EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000021354 (Gene tree)
Gene ID: 100622832
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 185216 bases
Position: chr18:13821546-14006761
Accession: 100622832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000021626	RRM_1	PF00076.22	1.2e-05	1	1
ENSSSCP00000046681	RRM_1	PF00076.22	1.3e-05	1	1
ENSSSCP00000039702	RRM_1	PF00076.22	1.3e-05	1	1
ENSSSCP00000017512	RRM_1	PF00076.22	1.6e-05	1	1
ENSSSCP00000049845	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000029334	CNOT4-201	2039	-	ENSSSCP00000021626	557 (aa)	-	I3LC53
ENSSSCT00000046643	CNOT4-205	5823	XM_021078772	ENSSSCP00000039702	575 (aa)	XP_020934431	A0A287A751
ENSSSCT00000043394	CNOT4-202	3528	XM_021078767	ENSSSCP00000049845	713 (aa)	XP_020934426	A0A287B0B4
ENSSSCT00000017996	CNOT4-204	3306	XM_021078769	ENSSSCP00000017512	642 (aa)	XP_020934428	F1SNI5
ENSSSCT00000053462	CNOT4-203	6089	XM_021078773	ENSSSCP00000046681	572 (aa)	XP_020934432	A0A287AS44

Gene Model

Click here to download ENSSSCG00000021354's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000021354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000021354	CNOT4	100	99.377	ENSG00000080802	CNOT4	100	99.377	Homo_sapiens
ENSSSCG00000021354	CNOT4	96	90.566	ENSAPOG00000016272	cnot4a	95	77.355	Acanthochromis_polyacanthus
ENSSSCG00000021354	CNOT4	99	97.122	ENSAMEG00000012081	CNOT4	92	98.174	Ailuropoda_melanoleuca
ENSSSCG00000021354	CNOT4	100	65.455	ENSACIG00000003011	cnot4a	100	60.595	Amphilophus_citrinellus
ENSSSCG00000021354	CNOT4	99	89.299	ENSAOCG00000010792	cnot4a	92	89.299	Amphiprion_ocellaris
ENSSSCG00000021354	CNOT4	99	89.299	ENSAPEG00000004680	cnot4a	92	89.299	Amphiprion_percula
ENSSSCG00000021354	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSSSCG00000021354	CNOT4	100	88.714	ENSAPLG00000016441	CNOT4	100	88.714	Anas_platyrhynchos
ENSSSCG00000021354	CNOT4	100	88.583	ENSACAG00000011154	CNOT4	100	88.583	Anolis_carolinensis
ENSSSCG00000021354	CNOT4	100	99.476	ENSANAG00000032156	CNOT4	100	99.476	Aotus_nancymaae
ENSSSCG00000021354	CNOT4	98	90.566	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSSSCG00000021354	CNOT4	99	93.962	ENSAMXG00000011473	cnot4b	100	71.704	Astyanax_mexicanus
ENSSSCG00000021354	CNOT4	100	72.603	ENSAMXG00000001373	cnot4a	100	71.689	Astyanax_mexicanus
ENSSSCG00000021354	CNOT4	100	99.478	ENSBTAG00000017919	CNOT4	100	99.478	Bos_taurus
ENSSSCG00000021354	CNOT4	100	99.476	ENSCJAG00000012532	CNOT4	100	99.476	Callithrix_jacchus
ENSSSCG00000021354	CNOT4	100	99.825	ENSCAFG00000003223	CNOT4	100	99.825	Canis_familiaris
ENSSSCG00000021354	CNOT4	100	99.825	ENSCAFG00020000093	CNOT4	100	99.825	Canis_lupus_dingo
ENSSSCG00000021354	CNOT4	100	99.650	ENSCHIG00000010955	CNOT4	100	99.650	Capra_hircus
ENSSSCG00000021354	CNOT4	100	99.650	ENSTSYG00000000893	CNOT4	100	99.650	Carlito_syrichta
ENSSSCG00000021354	CNOT4	99	98.039	ENSCAPG00000006213	CNOT4	100	95.639	Cavia_aperea
ENSSSCG00000021354	CNOT4	100	98.442	ENSCPOG00000011526	CNOT4	100	98.442	Cavia_porcellus
ENSSSCG00000021354	CNOT4	100	99.478	ENSCCAG00000024414	CNOT4	100	99.478	Cebus_capucinus
ENSSSCG00000021354	CNOT4	100	99.478	ENSCATG00000022607	CNOT4	100	99.478	Cercocebus_atys
ENSSSCG00000021354	CNOT4	100	98.951	ENSCLAG00000001857	CNOT4	100	98.951	Chinchilla_lanigera
ENSSSCG00000021354	CNOT4	100	98.738	ENSCSAG00000009096	CNOT4	100	98.738	Chlorocebus_sabaeus
ENSSSCG00000021354	CNOT4	70	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSSSCG00000021354	CNOT4	100	96.073	ENSCPBG00000004959	CNOT4	100	96.073	Chrysemys_picta_bellii
ENSSSCG00000021354	CNOT4	66	69.323	ENSCING00000004364	-	93	42.515	Ciona_intestinalis
ENSSSCG00000021354	CNOT4	100	99.301	ENSCANG00000029319	CNOT4	100	99.301	Colobus_angolensis_palliatus
ENSSSCG00000021354	CNOT4	100	99.304	ENSCGRG00001014651	Cnot4	100	99.304	Cricetulus_griseus_chok1gshd
ENSSSCG00000021354	CNOT4	100	99.301	ENSCGRG00000005727	Cnot4	100	99.301	Cricetulus_griseus_crigri
ENSSSCG00000021354	CNOT4	98	90.566	ENSCSEG00000015080	cnot4a	84	89.299	Cynoglossus_semilaevis
ENSSSCG00000021354	CNOT4	98	90.566	ENSCVAG00000009399	cnot4a	100	73.740	Cyprinodon_variegatus
ENSSSCG00000021354	CNOT4	100	67.290	ENSDARG00000007639	cnot4b	100	66.049	Danio_rerio
ENSSSCG00000021354	CNOT4	100	69.816	ENSDARG00000007045	cnot4a	100	69.330	Danio_rerio
ENSSSCG00000021354	CNOT4	100	98.457	ENSDNOG00000009409	CNOT4	100	98.457	Dasypus_novemcinctus
ENSSSCG00000021354	CNOT4	100	99.304	ENSDORG00000012268	Cnot4	100	99.304	Dipodomys_ordii
ENSSSCG00000021354	CNOT4	100	92.847	ENSETEG00000013407	CNOT4	89	95.387	Echinops_telfairi
ENSSSCG00000021354	CNOT4	100	99.130	ENSEASG00005014430	CNOT4	100	99.130	Equus_asinus_asinus
ENSSSCG00000021354	CNOT4	100	99.130	ENSECAG00000020262	CNOT4	100	99.130	Equus_caballus
ENSSSCG00000021354	CNOT4	100	73.235	ENSELUG00000011540	cnot4b	97	71.508	Esox_lucius
ENSSSCG00000021354	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSSSCG00000021354	CNOT4	100	99.825	ENSFCAG00000011904	CNOT4	100	99.825	Felis_catus
ENSSSCG00000021354	CNOT4	100	89.108	ENSFALG00000011194	CNOT4	100	89.108	Ficedula_albicollis
ENSSSCG00000021354	CNOT4	100	99.304	ENSFDAG00000013525	CNOT4	100	99.304	Fukomys_damarensis
ENSSSCG00000021354	CNOT4	99	89.259	ENSFHEG00000006608	cnot4a	100	73.141	Fundulus_heteroclitus
ENSSSCG00000021354	CNOT4	97	60.062	ENSGMOG00000001329	cnot4a	97	62.211	Gadus_morhua
ENSSSCG00000021354	CNOT4	100	95.372	ENSGALG00000011682	CNOT4	100	95.372	Gallus_gallus
ENSSSCG00000021354	CNOT4	100	72.913	ENSGACG00000004276	cnot4a	100	70.817	Gasterosteus_aculeatus
ENSSSCG00000021354	CNOT4	100	95.512	ENSGAGG00000017331	CNOT4	100	95.512	Gopherus_agassizii
ENSSSCG00000021354	CNOT4	96	95.231	ENSGGOG00000000142	CNOT4	99	98.649	Gorilla_gorilla
ENSSSCG00000021354	CNOT4	98	90.566	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSSSCG00000021354	CNOT4	100	99.304	ENSHGLG00000011533	CNOT4	100	99.304	Heterocephalus_glaber_female
ENSSSCG00000021354	CNOT4	100	99.304	ENSHGLG00100013058	CNOT4	100	99.304	Heterocephalus_glaber_male
ENSSSCG00000021354	CNOT4	99	87.226	ENSHCOG00000015815	cnot4a	92	87.226	Hippocampus_comes
ENSSSCG00000021354	CNOT4	100	71.196	ENSIPUG00000016994	cnot4b	100	70.753	Ictalurus_punctatus
ENSSSCG00000021354	CNOT4	99	91.481	ENSIPUG00000006393	cnot4	100	71.515	Ictalurus_punctatus
ENSSSCG00000021354	CNOT4	100	99.650	ENSSTOG00000007717	CNOT4	100	99.650	Ictidomys_tridecemlineatus
ENSSSCG00000021354	CNOT4	100	99.301	ENSJJAG00000016618	Cnot4	100	99.301	Jaculus_jaculus
ENSSSCG00000021354	CNOT4	100	81.818	ENSJJAG00000019991	-	100	81.818	Jaculus_jaculus
ENSSSCG00000021354	CNOT4	97	90.566	ENSKMAG00000004581	cnot4a	100	72.948	Kryptolebias_marmoratus
ENSSSCG00000021354	CNOT4	96	90.943	ENSLBEG00000009999	cnot4a	100	66.420	Labrus_bergylta
ENSSSCG00000021354	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSSSCG00000021354	CNOT4	99	93.382	ENSLOCG00000016126	cnot4a	100	77.102	Lepisosteus_oculatus
ENSSSCG00000021354	CNOT4	100	97.896	ENSLAFG00000000709	CNOT4	100	97.896	Loxodonta_africana
ENSSSCG00000021354	CNOT4	100	99.476	ENSMFAG00000046349	CNOT4	100	99.476	Macaca_fascicularis
ENSSSCG00000021354	CNOT4	100	99.478	ENSMMUG00000016181	CNOT4	100	99.478	Macaca_mulatta
ENSSSCG00000021354	CNOT4	100	99.476	ENSMNEG00000042164	CNOT4	100	99.476	Macaca_nemestrina
ENSSSCG00000021354	CNOT4	100	99.476	ENSMLEG00000032709	CNOT4	100	99.476	Mandrillus_leucophaeus
ENSSSCG00000021354	CNOT4	98	90.566	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSSSCG00000021354	CNOT4	98	90.566	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSSSCG00000021354	CNOT4	100	88.583	ENSMGAG00000011788	CNOT4	100	88.583	Meleagris_gallopavo
ENSSSCG00000021354	CNOT4	100	99.304	ENSMAUG00000020415	Cnot4	100	99.304	Mesocricetus_auratus
ENSSSCG00000021354	CNOT4	100	99.826	ENSMICG00000001667	CNOT4	100	99.826	Microcebus_murinus
ENSSSCG00000021354	CNOT4	100	99.130	ENSMOCG00000020955	Cnot4	100	99.130	Microtus_ochrogaster
ENSSSCG00000021354	CNOT4	97	76.330	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSSSCG00000021354	CNOT4	100	96.494	ENSMODG00000014068	CNOT4	100	96.494	Monodelphis_domestica
ENSSSCG00000021354	CNOT4	96	90.566	ENSMALG00000011662	cnot4a	64	90.566	Monopterus_albus
ENSSSCG00000021354	CNOT4	100	98.960	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.960	Mus_caroli
ENSSSCG00000021354	CNOT4	100	99.478	ENSMUSG00000038784	Cnot4	100	99.478	Mus_musculus
ENSSSCG00000021354	CNOT4	100	99.130	MGP_PahariEiJ_G0021974	Cnot4	100	99.130	Mus_pahari
ENSSSCG00000021354	CNOT4	100	99.130	MGP_SPRETEiJ_G0029216	Cnot4	100	99.130	Mus_spretus
ENSSSCG00000021354	CNOT4	100	98.738	ENSMPUG00000004089	CNOT4	100	98.738	Mustela_putorius_furo
ENSSSCG00000021354	CNOT4	100	99.221	ENSMLUG00000008260	CNOT4	100	99.221	Myotis_lucifugus
ENSSSCG00000021354	CNOT4	100	99.130	ENSNGAG00000015030	Cnot4	100	99.130	Nannospalax_galili
ENSSSCG00000021354	CNOT4	100	71.579	ENSNBRG00000021144	cnot4a	100	71.429	Neolamprologus_brichardi
ENSSSCG00000021354	CNOT4	100	99.065	ENSNLEG00000013352	CNOT4	100	99.065	Nomascus_leucogenys
ENSSSCG00000021354	CNOT4	88	94.297	ENSOPRG00000001023	CNOT4	90	80.145	Ochotona_princeps
ENSSSCG00000021354	CNOT4	100	98.609	ENSODEG00000012975	CNOT4	100	98.609	Octodon_degus
ENSSSCG00000021354	CNOT4	98	90.566	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSSSCG00000021354	CNOT4	100	95.385	ENSOANG00000005006	CNOT4	100	95.385	Ornithorhynchus_anatinus
ENSSSCG00000021354	CNOT4	100	98.597	ENSOCUG00000013448	CNOT4	100	98.597	Oryctolagus_cuniculus
ENSSSCG00000021354	CNOT4	97	76.427	ENSORLG00000003727	cnot4a	100	72.672	Oryzias_latipes
ENSSSCG00000021354	CNOT4	97	75.862	ENSORLG00020015684	cnot4a	100	72.247	Oryzias_latipes_hni
ENSSSCG00000021354	CNOT4	97	76.427	ENSORLG00015008470	cnot4a	100	72.672	Oryzias_latipes_hsok
ENSSSCG00000021354	CNOT4	100	72.214	ENSOMEG00000011084	cnot4a	100	71.908	Oryzias_melastigma
ENSSSCG00000021354	CNOT4	100	99.439	ENSOGAG00000015499	CNOT4	100	99.439	Otolemur_garnettii
ENSSSCG00000021354	CNOT4	100	98.738	ENSOARG00000008803	CNOT4	100	98.738	Ovis_aries
ENSSSCG00000021354	CNOT4	100	99.130	ENSPPAG00000041937	CNOT4	100	99.130	Pan_paniscus
ENSSSCG00000021354	CNOT4	100	99.826	ENSPPRG00000023940	CNOT4	100	99.826	Panthera_pardus
ENSSSCG00000021354	CNOT4	100	99.825	ENSPTIG00000016601	CNOT4	100	99.825	Panthera_tigris_altaica
ENSSSCG00000021354	CNOT4	100	99.221	ENSPTRG00000019727	CNOT4	100	99.221	Pan_troglodytes
ENSSSCG00000021354	CNOT4	100	99.304	ENSPANG00000017724	CNOT4	100	99.304	Papio_anubis
ENSSSCG00000021354	CNOT4	100	71.981	ENSPKIG00000018137	cnot4a	100	71.672	Paramormyrops_kingsleyae
ENSSSCG00000021354	CNOT4	100	87.942	ENSPSIG00000011256	CNOT4	100	87.942	Pelodiscus_sinensis
ENSSSCG00000021354	CNOT4	100	73.042	ENSPMGG00000005671	cnot4a	100	72.892	Periophthalmus_magnuspinnatus
ENSSSCG00000021354	CNOT4	100	99.130	ENSPEMG00000021566	Cnot4	100	99.130	Peromyscus_maniculatus_bairdii
ENSSSCG00000021354	CNOT4	100	96.417	ENSPCIG00000029622	CNOT4	96	96.073	Phascolarctos_cinereus
ENSSSCG00000021354	CNOT4	59	88.321	ENSPFOG00000002228	cnot4a	100	59.658	Poecilia_formosa
ENSSSCG00000021354	CNOT4	100	73.485	ENSPLAG00000001780	cnot4a	100	72.879	Poecilia_latipinna
ENSSSCG00000021354	CNOT4	100	73.333	ENSPMEG00000006852	cnot4a	100	72.727	Poecilia_mexicana
ENSSSCG00000021354	CNOT4	100	72.061	ENSPREG00000008171	cnot4a	100	70.683	Poecilia_reticulata
ENSSSCG00000021354	CNOT4	100	98.457	ENSPPYG00000018026	CNOT4	100	98.457	Pongo_abelii
ENSSSCG00000021354	CNOT4	100	99.825	ENSPCOG00000019907	CNOT4	100	99.825	Propithecus_coquereli
ENSSSCG00000021354	CNOT4	99	96.763	ENSPVAG00000004905	CNOT4	90	97.246	Pteropus_vampyrus
ENSSSCG00000021354	CNOT4	98	90.566	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSSSCG00000021354	CNOT4	99	93.727	ENSPNAG00000008679	cnot4b	100	74.850	Pygocentrus_nattereri
ENSSSCG00000021354	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	100	71.701	Pygocentrus_nattereri
ENSSSCG00000021354	CNOT4	100	97.195	ENSRNOG00000010795	Cnot4	100	97.195	Rattus_norvegicus
ENSSSCG00000021354	CNOT4	100	99.478	ENSRBIG00000043977	CNOT4	100	99.478	Rhinopithecus_bieti
ENSSSCG00000021354	CNOT4	100	99.301	ENSSBOG00000020808	CNOT4	100	99.301	Saimiri_boliviensis_boliviensis
ENSSSCG00000021354	CNOT4	100	96.353	ENSSHAG00000013639	CNOT4	100	96.353	Sarcophilus_harrisii
ENSSSCG00000021354	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	100	73.065	Scleropages_formosus
ENSSSCG00000021354	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSSSCG00000021354	CNOT4	96	90.566	ENSSMAG00000008614	cnot4a	100	72.331	Scophthalmus_maximus
ENSSSCG00000021354	CNOT4	100	71.121	ENSSDUG00000018585	cnot4b	100	71.121	Seriola_dumerili
ENSSSCG00000021354	CNOT4	98	90.566	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSSSCG00000021354	CNOT4	98	90.566	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSSSCG00000021354	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	100	57.393	Seriola_lalandi_dorsalis
ENSSSCG00000021354	CNOT4	100	95.950	ENSSPUG00000004677	CNOT4	100	95.950	Sphenodon_punctatus
ENSSSCG00000021354	CNOT4	98	90.566	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSSSCG00000021354	CNOT4	100	89.239	ENSTGUG00000009161	CNOT4	100	89.239	Taeniopygia_guttata
ENSSSCG00000021354	CNOT4	97	89.259	ENSTRUG00000016861	cnot4a	100	72.180	Takifugu_rubripes
ENSSSCG00000021354	CNOT4	100	70.890	ENSTNIG00000016000	cnot4a	100	70.054	Tetraodon_nigroviridis
ENSSSCG00000021354	CNOT4	99	93.885	ENSTBEG00000002202	CNOT4	86	94.048	Tupaia_belangeri
ENSSSCG00000021354	CNOT4	99	96.589	ENSTTRG00000005122	CNOT4	90	98.408	Tursiops_truncatus
ENSSSCG00000021354	CNOT4	100	99.826	ENSUAMG00000026759	CNOT4	100	99.826	Ursus_americanus
ENSSSCG00000021354	CNOT4	100	99.826	ENSUMAG00000015351	CNOT4	100	99.826	Ursus_maritimus
ENSSSCG00000021354	CNOT4	100	99.826	ENSVVUG00000006200	CNOT4	100	99.826	Vulpes_vulpes
ENSSSCG00000021354	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSSSCG00000021354	CNOT4	97	72.522	ENSXCOG00000020824	cnot4a	98	71.189	Xiphophorus_couchianus
ENSSSCG00000021354	CNOT4	96	90.566	ENSXMAG00000016984	cnot4a	100	70.981	Xiphophorus_maculatus