EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000017574 (Gene tree)
Gene ID: 100625662
Gene Symbol: -
Alias: -
Full Name: RAD52 motif-containing protein 1-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 14495 bases
Position: chrAEMK02000597.1:5899-20393
Accession: 100625662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043662	RRM_1	PF00076.22	2.8e-07	1	1
ENSSSCP00000018626	RRM_1	PF00076.22	3.3e-07	1	1
ENSSSCP00000048793	RRM_1	PF00076.22	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049014	-	681	-	ENSSSCP00000043662	226 (aa)	-	A0A287AHZ8
ENSSSCT00000049072	-	702	-	ENSSSCP00000048793	233 (aa)	-	A0A287AXC4
ENSSSCT00000019132	-	690	XM_021082322	ENSSSCP00000018626	229 (aa)	XP_020937981	F1RT75

Gene Model

Click here to download ENSSSCG00000017574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017574	-	93	72.768	ENSG00000278023	RDM1	82	83.036	Homo_sapiens
ENSSSCG00000017574	-	70	32.749	ENSAPOG00000021886	zgc:103564	66	33.140	Acanthochromis_polyacanthus
ENSSSCG00000017574	-	90	33.971	ENSAPEG00000008929	zgc:103564	80	33.971	Amphiprion_percula
ENSSSCG00000017574	-	92	44.167	ENSAPLG00000004384	RDM1	92	44.167	Anas_platyrhynchos
ENSSSCG00000017574	-	90	41.014	ENSACAG00000012989	-	88	38.683	Anolis_carolinensis
ENSSSCG00000017574	-	93	70.404	ENSANAG00000032752	RDM1	80	80.180	Aotus_nancymaae
ENSSSCG00000017574	-	94	75.771	ENSBTAG00000000030	RDM1	85	70.954	Bos_taurus
ENSSSCG00000017574	-	93	71.429	ENSCJAG00000015031	RDM1	93	70.616	Callithrix_jacchus
ENSSSCG00000017574	-	93	65.351	ENSCAFG00000015160	-	89	65.351	Canis_familiaris
ENSSSCG00000017574	-	94	78.319	ENSCHIG00000020607	RDM1	80	78.319	Capra_hircus
ENSSSCG00000017574	-	94	61.947	ENSCPOG00000001495	-	79	61.947	Cavia_porcellus
ENSSSCG00000017574	-	93	70.536	ENSCCAG00000035763	RDM1	81	78.571	Cebus_capucinus
ENSSSCG00000017574	-	93	72.768	ENSCATG00000044451	RDM1	81	81.250	Cercocebus_atys
ENSSSCG00000017574	-	90	68.372	ENSCSAG00000006209	RDM1	90	64.706	Chlorocebus_sabaeus
ENSSSCG00000017574	-	85	48.276	ENSCPBG00000009105	RDM1	91	45.378	Chrysemys_picta_bellii
ENSSSCG00000017574	-	93	72.197	ENSCANG00000041322	RDM1	97	64.957	Colobus_angolensis_palliatus
ENSSSCG00000017574	-	94	65.766	ENSCGRG00001015927	Rdm1	79	65.766	Cricetulus_griseus_chok1gshd
ENSSSCG00000017574	-	90	30.734	ENSCVAG00000001956	zgc:103564	85	30.769	Cyprinodon_variegatus
ENSSSCG00000017574	-	93	67.083	ENSDNOG00000045224	-	89	67.083	Dasypus_novemcinctus
ENSSSCG00000017574	-	79	68.557	ENSEASG00005010554	RDM1	69	68.557	Equus_asinus_asinus
ENSSSCG00000017574	-	93	72.247	ENSECAG00000022182	RDM1	81	72.247	Equus_caballus
ENSSSCG00000017574	-	93	62.917	ENSEEUG00000006127	RDM1	95	62.917	Erinaceus_europaeus
ENSSSCG00000017574	-	91	73.394	ENSFCAG00000043429	RDM1	95	71.500	Felis_catus
ENSSSCG00000017574	-	94	50.667	ENSGALG00000000243	RDM1	87	44.490	Gallus_gallus
ENSSSCG00000017574	-	90	46.729	ENSGAGG00000000293	-	76	45.417	Gopherus_agassizii
ENSSSCG00000017574	-	93	73.214	ENSGGOG00000010584	RDM1	81	83.929	Gorilla_gorilla
ENSSSCG00000017574	-	92	30.275	ENSHCOG00000002518	-	79	30.909	Hippocampus_comes
ENSSSCG00000017574	-	93	69.643	ENSSTOG00000022491	RDM1	79	69.643	Ictidomys_tridecemlineatus
ENSSSCG00000017574	-	94	71.930	ENSLAFG00000029300	RDM1	80	71.930	Loxodonta_africana
ENSSSCG00000017574	-	93	72.321	ENSMFAG00000032968	RDM1	81	81.250	Macaca_fascicularis
ENSSSCG00000017574	-	93	72.768	ENSMMUG00000006847	RDM1	87	72.642	Macaca_mulatta
ENSSSCG00000017574	-	93	72.321	ENSMNEG00000039977	RDM1	81	81.250	Macaca_nemestrina
ENSSSCG00000017574	-	93	72.321	ENSMLEG00000041158	RDM1	87	72.642	Mandrillus_leucophaeus
ENSSSCG00000017574	-	95	44.898	ENSMGAG00000008774	RDM1	96	44.898	Meleagris_gallopavo
ENSSSCG00000017574	-	94	65.766	ENSMAUG00000018559	Rdm1	87	58.607	Mesocricetus_auratus
ENSSSCG00000017574	-	93	74.107	ENSMICG00000038651	RDM1	89	73.333	Microcebus_murinus
ENSSSCG00000017574	-	98	62.661	ENSMOCG00000015095	Rdm1	86	62.661	Microtus_ochrogaster
ENSSSCG00000017574	-	94	60.619	ENSMODG00000011101	RDM1	86	56.962	Monodelphis_domestica
ENSSSCG00000017574	-	93	66.063	MGP_CAROLIEiJ_G0017226	Rdm1	87	61.475	Mus_caroli
ENSSSCG00000017574	-	93	65.158	ENSMUSG00000010362	Rdm1	87	60.246	Mus_musculus
ENSSSCG00000017574	-	93	66.368	MGP_PahariEiJ_G0018356	Rdm1	87	59.756	Mus_pahari
ENSSSCG00000017574	-	93	65.158	MGP_SPRETEiJ_G0018069	Rdm1	87	60.246	Mus_spretus
ENSSSCG00000017574	-	93	76.106	ENSMPUG00000008363	RDM1	79	76.106	Mustela_putorius_furo
ENSSSCG00000017574	-	93	73.214	ENSNLEG00000014173	RDM1	80	81.720	Nomascus_leucogenys
ENSSSCG00000017574	-	94	58.222	ENSMEUG00000015826	RDM1	90	58.222	Notamacropus_eugenii
ENSSSCG00000017574	-	93	67.111	ENSOCUG00000022704	RDM1	87	67.111	Oryctolagus_cuniculus
ENSSSCG00000017574	-	93	72.321	ENSOGAG00000011332	RDM1	79	72.321	Otolemur_garnettii
ENSSSCG00000017574	-	93	73.214	ENSPPAG00000029969	RDM1	79	73.214	Pan_paniscus
ENSSSCG00000017574	-	93	73.214	ENSPTRG00000009031	RDM1	81	83.036	Pan_troglodytes
ENSSSCG00000017574	-	93	73.214	ENSPANG00000022933	RDM1	81	82.143	Papio_anubis
ENSSSCG00000017574	-	94	64.414	ENSPEMG00000018985	Rdm1	87	59.259	Peromyscus_maniculatus_bairdii
ENSSSCG00000017574	-	93	71.429	ENSPPYG00000008198	RDM1	79	71.429	Pongo_abelii
ENSSSCG00000017574	-	94	73.451	ENSPCOG00000017995	RDM1	82	78.070	Propithecus_coquereli
ENSSSCG00000017574	-	93	78.125	ENSPVAG00000001116	RDM1	89	78.125	Pteropus_vampyrus
ENSSSCG00000017574	-	93	66.516	ENSRNOG00000020751	Rdm1	87	60.246	Rattus_norvegicus
ENSSSCG00000017574	-	93	70.982	ENSRBIG00000030000	RDM1	88	73.171	Rhinopithecus_bieti
ENSSSCG00000017574	-	93	70.982	ENSRROG00000035242	RDM1	87	72.642	Rhinopithecus_roxellana
ENSSSCG00000017574	-	94	61.504	ENSSHAG00000013584	RDM1	82	61.504	Sarcophilus_harrisii
ENSSSCG00000017574	-	93	46.396	ENSSPUG00000010941	RDM1	85	42.241	Sphenodon_punctatus
ENSSSCG00000017574	-	90	32.127	ENSSPAG00000011690	-	84	30.603	Stegastes_partitus
ENSSSCG00000017574	-	94	47.934	ENSTBEG00000010030	RDM1	96	47.934	Tupaia_belangeri
ENSSSCG00000017574	-	93	75.893	ENSUAMG00000027279	RDM1	85	70.417	Ursus_americanus
ENSSSCG00000017574	-	93	75.893	ENSUMAG00000015423	RDM1	83	70.417	Ursus_maritimus