EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000017938 (Gene tree)
Gene ID: 100519387
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 6554 bases
Position: chr12:52635098-52641651
Accession: 100519387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000019004	CSD	PF00313.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000019522	YBX2-201	2142	XM_003131938	ENSSSCP00000019004	360 (aa)	XP_003131986	F1SFU0

Gene Model

Click here to download ENSSSCG00000017938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000017938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000017938	YBX2	84	89.935	ENSG00000006047	YBX2	99	87.654	Homo_sapiens
ENSSSCG00000017938	YBX2	54	90.306	ENSAMEG00000016564	YBX2	87	90.104	Ailuropoda_melanoleuca
ENSSSCG00000017938	YBX2	78	95.374	ENSANAG00000019540	YBX2	86	95.156	Aotus_nancymaae
ENSSSCG00000017938	YBX2	100	97.222	ENSBTAG00000009126	YBX2	100	97.222	Bos_taurus
ENSSSCG00000017938	YBX2	84	91.391	ENSCJAG00000016581	-	84	91.060	Callithrix_jacchus
ENSSSCG00000017938	YBX2	76	91.241	ENSCJAG00000042146	-	97	91.241	Callithrix_jacchus
ENSSSCG00000017938	YBX2	70	78.968	ENSCAFG00000005162	-	89	78.968	Canis_familiaris
ENSSSCG00000017938	YBX2	100	96.185	ENSCAFG00000016128	-	100	96.185	Canis_familiaris
ENSSSCG00000017938	YBX2	84	93.204	ENSCAFG00020008884	YBX2	84	93.204	Canis_lupus_dingo
ENSSSCG00000017938	YBX2	100	97.222	ENSCHIG00000016407	YBX2	100	97.222	Capra_hircus
ENSSSCG00000017938	YBX2	75	91.241	ENSTSYG00000030765	YBX2	92	91.241	Carlito_syrichta
ENSSSCG00000017938	YBX2	74	96.255	ENSCAPG00000011432	YBX2	100	96.255	Cavia_aperea
ENSSSCG00000017938	YBX2	100	95.833	ENSCPOG00000009543	YBX2	100	95.833	Cavia_porcellus
ENSSSCG00000017938	YBX2	84	96.026	ENSCCAG00000025671	YBX2	89	94.304	Cebus_capucinus
ENSSSCG00000017938	YBX2	84	94.702	ENSCATG00000036919	YBX2	84	94.702	Cercocebus_atys
ENSSSCG00000017938	YBX2	75	96.667	ENSCLAG00000010306	YBX2	96	96.667	Chinchilla_lanigera
ENSSSCG00000017938	YBX2	84	94.702	ENSCSAG00000011857	YBX2	84	94.702	Chlorocebus_sabaeus
ENSSSCG00000017938	YBX2	74	67.910	ENSCPBG00000022288	YBX2	85	69.517	Chrysemys_picta_bellii
ENSSSCG00000017938	YBX2	74	94.030	ENSCANG00000007129	YBX2	97	94.030	Colobus_angolensis_palliatus
ENSSSCG00000017938	YBX2	100	96.944	ENSCGRG00001000751	Ybx2	100	96.944	Cricetulus_griseus_chok1gshd
ENSSSCG00000017938	YBX2	75	96.283	ENSCGRG00000007683	Ybx2	99	95.926	Cricetulus_griseus_crigri
ENSSSCG00000017938	YBX2	75	94.444	ENSDNOG00000013746	YBX2	97	84.667	Dasypus_novemcinctus
ENSSSCG00000017938	YBX2	74	97.388	ENSDORG00000010882	Ybx2	95	97.388	Dipodomys_ordii
ENSSSCG00000017938	YBX2	54	87.500	ENSETEG00000014271	YBX2	51	86.154	Echinops_telfairi
ENSSSCG00000017938	YBX2	83	91.946	ENSEASG00005018928	YBX2	83	91.837	Equus_asinus_asinus
ENSSSCG00000017938	YBX2	90	90.491	ENSECAG00000009996	YBX2	79	90.099	Equus_caballus
ENSSSCG00000017938	YBX2	83	96.633	ENSFCAG00000018097	YBX2	85	96.026	Felis_catus
ENSSSCG00000017938	YBX2	70	67.984	ENSGAGG00000016159	YBX2	88	73.913	Gopherus_agassizii
ENSSSCG00000017938	YBX2	84	92.053	ENSGGOG00000007399	YBX2	84	92.053	Gorilla_gorilla
ENSSSCG00000017938	YBX2	84	94.040	ENSHGLG00000014186	YBX2	84	94.040	Heterocephalus_glaber_female
ENSSSCG00000017938	YBX2	75	97.037	ENSSTOG00000008630	YBX2	99	97.037	Ictidomys_tridecemlineatus
ENSSSCG00000017938	YBX2	75	97.398	ENSJJAG00000013072	Ybx2	95	97.398	Jaculus_jaculus
ENSSSCG00000017938	YBX2	100	96.944	ENSLAFG00000014006	YBX2	100	96.944	Loxodonta_africana
ENSSSCG00000017938	YBX2	84	94.702	ENSMFAG00000039921	YBX2	84	94.702	Macaca_fascicularis
ENSSSCG00000017938	YBX2	84	94.702	ENSMNEG00000045221	YBX2	84	94.702	Macaca_nemestrina
ENSSSCG00000017938	YBX2	77	73.022	ENSMLEG00000029266	-	84	73.381	Mandrillus_leucophaeus
ENSSSCG00000017938	YBX2	88	84.227	ENSMLEG00000039452	YBX2	97	94.776	Mandrillus_leucophaeus
ENSSSCG00000017938	YBX2	100	96.944	ENSMAUG00000022062	Ybx2	100	96.944	Mesocricetus_auratus
ENSSSCG00000017938	YBX2	100	95.556	ENSMICG00000012453	YBX2	100	95.556	Microcebus_murinus
ENSSSCG00000017938	YBX2	100	96.944	ENSMOCG00000013958	Ybx2	100	96.944	Microtus_ochrogaster
ENSSSCG00000017938	YBX2	73	93.870	ENSMODG00000017596	YBX2	78	91.259	Monodelphis_domestica
ENSSSCG00000017938	YBX2	100	96.944	MGP_CAROLIEiJ_G0016606	Ybx2	100	96.944	Mus_caroli
ENSSSCG00000017938	YBX2	100	96.944	ENSMUSG00000018554	Ybx2	100	96.944	Mus_musculus
ENSSSCG00000017938	YBX2	100	96.944	MGP_PahariEiJ_G0017737	Ybx2	100	96.944	Mus_pahari
ENSSSCG00000017938	YBX2	100	96.944	MGP_SPRETEiJ_G0017442	Ybx2	100	96.944	Mus_spretus
ENSSSCG00000017938	YBX2	68	91.057	ENSMPUG00000010386	YBX2	93	91.057	Mustela_putorius_furo
ENSSSCG00000017938	YBX2	93	88.358	ENSMLUG00000004686	YBX2	90	88.742	Myotis_lucifugus
ENSSSCG00000017938	YBX2	84	94.702	ENSNGAG00000011707	Ybx2	85	94.702	Nannospalax_galili
ENSSSCG00000017938	YBX2	83	94.333	ENSNLEG00000008063	-	100	93.000	Nomascus_leucogenys
ENSSSCG00000017938	YBX2	77	88.809	ENSMEUG00000006947	YBX2	90	87.086	Notamacropus_eugenii
ENSSSCG00000017938	YBX2	81	90.000	ENSOPRG00000013773	YBX2	100	89.655	Ochotona_princeps
ENSSSCG00000017938	YBX2	84	94.371	ENSODEG00000017530	YBX2	96	95.185	Octodon_degus
ENSSSCG00000017938	YBX2	87	84.345	ENSOCUG00000015064	YBX2	95	86.242	Oryctolagus_cuniculus
ENSSSCG00000017938	YBX2	74	96.642	ENSOGAG00000004392	YBX2	100	96.642	Otolemur_garnettii
ENSSSCG00000017938	YBX2	77	96.029	ENSOARG00000011562	YBX2	78	96.029	Ovis_aries
ENSSSCG00000017938	YBX2	82	90.033	ENSPPAG00000041892	YBX2	100	90.033	Pan_paniscus
ENSSSCG00000017938	YBX2	100	95.845	ENSPPRG00000000782	YBX2	100	95.845	Panthera_pardus
ENSSSCG00000017938	YBX2	87	80.511	ENSPTRG00000051288	-	85	90.977	Pan_troglodytes
ENSSSCG00000017938	YBX2	84	90.584	ENSPTRG00000008673	YBX2	89	96.129	Pan_troglodytes
ENSSSCG00000017938	YBX2	83	94.649	ENSPANG00000024250	YBX2	84	94.649	Papio_anubis
ENSSSCG00000017938	YBX2	77	71.480	ENSPANG00000032747	-	74	66.887	Papio_anubis
ENSSSCG00000017938	YBX2	74	71.014	ENSPSIG00000012364	YBX2	99	74.275	Pelodiscus_sinensis
ENSSSCG00000017938	YBX2	77	84.116	ENSPCIG00000028819	YBX2	85	92.050	Phascolarctos_cinereus
ENSSSCG00000017938	YBX2	85	94.444	ENSPCAG00000008019	YBX2	84	94.702	Procavia_capensis
ENSSSCG00000017938	YBX2	83	95.333	ENSPCOG00000006030	YBX2	84	95.033	Propithecus_coquereli
ENSSSCG00000017938	YBX2	90	85.583	ENSPVAG00000005050	YBX2	84	85.149	Pteropus_vampyrus
ENSSSCG00000017938	YBX2	100	96.944	ENSRNOG00000017117	Ybx2	100	96.944	Rattus_norvegicus
ENSSSCG00000017938	YBX2	84	94.371	ENSRBIG00000040919	YBX2	85	94.371	Rhinopithecus_bieti
ENSSSCG00000017938	YBX2	75	87.681	ENSRROG00000041728	YBX2	93	87.681	Rhinopithecus_roxellana
ENSSSCG00000017938	YBX2	83	88.667	ENSSBOG00000029566	YBX2	97	95.522	Saimiri_boliviensis_boliviensis
ENSSSCG00000017938	YBX2	77	88.214	ENSSHAG00000007786	YBX2	95	86.667	Sarcophilus_harrisii
ENSSSCG00000017938	YBX2	100	96.111	ENSSARG00000000488	YBX2	100	96.111	Sorex_araneus
ENSSSCG00000017938	YBX2	81	64.527	ENSSPUG00000018250	YBX2	99	68.687	Sphenodon_punctatus
ENSSSCG00000017938	YBX2	83	93.667	ENSTBEG00000001266	YBX2	89	93.667	Tupaia_belangeri
ENSSSCG00000017938	YBX2	72	95.484	ENSTTRG00000009780	YBX2	72	95.484	Tursiops_truncatus
ENSSSCG00000017938	YBX2	72	90.977	ENSUAMG00000014725	YBX2	100	90.977	Ursus_americanus
ENSSSCG00000017938	YBX2	68	89.683	ENSUMAG00000015222	YBX2	90	89.683	Ursus_maritimus
ENSSSCG00000017938	YBX2	68	78.049	ENSVPAG00000003104	-	100	78.049	Vicugna_pacos
ENSSSCG00000017938	YBX2	73	91.418	ENSVVUG00000027830	-	100	91.418	Vulpes_vulpes
ENSSSCG00000017938	YBX2	70	86.508	ENSVVUG00000012111	-	77	86.508	Vulpes_vulpes