EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000021023 (Gene tree)
Gene ID: 100627258
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 62974 bases
Position: chr13:195333260-195396233
Accession: 100627258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000026177	RRM_1	PF00076.22	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000030551	SCAF4-201	8600	XM_003358925	ENSSSCP00000026177	1132 (aa)	XP_003358973	I3LPZ9

Gene Model

Click here to download ENSSSCG00000021023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000021023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000021023	SCAF4	100	92.700	ENSG00000156304	SCAF4	100	92.436	Homo_sapiens
ENSSSCG00000021023	SCAF4	79	54.496	ENSAPOG00000002946	scaf4a	55	55.947	Acanthochromis_polyacanthus
ENSSSCG00000021023	SCAF4	71	90.996	ENSAMEG00000014987	SCAF4	97	91.299	Ailuropoda_melanoleuca
ENSSSCG00000021023	SCAF4	99	72.586	ENSAPLG00000002509	SCAF4	59	81.997	Anas_platyrhynchos
ENSSSCG00000021023	SCAF4	63	64.994	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSSSCG00000021023	SCAF4	100	90.164	ENSANAG00000037494	SCAF4	100	90.078	Aotus_nancymaae
ENSSSCG00000021023	SCAF4	93	50.362	ENSAMXG00000008585	scaf4a	60	61.699	Astyanax_mexicanus
ENSSSCG00000021023	SCAF4	100	90.069	ENSBTAG00000018855	SCAF4	100	90.155	Bos_taurus
ENSSSCG00000021023	SCAF4	100	90.250	ENSCJAG00000008993	SCAF4	100	90.250	Callithrix_jacchus
ENSSSCG00000021023	SCAF4	99	91.463	ENSCAFG00000008863	SCAF4	99	91.725	Canis_familiaris
ENSSSCG00000021023	SCAF4	99	89.326	ENSCAFG00020026019	SCAF4	100	90.820	Canis_lupus_dingo
ENSSSCG00000021023	SCAF4	100	89.896	ENSCHIG00000008385	SCAF4	100	89.810	Capra_hircus
ENSSSCG00000021023	SCAF4	91	90.664	ENSTSYG00000011344	SCAF4	98	90.378	Carlito_syrichta
ENSSSCG00000021023	SCAF4	100	90.510	ENSCPOG00000012443	SCAF4	100	90.685	Cavia_porcellus
ENSSSCG00000021023	SCAF4	100	90.164	ENSCCAG00000033727	SCAF4	100	90.078	Cebus_capucinus
ENSSSCG00000021023	SCAF4	100	90.525	ENSCATG00000030379	SCAF4	100	90.525	Cercocebus_atys
ENSSSCG00000021023	SCAF4	99	89.034	ENSCLAG00000006298	SCAF4	100	89.295	Chinchilla_lanigera
ENSSSCG00000021023	SCAF4	100	90.336	ENSCSAG00000009438	SCAF4	100	90.336	Chlorocebus_sabaeus
ENSSSCG00000021023	SCAF4	100	90.854	ENSCANG00000029847	SCAF4	100	90.595	Colobus_angolensis_palliatus
ENSSSCG00000021023	SCAF4	66	86.176	ENSCGRG00001020821	Scaf4	65	85.382	Cricetulus_griseus_chok1gshd
ENSSSCG00000021023	SCAF4	67	85.366	ENSCGRG00000014360	Scaf4	100	78.908	Cricetulus_griseus_crigri
ENSSSCG00000021023	SCAF4	79	53.074	ENSCSEG00000019549	scaf4a	53	55.556	Cynoglossus_semilaevis
ENSSSCG00000021023	SCAF4	79	53.433	ENSDARG00000077093	scaf4a	56	59.789	Danio_rerio
ENSSSCG00000021023	SCAF4	100	87.133	ENSDNOG00000019014	SCAF4	94	87.651	Dasypus_novemcinctus
ENSSSCG00000021023	SCAF4	96	77.887	ENSETEG00000000583	SCAF4	99	77.261	Echinops_telfairi
ENSSSCG00000021023	SCAF4	100	92.135	ENSEASG00005007756	SCAF4	100	92.135	Equus_asinus_asinus
ENSSSCG00000021023	SCAF4	100	92.221	ENSECAG00000014248	SCAF4	100	92.048	Equus_caballus
ENSSSCG00000021023	SCAF4	57	52.862	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSSSCG00000021023	SCAF4	100	92.135	ENSFCAG00000002228	SCAF4	100	92.135	Felis_catus
ENSSSCG00000021023	SCAF4	99	85.360	ENSFDAG00000017780	SCAF4	100	85.274	Fukomys_damarensis
ENSSSCG00000021023	SCAF4	59	60.145	ENSFHEG00000007634	scaf4b	55	72.152	Fundulus_heteroclitus
ENSSSCG00000021023	SCAF4	100	74.377	ENSGALG00000033965	SCAF4	59	82.530	Gallus_gallus
ENSSSCG00000021023	SCAF4	93	90.476	ENSGGOG00000015557	SCAF4	100	92.932	Gorilla_gorilla
ENSSSCG00000021023	SCAF4	100	88.306	ENSHGLG00000010582	SCAF4	100	88.306	Heterocephalus_glaber_female
ENSSSCG00000021023	SCAF4	99	88.164	ENSHGLG00100009441	SCAF4	100	88.164	Heterocephalus_glaber_male
ENSSSCG00000021023	SCAF4	99	82.780	ENSSTOG00000004450	SCAF4	100	83.217	Ictidomys_tridecemlineatus
ENSSSCG00000021023	SCAF4	99	85.627	ENSJJAG00000019447	Scaf4	99	85.889	Jaculus_jaculus
ENSSSCG00000021023	SCAF4	60	59.630	ENSKMAG00000005742	scaf4b	54	74.522	Kryptolebias_marmoratus
ENSSSCG00000021023	SCAF4	97	58.925	ENSLACG00000013913	SCAF4	59	67.697	Latimeria_chalumnae
ENSSSCG00000021023	SCAF4	95	55.663	ENSLOCG00000009162	scaf4a	59	66.325	Lepisosteus_oculatus
ENSSSCG00000021023	SCAF4	99	89.670	ENSLAFG00000010710	SCAF4	100	89.844	Loxodonta_africana
ENSSSCG00000021023	SCAF4	100	90.292	ENSMFAG00000037668	SCAF4	100	90.378	Macaca_fascicularis
ENSSSCG00000021023	SCAF4	100	90.206	ENSMMUG00000001712	SCAF4	100	90.292	Macaca_mulatta
ENSSSCG00000021023	SCAF4	100	90.129	ENSMNEG00000032966	SCAF4	100	90.300	Macaca_nemestrina
ENSSSCG00000021023	SCAF4	99	90.104	ENSMLEG00000039674	SCAF4	100	89.757	Mandrillus_leucophaeus
ENSSSCG00000021023	SCAF4	99	74.090	ENSMGAG00000014515	SCAF4	59	82.443	Meleagris_gallopavo
ENSSSCG00000021023	SCAF4	99	85.402	ENSMAUG00000013307	Scaf4	100	85.389	Mesocricetus_auratus
ENSSSCG00000021023	SCAF4	100	90.674	ENSMICG00000005256	SCAF4	100	90.587	Microcebus_murinus
ENSSSCG00000021023	SCAF4	98	87.237	ENSMOCG00000012087	Scaf4	99	84.443	Microtus_ochrogaster
ENSSSCG00000021023	SCAF4	63	86.695	ENSMODG00000021040	SCAF4	100	81.450	Monodelphis_domestica
ENSSSCG00000021023	SCAF4	100	85.990	MGP_CAROLIEiJ_G0020944	Scaf4	95	86.194	Mus_caroli
ENSSSCG00000021023	SCAF4	100	85.224	ENSMUSG00000022983	Scaf4	95	85.032	Mus_musculus
ENSSSCG00000021023	SCAF4	98	86.544	MGP_PahariEiJ_G0016649	Scaf4	95	85.533	Mus_pahari
ENSSSCG00000021023	SCAF4	100	81.276	MGP_SPRETEiJ_G0021850	Scaf4	100	84.772	Mus_spretus
ENSSSCG00000021023	SCAF4	100	90.284	ENSMPUG00000001078	SCAF4	100	90.284	Mustela_putorius_furo
ENSSSCG00000021023	SCAF4	99	74.856	ENSMLUG00000011472	SCAF4	79	80.881	Myotis_lucifugus
ENSSSCG00000021023	SCAF4	99	87.881	ENSNGAG00000005214	Scaf4	99	88.087	Nannospalax_galili
ENSSSCG00000021023	SCAF4	100	90.509	ENSNLEG00000003569	SCAF4	100	90.336	Nomascus_leucogenys
ENSSSCG00000021023	SCAF4	85	78.142	ENSOPRG00000007016	SCAF4	77	85.349	Ochotona_princeps
ENSSSCG00000021023	SCAF4	100	86.348	ENSODEG00000002718	SCAF4	100	85.836	Octodon_degus
ENSSSCG00000021023	SCAF4	70	58.270	ENSONIG00000004687	scaf4a	51	75.000	Oreochromis_niloticus
ENSSSCG00000021023	SCAF4	100	89.807	ENSOCUG00000008336	SCAF4	100	89.895	Oryctolagus_cuniculus
ENSSSCG00000021023	SCAF4	99	80.181	ENSOGAG00000014653	SCAF4	94	90.818	Otolemur_garnettii
ENSSSCG00000021023	SCAF4	99	89.102	ENSOARG00000013894	SCAF4	99	89.091	Ovis_aries
ENSSSCG00000021023	SCAF4	100	90.854	ENSPPAG00000028535	SCAF4	100	90.595	Pan_paniscus
ENSSSCG00000021023	SCAF4	99	91.718	ENSPPRG00000000635	SCAF4	100	92.066	Panthera_pardus
ENSSSCG00000021023	SCAF4	99	88.317	ENSPTIG00000021578	SCAF4	99	84.872	Panthera_tigris_altaica
ENSSSCG00000021023	SCAF4	100	90.854	ENSPTRG00000013848	SCAF4	100	90.595	Pan_troglodytes
ENSSSCG00000021023	SCAF4	100	90.034	ENSPANG00000017332	SCAF4	100	90.206	Papio_anubis
ENSSSCG00000021023	SCAF4	66	63.364	ENSPKIG00000022408	scaf4a	90	65.929	Paramormyrops_kingsleyae
ENSSSCG00000021023	SCAF4	99	73.374	ENSPSIG00000014242	SCAF4	57	83.028	Pelodiscus_sinensis
ENSSSCG00000021023	SCAF4	99	83.986	ENSPCIG00000028183	SCAF4	91	83.452	Phascolarctos_cinereus
ENSSSCG00000021023	SCAF4	70	54.912	ENSPFOG00000017156	scaf4a	54	73.171	Poecilia_formosa
ENSSSCG00000021023	SCAF4	57	60.741	ENSPLAG00000001972	scaf4a	62	73.780	Poecilia_latipinna
ENSSSCG00000021023	SCAF4	54	56.631	ENSPREG00000013510	scaf4b	58	66.837	Poecilia_reticulata
ENSSSCG00000021023	SCAF4	100	90.768	ENSPPYG00000011355	SCAF4	100	90.682	Pongo_abelii
ENSSSCG00000021023	SCAF4	100	79.534	ENSPCAG00000009998	SCAF4	100	77.288	Procavia_capensis
ENSSSCG00000021023	SCAF4	100	90.768	ENSPCOG00000018710	SCAF4	100	90.768	Propithecus_coquereli
ENSSSCG00000021023	SCAF4	100	91.011	ENSPVAG00000005220	SCAF4	100	91.098	Pteropus_vampyrus
ENSSSCG00000021023	SCAF4	76	58.716	ENSPNAG00000016892	scaf4a	60	63.476	Pygocentrus_nattereri
ENSSSCG00000021023	SCAF4	98	86.577	ENSRNOG00000002104	Scaf4	95	85.132	Rattus_norvegicus
ENSSSCG00000021023	SCAF4	99	88.384	ENSRBIG00000040007	SCAF4	61	90.729	Rhinopithecus_bieti
ENSSSCG00000021023	SCAF4	100	91.113	ENSRROG00000029488	SCAF4	100	90.768	Rhinopithecus_roxellana
ENSSSCG00000021023	SCAF4	63	85.154	ENSSHAG00000001581	SCAF4	100	80.726	Sarcophilus_harrisii
ENSSSCG00000021023	SCAF4	83	48.238	ENSSFOG00015006338	scaf4a	54	56.937	Scleropages_formosus
ENSSSCG00000021023	SCAF4	64	60.000	ENSSMAG00000003738	scaf4b	54	72.152	Scophthalmus_maximus
ENSSSCG00000021023	SCAF4	79	52.396	ENSSMAG00000017901	scaf4a	53	52.685	Scophthalmus_maximus
ENSSSCG00000021023	SCAF4	100	87.005	ENSSARG00000009994	SCAF4	100	86.661	Sorex_araneus
ENSSSCG00000021023	SCAF4	74	69.968	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSSSCG00000021023	SCAF4	99	90.759	ENSTTRG00000010963	SCAF4	100	91.107	Tursiops_truncatus
ENSSSCG00000021023	SCAF4	100	93.656	ENSUAMG00000008860	SCAF4	100	93.744	Ursus_americanus
ENSSSCG00000021023	SCAF4	99	89.589	ENSUMAG00000016962	SCAF4	100	90.026	Ursus_maritimus
ENSSSCG00000021023	SCAF4	99	91.514	ENSVVUG00000002953	SCAF4	100	91.776	Vulpes_vulpes
ENSSSCG00000021023	SCAF4	99	55.724	ENSXETG00000007351	scaf4	63	61.657	Xenopus_tropicalis