EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000021393 (Gene tree)
Gene ID: 100518210
Gene Symbol: TRMT1L
Alias: C1orf25
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 90212 bases
Position: chr9:126302340-126392551
Accession: 100518210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033757	TRM	PF02005.16	1.1e-65	1	2
ENSSSCP00000033757	TRM	PF02005.16	1.1e-65	2	2
ENSSSCP00000023028	TRM	PF02005.16	1.7e-65	1	2
ENSSSCP00000023028	TRM	PF02005.16	1.7e-65	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000029214	TRMT1L-202	3091	-	ENSSSCP00000023028	818 (aa)	-	I3LG35
ENSSSCT00000049159	TRMT1L-201	3832	XM_021102636	ENSSSCP00000033757	757 (aa)	XP_020958295	A0A286ZQK8

Gene Model

Click here to download ENSSSCG00000021393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000021393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000021393	TRMT1L	98	85.658	ENSG00000121486	TRMT1L	95	96.517	Homo_sapiens
ENSSSCG00000021393	TRMT1L	80	61.874	ENSAPOG00000011807	trmt1l	97	58.548	Acanthochromis_polyacanthus
ENSSSCG00000021393	TRMT1L	100	86.375	ENSAMEG00000013538	TRMT1L	99	86.282	Ailuropoda_melanoleuca
ENSSSCG00000021393	TRMT1L	62	65.328	ENSACIG00000012049	trmt1l	94	65.328	Amphilophus_citrinellus
ENSSSCG00000021393	TRMT1L	80	62.885	ENSAOCG00000018112	trmt1l	97	62.480	Amphiprion_ocellaris
ENSSSCG00000021393	TRMT1L	80	61.722	ENSAPEG00000021433	trmt1l	97	61.331	Amphiprion_percula
ENSSSCG00000021393	TRMT1L	82	61.897	ENSATEG00000004573	trmt1l	99	63.802	Anabas_testudineus
ENSSSCG00000021393	TRMT1L	84	73.302	ENSAPLG00000008394	TRMT1L	94	72.072	Anas_platyrhynchos
ENSSSCG00000021393	TRMT1L	87	71.259	ENSACAG00000002342	TRMT1L	94	70.349	Anolis_carolinensis
ENSSSCG00000021393	TRMT1L	98	85.658	ENSANAG00000038162	TRMT1L	99	85.476	Aotus_nancymaae
ENSSSCG00000021393	TRMT1L	84	60.758	ENSACLG00000021625	trmt1l	94	60.758	Astatotilapia_calliptera
ENSSSCG00000021393	TRMT1L	83	61.280	ENSAMXG00000009602	trmt1l	92	61.280	Astyanax_mexicanus
ENSSSCG00000021393	TRMT1L	100	89.272	ENSBTAG00000011285	TRMT1L	99	90.191	Bos_taurus
ENSSSCG00000021393	TRMT1L	98	84.392	ENSCJAG00000005456	TRMT1L	99	83.979	Callithrix_jacchus
ENSSSCG00000021393	TRMT1L	98	84.197	ENSCAFG00000013518	TRMT1L	98	84.088	Canis_familiaris
ENSSSCG00000021393	TRMT1L	98	84.217	ENSCAFG00020015640	TRMT1L	99	84.109	Canis_lupus_dingo
ENSSSCG00000021393	TRMT1L	100	84.056	ENSCHIG00000016522	TRMT1L	99	85.115	Capra_hircus
ENSSSCG00000021393	TRMT1L	98	84.127	ENSTSYG00000010465	TRMT1L	99	83.979	Carlito_syrichta
ENSSSCG00000021393	TRMT1L	67	85.091	ENSCAPG00000012562	TRMT1L	89	85.507	Cavia_aperea
ENSSSCG00000021393	TRMT1L	98	83.533	ENSCPOG00000001567	TRMT1L	99	82.946	Cavia_porcellus
ENSSSCG00000021393	TRMT1L	98	85.263	ENSCCAG00000018699	TRMT1L	99	84.704	Cebus_capucinus
ENSSSCG00000021393	TRMT1L	97	85.960	ENSCATG00000043114	TRMT1L	99	85.128	Cercocebus_atys
ENSSSCG00000021393	TRMT1L	98	66.667	ENSCLAG00000010853	-	98	65.296	Chinchilla_lanigera
ENSSSCG00000021393	TRMT1L	98	84.993	ENSCLAG00000010801	-	99	84.496	Chinchilla_lanigera
ENSSSCG00000021393	TRMT1L	97	85.960	ENSCSAG00000012880	TRMT1L	99	85.128	Chlorocebus_sabaeus
ENSSSCG00000021393	TRMT1L	87	75.294	ENSCPBG00000015694	TRMT1L	91	76.935	Chrysemys_picta_bellii
ENSSSCG00000021393	TRMT1L	97	85.166	ENSCANG00000031107	TRMT1L	99	84.359	Colobus_angolensis_palliatus
ENSSSCG00000021393	TRMT1L	98	79.790	ENSCGRG00001019297	Trmt1l	99	79.487	Cricetulus_griseus_chok1gshd
ENSSSCG00000021393	TRMT1L	98	79.790	ENSCGRG00000005036	Trmt1l	99	79.487	Cricetulus_griseus_crigri
ENSSSCG00000021393	TRMT1L	81	61.538	ENSCSEG00000001248	trmt1l	94	61.538	Cynoglossus_semilaevis
ENSSSCG00000021393	TRMT1L	84	60.530	ENSCVAG00000012274	trmt1l	97	60.530	Cyprinodon_variegatus
ENSSSCG00000021393	TRMT1L	83	59.754	ENSDARG00000042057	trmt1l	94	62.069	Danio_rerio
ENSSSCG00000021393	TRMT1L	100	82.648	ENSDNOG00000005239	TRMT1L	99	82.821	Dasypus_novemcinctus
ENSSSCG00000021393	TRMT1L	88	88.745	ENSDORG00000003298	Trmt1l	99	70.317	Dipodomys_ordii
ENSSSCG00000021393	TRMT1L	70	96.708	ENSETEG00000015895	TRMT1L	83	96.708	Echinops_telfairi
ENSSSCG00000021393	TRMT1L	83	48.336	ENSEBUG00000010301	trmt1l	97	48.336	Eptatretus_burgeri
ENSSSCG00000021393	TRMT1L	100	88.098	ENSEASG00005005551	TRMT1L	99	88.418	Equus_asinus_asinus
ENSSSCG00000021393	TRMT1L	99	89.809	ENSECAG00000020999	TRMT1L	95	90.089	Equus_caballus
ENSSSCG00000021393	TRMT1L	79	90.265	ENSEEUG00000014110	TRMT1L	87	88.793	Erinaceus_europaeus
ENSSSCG00000021393	TRMT1L	81	63.050	ENSELUG00000020587	trmt1l	89	63.208	Esox_lucius
ENSSSCG00000021393	TRMT1L	100	86.770	ENSFCAG00000011285	TRMT1L	99	84.217	Felis_catus
ENSSSCG00000021393	TRMT1L	84	71.669	ENSFALG00000003177	TRMT1L	100	71.669	Ficedula_albicollis
ENSSSCG00000021393	TRMT1L	98	84.238	ENSFDAG00000008822	TRMT1L	99	83.613	Fukomys_damarensis
ENSSSCG00000021393	TRMT1L	68	63.216	ENSFHEG00000014328	trmt1l	99	63.216	Fundulus_heteroclitus
ENSSSCG00000021393	TRMT1L	80	61.836	ENSGMOG00000009535	trmt1l	97	61.836	Gadus_morhua
ENSSSCG00000021393	TRMT1L	85	72.036	ENSGALG00000033077	TRMT1L	90	69.723	Gallus_gallus
ENSSSCG00000021393	TRMT1L	83	59.598	ENSGAFG00000012445	trmt1l	93	59.752	Gambusia_affinis
ENSSSCG00000021393	TRMT1L	80	62.141	ENSGACG00000005050	trmt1l	97	63.486	Gasterosteus_aculeatus
ENSSSCG00000021393	TRMT1L	88	73.919	ENSGAGG00000007441	TRMT1L	91	73.919	Gopherus_agassizii
ENSSSCG00000021393	TRMT1L	98	85.000	ENSGGOG00000011778	TRMT1L	99	84.833	Gorilla_gorilla
ENSSSCG00000021393	TRMT1L	84	60.546	ENSHBUG00000000622	trmt1l	96	63.837	Haplochromis_burtoni
ENSSSCG00000021393	TRMT1L	98	79.017	ENSHGLG00000003135	-	99	79.199	Heterocephalus_glaber_female
ENSSSCG00000021393	TRMT1L	98	70.604	ENSHGLG00000012595	-	99	74.319	Heterocephalus_glaber_female
ENSSSCG00000021393	TRMT1L	98	70.604	ENSHGLG00100004569	-	99	74.319	Heterocephalus_glaber_male
ENSSSCG00000021393	TRMT1L	98	83.798	ENSHGLG00100019412	-	99	83.850	Heterocephalus_glaber_male
ENSSSCG00000021393	TRMT1L	82	61.442	ENSIPUG00000008873	trmt1l	99	60.815	Ictalurus_punctatus
ENSSSCG00000021393	TRMT1L	100	84.021	ENSSTOG00000010332	TRMT1L	99	83.933	Ictidomys_tridecemlineatus
ENSSSCG00000021393	TRMT1L	95	80.163	ENSJJAG00000010929	Trmt1l	92	87.462	Jaculus_jaculus
ENSSSCG00000021393	TRMT1L	82	62.359	ENSKMAG00000010310	trmt1l	92	62.359	Kryptolebias_marmoratus
ENSSSCG00000021393	TRMT1L	83	60.775	ENSLBEG00000003487	trmt1l	92	60.775	Labrus_bergylta
ENSSSCG00000021393	TRMT1L	74	61.168	ENSLBEG00000007982	-	92	61.168	Labrus_bergylta
ENSSSCG00000021393	TRMT1L	86	66.269	ENSLACG00000008447	TRMT1L	98	66.567	Latimeria_chalumnae
ENSSSCG00000021393	TRMT1L	89	59.770	ENSLOCG00000001781	trmt1l	96	59.483	Lepisosteus_oculatus
ENSSSCG00000021393	TRMT1L	100	83.549	ENSLAFG00000004339	TRMT1L	99	84.884	Loxodonta_africana
ENSSSCG00000021393	TRMT1L	97	85.828	ENSMFAG00000037592	TRMT1L	99	85.000	Macaca_fascicularis
ENSSSCG00000021393	TRMT1L	97	85.695	ENSMMUG00000013879	TRMT1L	99	84.872	Macaca_mulatta
ENSSSCG00000021393	TRMT1L	97	85.960	ENSMNEG00000041637	TRMT1L	99	85.128	Macaca_nemestrina
ENSSSCG00000021393	TRMT1L	97	85.828	ENSMLEG00000004840	TRMT1L	99	85.000	Mandrillus_leucophaeus
ENSSSCG00000021393	TRMT1L	79	65.116	ENSMAMG00000015305	trmt1l	98	65.116	Mastacembelus_armatus
ENSSSCG00000021393	TRMT1L	84	60.606	ENSMZEG00005017822	trmt1l	94	60.606	Maylandia_zebra
ENSSSCG00000021393	TRMT1L	84	71.516	ENSMGAG00000000930	TRMT1L	99	71.516	Meleagris_gallopavo
ENSSSCG00000021393	TRMT1L	98	76.378	ENSMAUG00000019870	Trmt1l	99	76.410	Mesocricetus_auratus
ENSSSCG00000021393	TRMT1L	98	85.395	ENSMICG00000009494	TRMT1L	99	85.090	Microcebus_murinus
ENSSSCG00000021393	TRMT1L	98	79.735	ENSMOCG00000016453	Trmt1l	99	79.431	Microtus_ochrogaster
ENSSSCG00000021393	TRMT1L	80	61.477	ENSMMOG00000016961	trmt1l	97	60.995	Mola_mola
ENSSSCG00000021393	TRMT1L	91	78.501	ENSMODG00000007454	TRMT1L	82	78.501	Monodelphis_domestica
ENSSSCG00000021393	TRMT1L	84	60.274	ENSMALG00000019306	trmt1l	93	60.274	Monopterus_albus
ENSSSCG00000021393	TRMT1L	100	79.639	MGP_CAROLIEiJ_G0014693	Trmt1l	99	79.434	Mus_caroli
ENSSSCG00000021393	TRMT1L	100	79.897	ENSMUSG00000053286	Trmt1l	99	79.692	Mus_musculus
ENSSSCG00000021393	TRMT1L	100	79.434	MGP_PahariEiJ_G0027929	Trmt1l	99	79.103	Mus_pahari
ENSSSCG00000021393	TRMT1L	89	84.091	MGP_SPRETEiJ_G0015500	Trmt1l	99	84.091	Mus_spretus
ENSSSCG00000021393	TRMT1L	100	82.406	ENSMPUG00000011859	TRMT1L	99	83.484	Mustela_putorius_furo
ENSSSCG00000021393	TRMT1L	85	92.824	ENSMLUG00000001136	TRMT1L	99	84.896	Myotis_lucifugus
ENSSSCG00000021393	TRMT1L	100	78.238	ENSNGAG00000011685	Trmt1l	99	77.519	Nannospalax_galili
ENSSSCG00000021393	TRMT1L	61	63.931	ENSNBRG00000004053	trmt1l	96	61.392	Neolamprologus_brichardi
ENSSSCG00000021393	TRMT1L	98	86.316	ENSNLEG00000018030	TRMT1L	99	85.733	Nomascus_leucogenys
ENSSSCG00000021393	TRMT1L	74	72.263	ENSMEUG00000011344	TRMT1L	85	72.263	Notamacropus_eugenii
ENSSSCG00000021393	TRMT1L	84	76.074	ENSOPRG00000000680	TRMT1L	99	76.074	Ochotona_princeps
ENSSSCG00000021393	TRMT1L	98	78.884	ENSODEG00000000826	TRMT1L	99	76.637	Octodon_degus
ENSSSCG00000021393	TRMT1L	84	60.303	ENSONIG00000007823	trmt1l	100	63.578	Oreochromis_niloticus
ENSSSCG00000021393	TRMT1L	84	75.309	ENSOANG00000001010	TRMT1L	99	75.309	Ornithorhynchus_anatinus
ENSSSCG00000021393	TRMT1L	91	85.206	ENSOCUG00000004896	TRMT1L	99	86.060	Oryctolagus_cuniculus
ENSSSCG00000021393	TRMT1L	79	62.440	ENSORLG00000029610	trmt1l	99	62.603	Oryzias_latipes
ENSSSCG00000021393	TRMT1L	79	62.440	ENSORLG00020002203	trmt1l	91	62.321	Oryzias_latipes_hni
ENSSSCG00000021393	TRMT1L	79	62.279	ENSORLG00015021512	trmt1l	96	59.729	Oryzias_latipes_hsok
ENSSSCG00000021393	TRMT1L	75	60.646	ENSOMEG00000016275	trmt1l	87	60.266	Oryzias_melastigma
ENSSSCG00000021393	TRMT1L	83	81.056	ENSOGAG00000016186	TRMT1L	99	81.056	Otolemur_garnettii
ENSSSCG00000021393	TRMT1L	100	83.525	ENSOARG00000003786	TRMT1L	99	84.841	Ovis_aries
ENSSSCG00000021393	TRMT1L	98	84.605	ENSPPAG00000029141	TRMT1L	99	85.347	Pan_paniscus
ENSSSCG00000021393	TRMT1L	100	86.641	ENSPPRG00000023981	TRMT1L	99	84.088	Panthera_pardus
ENSSSCG00000021393	TRMT1L	100	86.770	ENSPTIG00000021754	TRMT1L	99	84.217	Panthera_tigris_altaica
ENSSSCG00000021393	TRMT1L	98	84.605	ENSPTRG00000001776	TRMT1L	99	85.347	Pan_troglodytes
ENSSSCG00000021393	TRMT1L	97	83.223	ENSPANG00000020890	TRMT1L	99	82.864	Papio_anubis
ENSSSCG00000021393	TRMT1L	81	62.285	ENSPKIG00000005941	trmt1l	89	62.441	Paramormyrops_kingsleyae
ENSSSCG00000021393	TRMT1L	86	73.383	ENSPSIG00000010011	TRMT1L	95	75.734	Pelodiscus_sinensis
ENSSSCG00000021393	TRMT1L	70	58.813	ENSPMGG00000021359	trmt1l	95	58.736	Periophthalmus_magnuspinnatus
ENSSSCG00000021393	TRMT1L	85	87.023	ENSPEMG00000000031	Trmt1l	99	80.491	Peromyscus_maniculatus_bairdii
ENSSSCG00000021393	TRMT1L	80	57.735	ENSPMAG00000005838	trmt1l	100	57.668	Petromyzon_marinus
ENSSSCG00000021393	TRMT1L	94	77.622	ENSPCIG00000002409	TRMT1L	94	79.173	Phascolarctos_cinereus
ENSSSCG00000021393	TRMT1L	81	61.912	ENSPFOG00000003872	trmt1l	99	61.912	Poecilia_formosa
ENSSSCG00000021393	TRMT1L	82	60.465	ENSPLAG00000010387	trmt1l	92	60.465	Poecilia_latipinna
ENSSSCG00000021393	TRMT1L	82	60.465	ENSPMEG00000011828	trmt1l	99	62.273	Poecilia_mexicana
ENSSSCG00000021393	TRMT1L	82	60.465	ENSPREG00000002866	trmt1l	92	60.620	Poecilia_reticulata
ENSSSCG00000021393	TRMT1L	98	85.395	ENSPPYG00000000416	TRMT1L	99	84.833	Pongo_abelii
ENSSSCG00000021393	TRMT1L	85	91.200	ENSPCAG00000008257	TRMT1L	89	91.200	Procavia_capensis
ENSSSCG00000021393	TRMT1L	85	87.701	ENSPCOG00000005682	TRMT1L	93	87.701	Propithecus_coquereli
ENSSSCG00000021393	TRMT1L	100	74.550	ENSPVAG00000005961	TRMT1L	99	75.256	Pteropus_vampyrus
ENSSSCG00000021393	TRMT1L	81	60.315	ENSPNYG00000005607	trmt1l	96	64.007	Pundamilia_nyererei
ENSSSCG00000021393	TRMT1L	81	61.466	ENSPNAG00000004389	trmt1l	89	61.635	Pygocentrus_nattereri
ENSSSCG00000021393	TRMT1L	100	78.995	ENSRNOG00000002580	Trmt1l	99	78.995	Rattus_norvegicus
ENSSSCG00000021393	TRMT1L	97	85.430	ENSRBIG00000042589	TRMT1L	99	84.615	Rhinopithecus_bieti
ENSSSCG00000021393	TRMT1L	97	85.430	ENSRROG00000032183	TRMT1L	99	84.615	Rhinopithecus_roxellana
ENSSSCG00000021393	TRMT1L	100	84.536	ENSSBOG00000029282	TRMT1L	99	84.319	Saimiri_boliviensis_boliviensis
ENSSSCG00000021393	TRMT1L	83	62.481	ENSSFOG00015004878	trmt1l	92	62.481	Scleropages_formosus
ENSSSCG00000021393	TRMT1L	64	57.377	ENSSMAG00000015425	trmt1l	93	63.303	Scophthalmus_maximus
ENSSSCG00000021393	TRMT1L	80	62.758	ENSSDUG00000021807	trmt1l	97	64.587	Seriola_dumerili
ENSSSCG00000021393	TRMT1L	80	61.920	ENSSLDG00000016579	trmt1l	97	64.418	Seriola_lalandi_dorsalis
ENSSSCG00000021393	TRMT1L	61	81.395	ENSSARG00000010135	TRMT1L	87	81.395	Sorex_araneus
ENSSSCG00000021393	TRMT1L	77	77.778	ENSSPUG00000003927	TRMT1L	98	76.768	Sphenodon_punctatus
ENSSSCG00000021393	TRMT1L	80	62.360	ENSSPAG00000008597	trmt1l	91	61.635	Stegastes_partitus
ENSSSCG00000021393	TRMT1L	84	71.561	ENSTGUG00000003737	TRMT1L	96	71.561	Taeniopygia_guttata
ENSSSCG00000021393	TRMT1L	79	59.098	ENSTRUG00000002396	trmt1l	98	55.907	Takifugu_rubripes
ENSSSCG00000021393	TRMT1L	54	64.019	ENSTNIG00000005534	trmt1l	99	64.019	Tetraodon_nigroviridis
ENSSSCG00000021393	TRMT1L	87	80.693	ENSTBEG00000016498	TRMT1L	77	89.807	Tupaia_belangeri
ENSSSCG00000021393	TRMT1L	100	83.526	ENSTTRG00000005892	TRMT1L	99	81.572	Tursiops_truncatus
ENSSSCG00000021393	TRMT1L	100	86.375	ENSUAMG00000020936	TRMT1L	99	86.282	Ursus_americanus
ENSSSCG00000021393	TRMT1L	99	86.229	ENSUMAG00000021919	TRMT1L	98	86.136	Ursus_maritimus
ENSSSCG00000021393	TRMT1L	84	92.037	ENSVPAG00000011854	TRMT1L	100	92.037	Vicugna_pacos
ENSSSCG00000021393	TRMT1L	98	84.088	ENSVVUG00000009166	TRMT1L	99	82.872	Vulpes_vulpes
ENSSSCG00000021393	TRMT1L	70	58.614	ENSXETG00000004539	trmt1l	99	58.614	Xenopus_tropicalis
ENSSSCG00000021393	TRMT1L	77	63.855	ENSXCOG00000007372	trmt1l	92	63.855	Xiphophorus_couchianus
ENSSSCG00000021393	TRMT1L	86	58.041	ENSXMAG00000003575	trmt1l	98	63.559	Xiphophorus_maculatus