EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000017769 (Gene tree)
Gene ID: 100144491
Gene Symbol: RAB34
Alias: NARR|RAB39|RAH
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 6644 bases
Position: chr12:44949476-44956119
Accession: 100144491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000018828	MMR_HSR1	PF01926.23	2.3e-06	1	1
ENSSSCP00000044138	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045497	RAB34-201	3796	XM_013989962	ENSSSCP00000044138	259 (aa)	XP_013845416	Q06AU4
ENSSSCT00000019341	RAB34-202	2177	XM_013989963	ENSSSCP00000018828	259 (aa)	XP_013845417	Q06AU4

Gene Model

Click here to download ENSSSCG00000017769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000017769	RAB34	62	39.752	ENSSSCG00000014828	RAB6A	76	39.752
ENSSSCG00000017769	RAB34	62	31.875	ENSSSCG00000037653	RAB5A	73	31.875
ENSSSCG00000017769	RAB34	62	35.000	ENSSSCG00000014900	RAB30	77	35.000
ENSSSCG00000017769	RAB34	79	36.058	ENSSSCG00000012954	RAB1B	86	40.373
ENSSSCG00000017769	RAB34	64	33.939	ENSSSCG00000006232	RAB2A	80	34.416
ENSSSCG00000017769	RAB34	62	34.375	ENSSSCG00000029544	RAB2B	78	34.416
ENSSSCG00000017769	RAB34	63	36.145	ENSSSCG00000038026	RAB12	66	36.145
ENSSSCG00000017769	RAB34	62	38.509	ENSSSCG00000036503	RAB6B	76	38.509
ENSSSCG00000017769	RAB34	62	40.373	ENSSSCG00000008359	RAB1A	80	40.373
ENSSSCG00000017769	RAB34	62	32.500	ENSSSCG00000007513	RAB22A	81	32.500
ENSSSCG00000017769	RAB34	73	38.947	ENSSSCG00000006564	-	88	38.947
ENSSSCG00000017769	RAB34	64	37.126	ENSSSCG00000005514	RAB14	76	37.126
ENSSSCG00000017769	RAB34	74	36.364	ENSSSCG00000012658	RAB33A	70	36.364
ENSSSCG00000017769	RAB34	60	35.000	ENSSSCG00000013600	RAB11B	70	35.000
ENSSSCG00000017769	RAB34	62	38.509	ENSSSCG00000029539	RAB23	76	38.509
ENSSSCG00000017769	RAB34	93	58.607	ENSSSCG00000010048	RAB36	92	58.607
ENSSSCG00000017769	RAB34	64	35.928	ENSSSCG00000002280	RAB15	77	35.928
ENSSSCG00000017769	RAB34	60	36.943	ENSSSCG00000024233	RAB39B	73	36.943
ENSSSCG00000017769	RAB34	79	37.073	ENSSSCG00000033876	RAB35	96	37.073
ENSSSCG00000017769	RAB34	62	31.250	ENSSSCG00000032467	RAB5C	73	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017769	RAB34	100	96.525	ENSG00000109113	RAB34	100	97.987	Homo_sapiens
ENSSSCG00000017769	RAB34	99	77.907	ENSAPOG00000003165	rab34a	97	77.907	Acanthochromis_polyacanthus
ENSSSCG00000017769	RAB34	100	95.367	ENSAMEG00000004697	RAB34	82	95.367	Ailuropoda_melanoleuca
ENSSSCG00000017769	RAB34	86	74.439	ENSACIG00000008620	rab34a	100	74.439	Amphilophus_citrinellus
ENSSSCG00000017769	RAB34	99	78.682	ENSAOCG00000018544	rab34a	97	78.682	Amphiprion_ocellaris
ENSSSCG00000017769	RAB34	99	79.070	ENSAPEG00000010503	rab34a	97	79.070	Amphiprion_percula
ENSSSCG00000017769	RAB34	99	77.606	ENSATEG00000023047	rab34a	97	77.606	Anabas_testudineus
ENSSSCG00000017769	RAB34	100	97.297	ENSANAG00000023861	RAB34	100	97.297	Aotus_nancymaae
ENSSSCG00000017769	RAB34	99	78.764	ENSACLG00000005093	rab34a	97	78.764	Astatotilapia_calliptera
ENSSSCG00000017769	RAB34	99	77.907	ENSAMXG00000043003	rab34a	99	77.907	Astyanax_mexicanus
ENSSSCG00000017769	RAB34	96	95.161	ENSBTAG00000046129	RAB34	100	87.108	Bos_taurus
ENSSSCG00000017769	RAB34	100	96.139	ENSCJAG00000013101	RAB34	100	96.139	Callithrix_jacchus
ENSSSCG00000017769	RAB34	100	96.139	ENSCAFG00000018780	RAB34	100	96.139	Canis_familiaris
ENSSSCG00000017769	RAB34	100	96.139	ENSCAFG00020011740	RAB34	100	96.139	Canis_lupus_dingo
ENSSSCG00000017769	RAB34	100	96.525	ENSCHIG00000014703	RAB34	100	96.525	Capra_hircus
ENSSSCG00000017769	RAB34	100	95.753	ENSTSYG00000030891	RAB34	100	95.753	Carlito_syrichta
ENSSSCG00000017769	RAB34	93	96.266	ENSCAPG00000008237	RAB34	100	96.266	Cavia_aperea
ENSSSCG00000017769	RAB34	100	96.139	ENSCPOG00000001449	RAB34	100	96.139	Cavia_porcellus
ENSSSCG00000017769	RAB34	100	97.297	ENSCCAG00000034632	RAB34	100	97.297	Cebus_capucinus
ENSSSCG00000017769	RAB34	100	96.139	ENSCLAG00000009672	RAB34	99	96.139	Chinchilla_lanigera
ENSSSCG00000017769	RAB34	100	95.753	ENSCSAG00000007143	RAB34	100	95.753	Chlorocebus_sabaeus
ENSSSCG00000017769	RAB34	99	93.798	ENSCHOG00000009871	RAB34	99	93.798	Choloepus_hoffmanni
ENSSSCG00000017769	RAB34	99	82.946	ENSCPBG00000020275	RAB34	99	82.946	Chrysemys_picta_bellii
ENSSSCG00000017769	RAB34	100	96.139	ENSCANG00000033566	RAB34	100	96.139	Colobus_angolensis_palliatus
ENSSSCG00000017769	RAB34	100	96.139	ENSCGRG00001000893	Rab34	100	96.139	Cricetulus_griseus_chok1gshd
ENSSSCG00000017769	RAB34	100	96.139	ENSCGRG00000017588	Rab34	100	96.139	Cricetulus_griseus_crigri
ENSSSCG00000017769	RAB34	99	75.194	ENSCSEG00000012961	rab34a	99	75.194	Cynoglossus_semilaevis
ENSSSCG00000017769	RAB34	99	77.907	ENSCVAG00000018191	rab34a	97	77.907	Cyprinodon_variegatus
ENSSSCG00000017769	RAB34	99	76.448	ENSDARG00000045628	rab34a	100	78.838	Danio_rerio
ENSSSCG00000017769	RAB34	99	95.349	ENSDNOG00000019485	RAB34	99	95.349	Dasypus_novemcinctus
ENSSSCG00000017769	RAB34	100	96.139	ENSDORG00000011452	Rab34	100	96.139	Dipodomys_ordii
ENSSSCG00000017769	RAB34	99	96.124	ENSEASG00005009898	RAB34	99	96.124	Equus_asinus_asinus
ENSSSCG00000017769	RAB34	99	95.753	ENSECAG00000007212	RAB34	99	95.753	Equus_caballus
ENSSSCG00000017769	RAB34	59	98.026	ENSEEUG00000004731	RAB34	100	98.026	Erinaceus_europaeus
ENSSSCG00000017769	RAB34	99	75.581	ENSELUG00000022157	rab34a	98	75.581	Esox_lucius
ENSSSCG00000017769	RAB34	100	96.525	ENSFCAG00000003937	RAB34	100	96.525	Felis_catus
ENSSSCG00000017769	RAB34	100	95.753	ENSFDAG00000016178	RAB34	100	95.753	Fukomys_damarensis
ENSSSCG00000017769	RAB34	99	77.907	ENSFHEG00000013691	rab34a	99	77.907	Fundulus_heteroclitus
ENSSSCG00000017769	RAB34	99	75.969	ENSGMOG00000016238	rab34a	97	75.969	Gadus_morhua
ENSSSCG00000017769	RAB34	99	83.333	ENSGALG00000026315	RAB34	99	83.333	Gallus_gallus
ENSSSCG00000017769	RAB34	99	77.132	ENSGAFG00000012579	rab34a	97	77.132	Gambusia_affinis
ENSSSCG00000017769	RAB34	99	75.581	ENSGACG00000011190	rab34a	97	75.581	Gasterosteus_aculeatus
ENSSSCG00000017769	RAB34	87	81.333	ENSGAGG00000012473	RAB34	94	81.333	Gopherus_agassizii
ENSSSCG00000017769	RAB34	100	96.525	ENSGGOG00000016726	RAB34	100	96.525	Gorilla_gorilla
ENSSSCG00000017769	RAB34	99	79.070	ENSHBUG00000016064	rab34a	97	79.070	Haplochromis_burtoni
ENSSSCG00000017769	RAB34	99	94.574	ENSHGLG00000008023	RAB34	99	94.574	Heterocephalus_glaber_female
ENSSSCG00000017769	RAB34	99	94.574	ENSHGLG00100017982	RAB34	99	94.574	Heterocephalus_glaber_male
ENSSSCG00000017769	RAB34	99	73.643	ENSHCOG00000020527	rab34a	97	73.643	Hippocampus_comes
ENSSSCG00000017769	RAB34	99	77.907	ENSIPUG00000017447	rab34a	99	77.907	Ictalurus_punctatus
ENSSSCG00000017769	RAB34	100	96.911	ENSSTOG00000025062	RAB34	100	96.911	Ictidomys_tridecemlineatus
ENSSSCG00000017769	RAB34	100	96.139	ENSJJAG00000010285	Rab34	100	96.139	Jaculus_jaculus
ENSSSCG00000017769	RAB34	99	77.519	ENSKMAG00000019647	rab34a	97	77.519	Kryptolebias_marmoratus
ENSSSCG00000017769	RAB34	99	77.519	ENSLBEG00000026006	rab34a	97	77.519	Labrus_bergylta
ENSSSCG00000017769	RAB34	99	77.519	ENSLACG00000001081	RAB34	99	77.519	Latimeria_chalumnae
ENSSSCG00000017769	RAB34	99	81.395	ENSLOCG00000005802	rab34a	97	81.395	Lepisosteus_oculatus
ENSSSCG00000017769	RAB34	99	96.512	ENSLAFG00000013385	RAB34	99	96.512	Loxodonta_africana
ENSSSCG00000017769	RAB34	100	96.139	ENSMFAG00000045768	RAB34	100	96.139	Macaca_fascicularis
ENSSSCG00000017769	RAB34	100	96.139	ENSMMUG00000007293	RAB34	100	96.139	Macaca_mulatta
ENSSSCG00000017769	RAB34	100	96.154	ENSMNEG00000030368	RAB34	100	96.154	Macaca_nemestrina
ENSSSCG00000017769	RAB34	83	94.419	ENSMLEG00000034269	RAB34	96	94.419	Mandrillus_leucophaeus
ENSSSCG00000017769	RAB34	99	78.378	ENSMAMG00000018672	rab34a	97	78.378	Mastacembelus_armatus
ENSSSCG00000017769	RAB34	99	79.070	ENSMZEG00005008306	rab34a	97	79.070	Maylandia_zebra
ENSSSCG00000017769	RAB34	100	94.981	ENSMAUG00000017730	Rab34	100	94.981	Mesocricetus_auratus
ENSSSCG00000017769	RAB34	100	96.923	ENSMICG00000016913	RAB34	100	96.923	Microcebus_murinus
ENSSSCG00000017769	RAB34	100	96.525	ENSMOCG00000016580	Rab34	100	96.525	Microtus_ochrogaster
ENSSSCG00000017769	RAB34	99	68.582	ENSMMOG00000014400	rab34a	99	68.582	Mola_mola
ENSSSCG00000017769	RAB34	93	75.519	ENSMODG00000019295	RAB34	90	75.519	Monodelphis_domestica
ENSSSCG00000017769	RAB34	99	77.519	ENSMALG00000016715	rab34a	97	77.519	Monopterus_albus
ENSSSCG00000017769	RAB34	100	95.753	MGP_CAROLIEiJ_G0016794	Rab34	100	95.753	Mus_caroli
ENSSSCG00000017769	RAB34	100	94.981	ENSMUSG00000002059	Rab34	100	94.981	Mus_musculus
ENSSSCG00000017769	RAB34	100	95.367	MGP_PahariEiJ_G0017931	Rab34	100	95.367	Mus_pahari
ENSSSCG00000017769	RAB34	100	95.367	MGP_SPRETEiJ_G0017637	Rab34	100	95.367	Mus_spretus
ENSSSCG00000017769	RAB34	100	97.297	ENSMPUG00000014191	RAB34	100	97.297	Mustela_putorius_furo
ENSSSCG00000017769	RAB34	81	96.651	ENSMLUG00000012440	RAB34	99	96.651	Myotis_lucifugus
ENSSSCG00000017769	RAB34	100	94.208	ENSNGAG00000002744	Rab34	100	94.208	Nannospalax_galili
ENSSSCG00000017769	RAB34	99	78.378	ENSNBRG00000019750	rab34a	99	78.378	Neolamprologus_brichardi
ENSSSCG00000017769	RAB34	100	95.753	ENSNLEG00000002777	RAB34	100	95.753	Nomascus_leucogenys
ENSSSCG00000017769	RAB34	93	90.000	ENSMEUG00000009450	RAB34	99	90.000	Notamacropus_eugenii
ENSSSCG00000017769	RAB34	100	96.139	ENSOPRG00000012602	RAB34	100	96.139	Ochotona_princeps
ENSSSCG00000017769	RAB34	100	95.367	ENSODEG00000012270	RAB34	100	95.367	Octodon_degus
ENSSSCG00000017769	RAB34	99	78.682	ENSONIG00000013175	rab34a	97	78.682	Oreochromis_niloticus
ENSSSCG00000017769	RAB34	99	71.318	ENSOANG00000000147	RAB34	99	71.318	Ornithorhynchus_anatinus
ENSSSCG00000017769	RAB34	99	96.512	ENSOCUG00000023006	RAB34	82	96.512	Oryctolagus_cuniculus
ENSSSCG00000017769	RAB34	99	77.907	ENSORLG00000004394	rab34a	97	77.907	Oryzias_latipes
ENSSSCG00000017769	RAB34	99	78.295	ENSORLG00020010041	rab34a	97	78.295	Oryzias_latipes_hni
ENSSSCG00000017769	RAB34	99	78.682	ENSORLG00015014829	rab34a	97	78.682	Oryzias_latipes_hsok
ENSSSCG00000017769	RAB34	100	76.834	ENSOMEG00000003647	rab34a	84	76.834	Oryzias_melastigma
ENSSSCG00000017769	RAB34	99	96.124	ENSOARG00000003396	RAB34	95	96.124	Ovis_aries
ENSSSCG00000017769	RAB34	100	96.525	ENSPPAG00000037180	RAB34	100	96.525	Pan_paniscus
ENSSSCG00000017769	RAB34	100	96.525	ENSPPRG00000001286	RAB34	100	96.525	Panthera_pardus
ENSSSCG00000017769	RAB34	100	96.525	ENSPTIG00000021241	RAB34	100	96.525	Panthera_tigris_altaica
ENSSSCG00000017769	RAB34	100	96.525	ENSPTRG00000008931	RAB34	100	96.525	Pan_troglodytes
ENSSSCG00000017769	RAB34	100	96.139	ENSPANG00000023435	RAB34	100	96.139	Papio_anubis
ENSSSCG00000017769	RAB34	99	79.070	ENSPKIG00000006695	rab34a	99	79.070	Paramormyrops_kingsleyae
ENSSSCG00000017769	RAB34	99	77.907	ENSPMGG00000004027	rab34a	99	77.907	Periophthalmus_magnuspinnatus
ENSSSCG00000017769	RAB34	100	96.911	ENSPEMG00000015055	Rab34	100	96.911	Peromyscus_maniculatus_bairdii
ENSSSCG00000017769	RAB34	99	91.085	ENSPCIG00000017945	-	64	91.085	Phascolarctos_cinereus
ENSSSCG00000017769	RAB34	99	78.295	ENSPFOG00000008547	rab34a	83	78.295	Poecilia_formosa
ENSSSCG00000017769	RAB34	99	77.907	ENSPLAG00000022991	rab34a	92	77.907	Poecilia_latipinna
ENSSSCG00000017769	RAB34	99	78.682	ENSPMEG00000002086	rab34a	97	78.682	Poecilia_mexicana
ENSSSCG00000017769	RAB34	80	77.184	ENSPREG00000008951	rab34a	83	77.184	Poecilia_reticulata
ENSSSCG00000017769	RAB34	100	93.436	ENSPPYG00000008107	-	100	93.436	Pongo_abelii
ENSSSCG00000017769	RAB34	100	94.595	ENSPCAG00000016994	RAB34	100	94.595	Procavia_capensis
ENSSSCG00000017769	RAB34	100	97.683	ENSPCOG00000021648	RAB34	100	97.683	Propithecus_coquereli
ENSSSCG00000017769	RAB34	100	96.139	ENSPVAG00000002921	RAB34	100	96.139	Pteropus_vampyrus
ENSSSCG00000017769	RAB34	99	79.151	ENSPNYG00000017514	rab34a	99	79.151	Pundamilia_nyererei
ENSSSCG00000017769	RAB34	99	79.845	ENSPNAG00000003179	rab34a	99	79.845	Pygocentrus_nattereri
ENSSSCG00000017769	RAB34	100	94.981	ENSRNOG00000023375	Rab34	100	94.981	Rattus_norvegicus
ENSSSCG00000017769	RAB34	100	95.367	ENSRBIG00000038841	RAB34	100	95.367	Rhinopithecus_bieti
ENSSSCG00000017769	RAB34	100	94.981	ENSRROG00000004951	RAB34	100	94.981	Rhinopithecus_roxellana
ENSSSCG00000017769	RAB34	100	93.436	ENSSBOG00000029883	RAB34	100	93.436	Saimiri_boliviensis_boliviensis
ENSSSCG00000017769	RAB34	98	91.339	ENSSHAG00000014522	RAB34	77	91.339	Sarcophilus_harrisii
ENSSSCG00000017769	RAB34	99	80.233	ENSSFOG00015004325	rab34a	99	80.233	Scleropages_formosus
ENSSSCG00000017769	RAB34	99	77.992	ENSSMAG00000004343	rab34a	97	77.992	Scophthalmus_maximus
ENSSSCG00000017769	RAB34	99	77.907	ENSSDUG00000010942	rab34a	97	77.907	Seriola_dumerili
ENSSSCG00000017769	RAB34	99	78.295	ENSSLDG00000009573	rab34a	97	78.295	Seriola_lalandi_dorsalis
ENSSSCG00000017769	RAB34	99	79.070	ENSSPAG00000017348	rab34a	97	79.070	Stegastes_partitus
ENSSSCG00000017769	RAB34	99	62.162	ENSTRUG00000010393	-	99	62.162	Takifugu_rubripes
ENSSSCG00000017769	RAB34	78	75.122	ENSTRUG00000005937	rab34a	91	75.122	Takifugu_rubripes
ENSSSCG00000017769	RAB34	99	76.357	ENSTNIG00000016231	rab34a	99	76.357	Tetraodon_nigroviridis
ENSSSCG00000017769	RAB34	99	96.124	ENSTBEG00000005193	RAB34	99	96.124	Tupaia_belangeri
ENSSSCG00000017769	RAB34	100	96.525	ENSTTRG00000004102	RAB34	100	96.525	Tursiops_truncatus
ENSSSCG00000017769	RAB34	100	96.139	ENSUAMG00000005003	RAB34	100	96.139	Ursus_americanus
ENSSSCG00000017769	RAB34	93	95.851	ENSUMAG00000011766	-	63	95.851	Ursus_maritimus
ENSSSCG00000017769	RAB34	100	96.139	ENSVVUG00000017083	RAB34	100	96.139	Vulpes_vulpes
ENSSSCG00000017769	RAB34	99	81.395	ENSXETG00000019257	rab34	99	81.395	Xenopus_tropicalis
ENSSSCG00000017769	RAB34	99	77.132	ENSXCOG00000009541	rab34a	99	77.132	Xiphophorus_couchianus
ENSSSCG00000017769	RAB34	99	77.519	ENSXMAG00000026496	rab34a	97	77.519	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005929	cilium	-	IEA	Component
GO:0030030	cell projection organization	-	IEA	Process
GO:0030670	phagocytic vesicle membrane	-	IEA	Component
GO:0045335	phagocytic vesicle	-	ISS	Component
GO:0045880	positive regulation of smoothened signaling pathway	-	ISS	Process
GO:0090382	phagosome maturation	-	ISS	Process
GO:0090385	phagosome-lysosome fusion	-	ISS	Process