EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000021698 (Gene tree)
Gene ID
100621155
Gene Symbol
RRP1B
Alias
KIAA0179|Nnp1|PPP1R136|RRP1
Full Name
ribosomal RNA processing 1B
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
26408 bases
Position
chr13:206629177-206655584
Accession
100621155
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000058005Nop52PF05997.124.5e-6611
ENSSSCP00000052143Nop52PF05997.125e-6611
ENSSSCP00000019280Nop52PF05997.125.6e-6611
ENSSSCP00000051941Nop52PF05997.121.3e-5511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000039036RRP1B-2042473-ENSSSCP00000051941693 (aa)-A0A287B786
ENSSSCT00000028037RRP1B-2016798XM_021071059ENSSSCP00000019280730 (aa)XP_020926718I3L5I1
ENSSSCT00000044219RRP1B-2026651XM_021071068ENSSSCP00000052143681 (aa)XP_020926727A0A287B7Q7
ENSSSCT00000065452RRP1B-2032595-ENSSSCP00000058005654 (aa)-A0A287BPH2
Gene Model
Click here to download ENSSSCG00000021698's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000021698's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000021698RRP1B5750.923ENSSSCG00000037061RRP18352.493
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000021698RRP1B5256.069ENSG00000160214RRP17865.714Homo_sapiens
ENSSSCG00000021698RRP1B10063.588ENSG00000160208RRP1B10063.588Homo_sapiens
ENSSSCG00000021698RRP1B6555.435ENSAPOG00000007490-5047.692Acanthochromis_polyacanthus
ENSSSCG00000021698RRP1B5354.000ENSAMEG00000011448RRP17654.000Ailuropoda_melanoleuca
ENSSSCG00000021698RRP1B7383.333ENSAMEG00000011401RRP1B6883.333Ailuropoda_melanoleuca
ENSSSCG00000021698RRP1B5976.316ENSAOCG00000017894-10055.789Amphiprion_ocellaris
ENSSSCG00000021698RRP1B6552.174ENSAPEG00000024150-5047.692Amphiprion_percula
ENSSSCG00000021698RRP1B6960.000ENSATEG00000005045-5148.305Anabas_testudineus
ENSSSCG00000021698RRP1B9940.188ENSAPLG00000004310RRP1B7854.601Anas_platyrhynchos
ENSSSCG00000021698RRP1B9941.830ENSACAG00000017851RRP1B9541.482Anolis_carolinensis
ENSSSCG00000021698RRP1B10062.187ENSANAG00000034889RRP1B10061.660Aotus_nancymaae
ENSSSCG00000021698RRP1B5253.179ENSANAG00000037815RRP18651.571Aotus_nancymaae
ENSSSCG00000021698RRP1B10065.818ENSBTAG00000017418RRP1B10066.260Bos_taurus
ENSSSCG00000021698RRP1B5750.000ENSBTAG00000003981RRP18149.737Bos_taurus
ENSSSCG00000021698RRP1B10060.686ENSCJAG00000017077RRP1B10060.686Callithrix_jacchus
ENSSSCG00000021698RRP1B5553.005ENSCJAG00000043205RRP17353.005Callithrix_jacchus
ENSSSCG00000021698RRP1B5650.260ENSCAFG00000010646RRP18547.561Canis_familiaris
ENSSSCG00000021698RRP1B9962.588ENSCAFG00000010621RRP1B9962.588Canis_familiaris
ENSSSCG00000021698RRP1B10064.209ENSCAFG00020018901RRP1B10064.209Canis_lupus_dingo
ENSSSCG00000021698RRP1B5650.260ENSCAFG00020018979RRP18052.162Canis_lupus_dingo
ENSSSCG00000021698RRP1B5748.421ENSCHIG00000020948RRP18349.604Capra_hircus
ENSSSCG00000021698RRP1B10066.846ENSCHIG00000021519RRP1B10065.638Capra_hircus
ENSSSCG00000021698RRP1B10056.199ENSCPOG00000002396RRP1B10054.692Cavia_porcellus
ENSSSCG00000021698RRP1B6246.699ENSCPOG00000038986RRP18349.081Cavia_porcellus
ENSSSCG00000021698RRP1B10062.137ENSCCAG00000029384RRP1B10062.137Cebus_capucinus
ENSSSCG00000021698RRP1B6150.000ENSCCAG00000029828RRP17753.005Cebus_capucinus
ENSSSCG00000021698RRP1B5353.179ENSCATG00000015632RRP18153.125Cercocebus_atys
ENSSSCG00000021698RRP1B10062.533ENSCATG00000017423RRP1B10062.533Cercocebus_atys
ENSSSCG00000021698RRP1B10056.371ENSCLAG00000005622RRP1B10056.628Chinchilla_lanigera
ENSSSCG00000021698RRP1B5651.070ENSCLAG00000011639RRP18051.070Chinchilla_lanigera
ENSSSCG00000021698RRP1B10062.665ENSCSAG00000007961RRP1B10062.665Chlorocebus_sabaeus
ENSSSCG00000021698RRP1B5162.798ENSCHOG00000002426-5562.798Choloepus_hoffmanni
ENSSSCG00000021698RRP1B9945.584ENSCPBG00000010310RRP1B9944.567Chrysemys_picta_bellii
ENSSSCG00000021698RRP1B6033.666ENSCING00000003304-7434.844Ciona_intestinalis
ENSSSCG00000021698RRP1B10062.797ENSCANG00000040952RRP1B10062.797Colobus_angolensis_palliatus
ENSSSCG00000021698RRP1B10055.232ENSCGRG00001010889-10055.232Cricetulus_griseus_chok1gshd
ENSSSCG00000021698RRP1B5650.538ENSCGRG00001011920Rrp18250.532Cricetulus_griseus_chok1gshd
ENSSSCG00000021698RRP1B10054.967ENSCGRG00001023882-10054.967Cricetulus_griseus_chok1gshd
ENSSSCG00000021698RRP1B9953.997ENSCGRG00000001553Rrp1b9753.997Cricetulus_griseus_crigri
ENSSSCG00000021698RRP1B5650.538ENSCGRG00000008915Rrp18250.532Cricetulus_griseus_crigri
ENSSSCG00000021698RRP1B6949.515ENSCSEG00000020711-7954.545Cynoglossus_semilaevis
ENSSSCG00000021698RRP1B5643.243ENSCVAG00000017568-9443.243Cyprinodon_variegatus
ENSSSCG00000021698RRP1B6445.266ENSDARG00000103337rrp16544.199Danio_rerio
ENSSSCG00000021698RRP1B6049.624ENSDNOG00000019880RRP18350.392Dasypus_novemcinctus
ENSSSCG00000021698RRP1B10060.157ENSDNOG00000032774RRP1B10060.630Dasypus_novemcinctus
ENSSSCG00000021698RRP1B9850.708ENSDORG00000005496Rrp1b10051.061Dipodomys_ordii
ENSSSCG00000021698RRP1B9979.762ENSETEG00000019489RRP1B9179.762Echinops_telfairi
ENSSSCG00000021698RRP1B5550.000ENSEASG00005001673RRP18051.923Equus_asinus_asinus
ENSSSCG00000021698RRP1B10067.989ENSEASG00005001687RRP1B10067.328Equus_asinus_asinus
ENSSSCG00000021698RRP1B10068.254ENSECAG00000018018RRP1B10067.593Equus_caballus
ENSSSCG00000021698RRP1B5550.964ENSECAG00000015703RRP18052.473Equus_caballus
ENSSSCG00000021698RRP1B6659.770ENSELUG00000015885-9145.000Esox_lucius
ENSSSCG00000021698RRP1B5553.591ENSFCAG00000008434RRP17853.591Felis_catus
ENSSSCG00000021698RRP1B10063.867ENSFCAG00000010272RRP1B10062.834Felis_catus
ENSSSCG00000021698RRP1B5366.265ENSFALG00000002024RRP1B5566.265Ficedula_albicollis
ENSSSCG00000021698RRP1B9956.403ENSFDAG00000010899RRP1B9655.634Fukomys_damarensis
ENSSSCG00000021698RRP1B6446.209ENSFDAG00000013728RRP18049.864Fukomys_damarensis
ENSSSCG00000021698RRP1B6743.704ENSFHEG00000016314-5349.474Fundulus_heteroclitus
ENSSSCG00000021698RRP1B6558.824ENSGMOG00000001953-6558.824Gadus_morhua
ENSSSCG00000021698RRP1B10041.997ENSGALG00000035696RRP1B8255.707Gallus_gallus
ENSSSCG00000021698RRP1B6556.471ENSGACG00000001438rrp16756.471Gasterosteus_aculeatus
ENSSSCG00000021698RRP1B10044.814ENSGAGG00000000375RRP1B6065.000Gopherus_agassizii
ENSSSCG00000021698RRP1B5256.358ENSGGOG00000000173RRP18053.968Gorilla_gorilla
ENSSSCG00000021698RRP1B10063.220ENSGGOG00000012069RRP1B10063.220Gorilla_gorilla
ENSSSCG00000021698RRP1B9957.086ENSHGLG00000004968RRP1B10057.507Heterocephalus_glaber_female
ENSSSCG00000021698RRP1B5251.765ENSHGLG00000017085RRP17750.678Heterocephalus_glaber_female
ENSSSCG00000021698RRP1B8557.746ENSHGLG00100002232RRP1B8958.912Heterocephalus_glaber_male
ENSSSCG00000021698RRP1B6548.936ENSHCOG00000018388-5648.936Hippocampus_comes
ENSSSCG00000021698RRP1B5963.333ENSIPUG00000000673-7541.117Ictalurus_punctatus
ENSSSCG00000021698RRP1B9958.950ENSSTOG00000011790RRP1B9659.254Ictidomys_tridecemlineatus
ENSSSCG00000021698RRP1B6349.279ENSSTOG00000011116RRP18052.762Ictidomys_tridecemlineatus
ENSSSCG00000021698RRP1B10053.543ENSJJAG00000021279Rrp1b10052.756Jaculus_jaculus
ENSSSCG00000021698RRP1B5550.559ENSJJAG00000018886Rrp18250.541Jaculus_jaculus
ENSSSCG00000021698RRP1B6254.762ENSKMAG00000005539rrp16854.762Kryptolebias_marmoratus
ENSSSCG00000021698RRP1B5341.644ENSLBEG00000021417RRP19742.051Labrus_bergylta
ENSSSCG00000021698RRP1B6953.659ENSLACG00000017332-6651.499Latimeria_chalumnae
ENSSSCG00000021698RRP1B6459.302ENSLOCG00000004064-10037.908Lepisosteus_oculatus
ENSSSCG00000021698RRP1B5551.781ENSLAFG00000022901RRP18251.781Loxodonta_africana
ENSSSCG00000021698RRP1B9254.235ENSLAFG00000000766RRP1B9463.636Loxodonta_africana
ENSSSCG00000021698RRP1B10062.533ENSMFAG00000039152RRP1B10062.533Macaca_fascicularis
ENSSSCG00000021698RRP1B5254.942ENSMFAG00000003202RRP18053.581Macaca_fascicularis
ENSSSCG00000021698RRP1B10060.238ENSMMUG00000000104RRP1B10060.238Macaca_mulatta
ENSSSCG00000021698RRP1B5255.233ENSMMUG00000012304RRP18053.846Macaca_mulatta
ENSSSCG00000021698RRP1B10062.401ENSMNEG00000034269RRP1B10062.401Macaca_nemestrina
ENSSSCG00000021698RRP1B5254.942ENSMNEG00000031210RRP18053.581Macaca_nemestrina
ENSSSCG00000021698RRP1B9960.979ENSMLEG00000040044RRP1B9960.979Mandrillus_leucophaeus
ENSSSCG00000021698RRP1B6663.750ENSMGAG00000014591RRP1B5863.750Meleagris_gallopavo
ENSSSCG00000021698RRP1B5342.330ENSMAUG00000017653Rrp18041.667Mesocricetus_auratus
ENSSSCG00000021698RRP1B10053.907ENSMAUG00000021508Rrp1b10053.491Mesocricetus_auratus
ENSSSCG00000021698RRP1B10064.439ENSMICG00000004686RRP1B10063.454Microcebus_murinus
ENSSSCG00000021698RRP1B5253.179ENSMICG00000004700RRP18152.459Microcebus_murinus
ENSSSCG00000021698RRP1B10052.249ENSMOCG00000001117Rrp1b10051.720Microtus_ochrogaster
ENSSSCG00000021698RRP1B5538.356ENSMMOG00000019175rrp19238.798Mola_mola
ENSSSCG00000021698RRP1B5254.913ENSMODG00000021036-5155.072Monodelphis_domestica
ENSSSCG00000021698RRP1B10057.461ENSMODG00000021033RRP1B10056.806Monodelphis_domestica
ENSSSCG00000021698RRP1B5943.896ENSMALG00000010310rrp19444.505Monopterus_albus
ENSSSCG00000021698RRP1B10052.800MGP_CAROLIEiJ_G0021376Rrp1b10053.200Mus_caroli
ENSSSCG00000021698RRP1B10051.660ENSMUSG00000058392Rrp1b10052.191Mus_musculus
ENSSSCG00000021698RRP1B10053.067MGP_PahariEiJ_G0023695Rrp1b10053.067Mus_pahari
ENSSSCG00000021698RRP1B6054.878MGP_SPRETEiJ_G0016321Rrp19844.153Mus_spretus
ENSSSCG00000021698RRP1B10052.058MGP_SPRETEiJ_G0022290Rrp1b10052.324Mus_spretus
ENSSSCG00000021698RRP1B5947.368ENSMPUG00000009826RRP19048.055Mustela_putorius_furo
ENSSSCG00000021698RRP1B8856.260ENSMPUG00000009810RRP1B9955.836Mustela_putorius_furo
ENSSSCG00000021698RRP1B9965.654ENSMLUG00000007738RRP1B9965.654Myotis_lucifugus
ENSSSCG00000021698RRP1B5762.996ENSMLUG00000017788RRP18545.622Myotis_lucifugus
ENSSSCG00000021698RRP1B10057.616ENSNGAG00000021073Rrp1b10058.112Nannospalax_galili
ENSSSCG00000021698RRP1B5255.491ENSNLEG00000034734RRP18053.439Nomascus_leucogenys
ENSSSCG00000021698RRP1B10061.111ENSNLEG00000001490RRP1B10061.111Nomascus_leucogenys
ENSSSCG00000021698RRP1B8083.193ENSMEUG00000003226-8983.193Notamacropus_eugenii
ENSSSCG00000021698RRP1B5546.537ENSOPRG00000001319RRP19848.199Ochotona_princeps
ENSSSCG00000021698RRP1B10055.238ENSODEG00000013177RRP1B10053.649Octodon_degus
ENSSSCG00000021698RRP1B9471.084ENSOANG00000006470RRP1B9948.417Ornithorhynchus_anatinus
ENSSSCG00000021698RRP1B5254.572ENSOANG00000006472-9949.185Ornithorhynchus_anatinus
ENSSSCG00000021698RRP1B9956.447ENSOCUG00000025931RRP1B10054.519Oryctolagus_cuniculus
ENSSSCG00000021698RRP1B6853.571ENSORLG00020007199-5753.571Oryzias_latipes_hni
ENSSSCG00000021698RRP1B6753.086ENSORLG00015004425-5452.874Oryzias_latipes_hsok
ENSSSCG00000021698RRP1B6753.571ENSOMEG00000016910-5853.571Oryzias_melastigma
ENSSSCG00000021698RRP1B5649.734ENSOGAG00000006105RRP18250.396Otolemur_garnettii
ENSSSCG00000021698RRP1B9855.589ENSOGAG00000009872RRP1B10055.589Otolemur_garnettii
ENSSSCG00000021698RRP1B9963.727ENSOARG00000011314RRP1B10062.447Ovis_aries
ENSSSCG00000021698RRP1B5051.360ENSOARG00000011434RRP17451.940Ovis_aries
ENSSSCG00000021698RRP1B9961.538ENSPPAG00000035319RRP1B9961.453Pan_paniscus
ENSSSCG00000021698RRP1B5256.069ENSPPAG00000029050RRP17754.918Pan_paniscus
ENSSSCG00000021698RRP1B5553.315ENSPPRG00000010656RRP17952.459Panthera_pardus
ENSSSCG00000021698RRP1B10064.486ENSPPRG00000010356RRP1B10063.454Panthera_pardus
ENSSSCG00000021698RRP1B7683.333ENSPTIG00000016894RRP1B8083.333Panthera_tigris_altaica
ENSSSCG00000021698RRP1B5144.000ENSPTIG00000019473RRP17546.176Panthera_tigris_altaica
ENSSSCG00000021698RRP1B5256.069ENSPTRG00000013962RRP18053.704Pan_troglodytes
ENSSSCG00000021698RRP1B10063.588ENSPTRG00000013958RRP1B10063.588Pan_troglodytes
ENSSSCG00000021698RRP1B10062.665ENSPANG00000011090RRP1B10062.665Papio_anubis
ENSSSCG00000021698RRP1B6050.503ENSPANG00000015097RRP18053.158Papio_anubis
ENSSSCG00000021698RRP1B6859.524ENSPKIG00000003422-5759.524Paramormyrops_kingsleyae
ENSSSCG00000021698RRP1B6565.000ENSPSIG00000008152RRP1B9646.753Pelodiscus_sinensis
ENSSSCG00000021698RRP1B5635.884ENSPMGG00000007512-9136.483Periophthalmus_magnuspinnatus
ENSSSCG00000021698RRP1B10054.328ENSPEMG00000022490Rrp1b10053.476Peromyscus_maniculatus_bairdii
ENSSSCG00000021698RRP1B5152.493ENSPEMG00000018421Rrp18151.791Peromyscus_maniculatus_bairdii
ENSSSCG00000021698RRP1B10057.382ENSPCIG00000015513RRP1B10057.043Phascolarctos_cinereus
ENSSSCG00000021698RRP1B6249.758ENSPCIG00000015523-7555.523Phascolarctos_cinereus
ENSSSCG00000021698RRP1B7552.041ENSPFOG00000007424-6152.041Poecilia_formosa
ENSSSCG00000021698RRP1B5844.531ENSPLAG00000016684-5544.531Poecilia_latipinna
ENSSSCG00000021698RRP1B6852.041ENSPMEG00000007042-5752.041Poecilia_mexicana
ENSSSCG00000021698RRP1B6853.125ENSPREG00000015673-5653.125Poecilia_reticulata
ENSSSCG00000021698RRP1B10063.193ENSPPYG00000011470RRP1B10063.193Pongo_abelii
ENSSSCG00000021698RRP1B5255.780ENSPPYG00000011474RRP18053.704Pongo_abelii
ENSSSCG00000021698RRP1B8977.895ENSPCAG00000013723RRP1B9177.895Procavia_capensis
ENSSSCG00000021698RRP1B5253.582ENSPCOG00000017706RRP18053.117Propithecus_coquereli
ENSSSCG00000021698RRP1B10063.893ENSPCOG00000017927RRP1B10063.137Propithecus_coquereli
ENSSSCG00000021698RRP1B9961.691ENSPVAG00000001436RRP1B9962.566Pteropus_vampyrus
ENSSSCG00000021698RRP1B10055.467ENSRNOG00000001194Rrp1b10055.467Rattus_norvegicus
ENSSSCG00000021698RRP1B5249.570ENSRNOG00000001203Rrp18249.731Rattus_norvegicus
ENSSSCG00000021698RRP1B10059.367ENSRBIG00000041689RRP1B10059.367Rhinopithecus_bieti
ENSSSCG00000021698RRP1B5254.942ENSRBIG00000032082RRP18053.581Rhinopithecus_bieti
ENSSSCG00000021698RRP1B10062.929ENSRROG00000031499RRP1B10062.929Rhinopithecus_roxellana
ENSSSCG00000021698RRP1B5254.942ENSRROG00000039799RRP18053.581Rhinopithecus_roxellana
ENSSSCG00000021698RRP1B9957.143ENSSBOG00000034727RRP1B9957.143Saimiri_boliviensis_boliviensis
ENSSSCG00000021698RRP1B5552.210ENSSBOG00000034689RRP17852.210Saimiri_boliviensis_boliviensis
ENSSSCG00000021698RRP1B10057.012ENSSHAG00000017789RRP1B10056.881Sarcophilus_harrisii
ENSSSCG00000021698RRP1B5050.299ENSSHAG00000010304-9750.599Sarcophilus_harrisii
ENSSSCG00000021698RRP1B5959.036ENSSFOG00015003932-5658.750Scleropages_formosus
ENSSSCG00000021698RRP1B6756.522ENSSMAG00000016847-8742.895Scophthalmus_maximus
ENSSSCG00000021698RRP1B6754.839ENSSDUG00000000551-5054.839Seriola_dumerili
ENSSSCG00000021698RRP1B6754.839ENSSLDG00000002538-5154.839Seriola_lalandi_dorsalis
ENSSSCG00000021698RRP1B8261.268ENSSARG00000003108-7561.268Sorex_araneus
ENSSSCG00000021698RRP1B6453.271ENSSPUG00000002834RRP1B8449.873Sphenodon_punctatus
ENSSSCG00000021698RRP1B6656.044ENSSPAG00000005370-5250.394Stegastes_partitus
ENSSSCG00000021698RRP1B9941.088ENSTGUG00000005926RRP1B6352.615Taeniopygia_guttata
ENSSSCG00000021698RRP1B5444.258ENSTRUG00000017592rrp19944.258Takifugu_rubripes
ENSSSCG00000021698RRP1B6065.385ENSTNIG00000005053rrp16665.385Tetraodon_nigroviridis
ENSSSCG00000021698RRP1B8664.722ENSTBEG00000000422RRP1B9967.160Tupaia_belangeri
ENSSSCG00000021698RRP1B9975.294ENSTTRG00000000723RRP1B9275.294Tursiops_truncatus
ENSSSCG00000021698RRP1B10063.179ENSUAMG00000026765RRP1B10063.279Ursus_americanus
ENSSSCG00000021698RRP1B5150.149ENSUMAG00000025507RRP17650.149Ursus_maritimus
ENSSSCG00000021698RRP1B6284.524ENSUMAG00000025510RRP1B8184.524Ursus_maritimus
ENSSSCG00000021698RRP1B9963.343ENSVVUG00000024509RRP1B9962.640Vulpes_vulpes
ENSSSCG00000021698RRP1B6150.467ENSXETG00000013683rrp1b6850.467Xenopus_tropicalis
ENSSSCG00000021698RRP1B6851.020ENSXMAG00000023123-7143.622Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us