes_vulpes
ENSSSCG00000017514	KPNB1	100	95.091	ENSXETG00000014717	kpnb1	100	95.091	Xenopus_tropicalis
ENSSSCG00000017514	KPNB1	100	92.466	ENSXMAG00000018792	kpnb1	100	92.466	Xiphophorus_maculatus