EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000021845 (Gene tree)
Gene ID: 100515946
Gene Symbol: ATXN2L
Alias: A2D|A2lp
Full Name: ataxin 2 like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 13005 bases
Position: chr3:18506052-18519056
Accession: 100515946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043753	PAM2	PF07145.15	2.3e-05	1	1
ENSSSCP00000051073	PAM2	PF07145.15	2.3e-05	1	1
ENSSSCP00000047433	PAM2	PF07145.15	2.4e-05	1	1
ENSSSCP00000020782	PAM2	PF07145.15	2.5e-05	1	1
ENSSSCP00000043547	PAM2	PF07145.15	2.5e-05	1	1
ENSSSCP00000047992	PAM2	PF07145.15	2.8e-05	1	1
ENSSSCP00000043753	LsmAD	PF06741.13	2.9e-17	1	1
ENSSSCP00000051073	LsmAD	PF06741.13	2.9e-17	1	1
ENSSSCP00000047433	LsmAD	PF06741.13	3e-17	1	1
ENSSSCP00000043547	LsmAD	PF06741.13	3.3e-17	1	1
ENSSSCP00000020782	LsmAD	PF06741.13	3.3e-17	1	1
ENSSSCP00000047992	LsmAD	PF06741.13	3.6e-17	1	1
ENSSSCP00000043547	SM-ATX	PF14438.6	2.8e-19	1	1
ENSSSCP00000020782	SM-ATX	PF14438.6	2.8e-19	1	1
ENSSSCP00000047992	SM-ATX	PF14438.6	3.1e-19	1	1
ENSSSCP00000043753	SM-ATX	PF14438.6	1.1e-17	1	1
ENSSSCP00000051073	SM-ATX	PF14438.6	1.1e-17	1	1
ENSSSCP00000047433	SM-ATX	PF14438.6	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000029453	ATXN2L-203	4110	XM_003124511	ENSSSCP00000020782	1045 (aa)	XP_003124559	I3L9R9
ENSSSCT00000060828	ATXN2L-205	4883	XM_021088044	ENSSSCP00000047433	984 (aa)	XP_020943703	A0A287ATM7
ENSSSCT00000050424	ATXN2L-206	4591	XM_005662052	ENSSSCP00000051073	953 (aa)	XP_005662109	A0A287AI98
ENSSSCT00000037339	ATXN2L-202	4810	XM_005662049	ENSSSCP00000047992	1107 (aa)	XP_005662106	A0A287AV57
ENSSSCT00000048591	ATXN2L-204	4803	-	ENSSSCP00000043753	953 (aa)	-	A0A287AI98
ENSSSCT00000063630	ATXN2L-201	4189	-	ENSSSCP00000043547	1039 (aa)	-	A0A287AHN2

Gene Model

Click here to download ENSSSCG00000021845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000021845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000021845	ATXN2L	95	41.414	ENSSSCG00000009834	ATXN2	94	40.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000021845	ATXN2L	100	97.275	ENSG00000168488	ATXN2L	100	100.000	Homo_sapiens
ENSSSCG00000021845	ATXN2L	100	97.388	ENSAMEG00000015502	ATXN2L	99	91.651	Ailuropoda_melanoleuca
ENSSSCG00000021845	ATXN2L	69	37.994	ENSAOCG00000011378	atxn2l	97	43.470	Amphiprion_ocellaris
ENSSSCG00000021845	ATXN2L	56	58.238	ENSAOCG00000002581	-	100	41.811	Amphiprion_ocellaris
ENSSSCG00000021845	ATXN2L	69	37.907	ENSAPEG00000005810	atxn2l	97	43.640	Amphiprion_percula
ENSSSCG00000021845	ATXN2L	89	64.341	ENSATEG00000019382	-	95	43.208	Anabas_testudineus
ENSSSCG00000021845	ATXN2L	95	76.293	ENSACAG00000005425	ATXN2L	100	75.532	Anolis_carolinensis
ENSSSCG00000021845	ATXN2L	99	96.893	ENSANAG00000026257	ATXN2L	99	96.058	Aotus_nancymaae
ENSSSCG00000021845	ATXN2L	95	38.883	ENSACLG00000016900	atxn2l	95	40.160	Astatotilapia_calliptera
ENSSSCG00000021845	ATXN2L	100	97.696	ENSBTAG00000032087	ATXN2L	100	95.962	Bos_taurus
ENSSSCG00000021845	ATXN2L	99	97.087	ENSCJAG00000006251	ATXN2L	100	94.766	Callithrix_jacchus
ENSSSCG00000021845	ATXN2L	99	97.773	ENSCAFG00000017174	ATXN2L	99	97.773	Canis_familiaris
ENSSSCG00000021845	ATXN2L	100	97.805	ENSCAFG00020017576	ATXN2L	100	97.805	Canis_lupus_dingo
ENSSSCG00000021845	ATXN2L	100	97.803	ENSCHIG00000009907	ATXN2L	100	97.803	Capra_hircus
ENSSSCG00000021845	ATXN2L	99	95.873	ENSTSYG00000013854	ATXN2L	97	96.387	Carlito_syrichta
ENSSSCG00000021845	ATXN2L	99	93.968	ENSCPOG00000010521	ATXN2L	99	94.755	Cavia_porcellus
ENSSSCG00000021845	ATXN2L	100	97.065	ENSCCAG00000033928	ATXN2L	100	97.065	Cebus_capucinus
ENSSSCG00000021845	ATXN2L	100	97.170	ENSCATG00000021354	ATXN2L	100	97.056	Cercocebus_atys
ENSSSCG00000021845	ATXN2L	99	93.333	ENSCLAG00000016117	ATXN2L	99	94.172	Chinchilla_lanigera
ENSSSCG00000021845	ATXN2L	95	97.133	ENSCSAG00000006306	ATXN2L	96	97.149	Chlorocebus_sabaeus
ENSSSCG00000021845	ATXN2L	88	74.651	ENSCPBG00000003859	ATXN2L	84	75.390	Chrysemys_picta_bellii
ENSSSCG00000021845	ATXN2L	99	92.063	ENSCANG00000043625	ATXN2L	100	91.125	Colobus_angolensis_palliatus
ENSSSCG00000021845	ATXN2L	100	94.069	ENSCGRG00001017114	Atxn2l	97	94.381	Cricetulus_griseus_chok1gshd
ENSSSCG00000021845	ATXN2L	100	93.861	ENSCGRG00000001500	Atxn2l	99	93.946	Cricetulus_griseus_crigri
ENSSSCG00000021845	ATXN2L	92	63.953	ENSCVAG00000015825	-	97	43.346	Cyprinodon_variegatus
ENSSSCG00000021845	ATXN2L	97	95.937	ENSDNOG00000009821	ATXN2L	79	95.743	Dasypus_novemcinctus
ENSSSCG00000021845	ATXN2L	85	87.994	ENSETEG00000012782	ATXN2L	86	82.219	Echinops_telfairi
ENSSSCG00000021845	ATXN2L	99	96.602	ENSEASG00005014992	ATXN2L	99	96.602	Equus_asinus_asinus
ENSSSCG00000021845	ATXN2L	100	96.845	ENSECAG00000007301	ATXN2L	100	96.845	Equus_caballus
ENSSSCG00000021845	ATXN2L	96	93.311	ENSEEUG00000008940	ATXN2L	96	93.311	Erinaceus_europaeus
ENSSSCG00000021845	ATXN2L	78	65.370	ENSELUG00000022915	-	90	42.111	Esox_lucius
ENSSSCG00000021845	ATXN2L	95	40.914	ENSELUG00000023740	atxn2l	99	42.843	Esox_lucius
ENSSSCG00000021845	ATXN2L	99	97.672	ENSFCAG00000027807	ATXN2L	100	95.331	Felis_catus
ENSSSCG00000021845	ATXN2L	95	84.666	ENSFDAG00000020667	ATXN2L	95	85.062	Fukomys_damarensis
ENSSSCG00000021845	ATXN2L	95	77.646	ENSGAGG00000006078	ATXN2L	95	77.918	Gopherus_agassizii
ENSSSCG00000021845	ATXN2L	97	75.679	ENSGGOG00000036669	-	98	75.679	Gorilla_gorilla
ENSSSCG00000021845	ATXN2L	100	95.119	ENSGGOG00000014112	ATXN2L	99	95.119	Gorilla_gorilla
ENSSSCG00000021845	ATXN2L	95	39.960	ENSHBUG00000013425	atxn2l	99	41.914	Haplochromis_burtoni
ENSSSCG00000021845	ATXN2L	66	62.681	ENSHBUG00000007997	-	86	63.889	Haplochromis_burtoni
ENSSSCG00000021845	ATXN2L	99	93.968	ENSHGLG00000010957	ATXN2L	92	94.747	Heterocephalus_glaber_female
ENSSSCG00000021845	ATXN2L	100	90.000	ENSHGLG00100000705	ATXN2L	100	90.641	Heterocephalus_glaber_male
ENSSSCG00000021845	ATXN2L	95	43.905	ENSIPUG00000001761	atxn2l	96	45.350	Ictalurus_punctatus
ENSSSCG00000021845	ATXN2L	81	95.379	ENSSTOG00000011807	ATXN2L	99	95.349	Ictidomys_tridecemlineatus
ENSSSCG00000021845	ATXN2L	99	94.105	ENSJJAG00000005629	Atxn2l	99	94.206	Jaculus_jaculus
ENSSSCG00000021845	ATXN2L	66	37.216	ENSKMAG00000021450	-	99	44.370	Kryptolebias_marmoratus
ENSSSCG00000021845	ATXN2L	95	64.523	ENSLACG00000006023	ATXN2L	100	62.264	Latimeria_chalumnae
ENSSSCG00000021845	ATXN2L	100	95.639	ENSLAFG00000018143	ATXN2L	98	94.681	Loxodonta_africana
ENSSSCG00000021845	ATXN2L	100	97.275	ENSMFAG00000030590	ATXN2L	100	93.868	Macaca_fascicularis
ENSSSCG00000021845	ATXN2L	100	97.275	ENSMMUG00000003298	ATXN2L	100	93.868	Macaca_mulatta
ENSSSCG00000021845	ATXN2L	100	95.431	ENSMNEG00000032716	ATXN2L	94	96.411	Macaca_nemestrina
ENSSSCG00000021845	ATXN2L	99	95.661	ENSMLEG00000034087	ATXN2L	99	94.874	Mandrillus_leucophaeus
ENSSSCG00000021845	ATXN2L	95	41.886	ENSMAMG00000013005	-	99	42.482	Mastacembelus_armatus
ENSSSCG00000021845	ATXN2L	67	35.319	ENSMAMG00000017977	atxn2l	97	42.705	Mastacembelus_armatus
ENSSSCG00000021845	ATXN2L	92	39.979	ENSMZEG00005001258	atxn2l	94	40.816	Maylandia_zebra
ENSSSCG00000021845	ATXN2L	99	92.812	ENSMAUG00000011753	Atxn2l	92	92.970	Mesocricetus_auratus
ENSSSCG00000021845	ATXN2L	100	96.750	ENSMICG00000010608	ATXN2L	100	96.750	Microcebus_murinus
ENSSSCG00000021845	ATXN2L	100	94.173	ENSMOCG00000020882	Atxn2l	99	94.063	Microtus_ochrogaster
ENSSSCG00000021845	ATXN2L	95	40.363	ENSMMOG00000001440	-	98	41.341	Mola_mola
ENSSSCG00000021845	ATXN2L	98	86.840	ENSMODG00000015570	ATXN2L	98	86.098	Monodelphis_domestica
ENSSSCG00000021845	ATXN2L	67	63.953	ENSMALG00000008430	-	78	61.017	Monopterus_albus
ENSSSCG00000021845	ATXN2L	100	93.965	MGP_CAROLIEiJ_G0030450	Atxn2l	99	93.714	Mus_caroli
ENSSSCG00000021845	ATXN2L	100	93.861	ENSMUSG00000032637	Atxn2l	99	93.714	Mus_musculus
ENSSSCG00000021845	ATXN2L	100	93.861	MGP_PahariEiJ_G0013660	Atxn2l	99	93.714	Mus_pahari
ENSSSCG00000021845	ATXN2L	100	93.757	MGP_SPRETEiJ_G0031564	Atxn2l	99	93.597	Mus_spretus
ENSSSCG00000021845	ATXN2L	95	95.925	ENSMPUG00000012807	ATXN2L	100	95.887	Mustela_putorius_furo
ENSSSCG00000021845	ATXN2L	100	96.960	ENSMLUG00000009877	ATXN2L	100	94.134	Myotis_lucifugus
ENSSSCG00000021845	ATXN2L	99	93.975	ENSNGAG00000021446	Atxn2l	99	94.761	Nannospalax_galili
ENSSSCG00000021845	ATXN2L	74	38.910	ENSNBRG00000020833	-	94	41.667	Neolamprologus_brichardi
ENSSSCG00000021845	ATXN2L	96	69.431	ENSNLEG00000033414	-	96	69.026	Nomascus_leucogenys
ENSSSCG00000021845	ATXN2L	100	95.046	ENSNLEG00000011004	ATXN2L	99	94.221	Nomascus_leucogenys
ENSSSCG00000021845	ATXN2L	98	86.126	ENSMEUG00000011098	ATXN2L	92	85.404	Notamacropus_eugenii
ENSSSCG00000021845	ATXN2L	99	91.323	ENSOPRG00000002270	-	93	92.788	Ochotona_princeps
ENSSSCG00000021845	ATXN2L	93	42.378	ENSONIG00000009388	atxn2l	100	42.987	Oreochromis_niloticus
ENSSSCG00000021845	ATXN2L	95	73.662	ENSOANG00000013115	ATXN2L	92	78.157	Ornithorhynchus_anatinus
ENSSSCG00000021845	ATXN2L	95	96.806	ENSOCUG00000002677	ATXN2L	100	96.947	Oryctolagus_cuniculus
ENSSSCG00000021845	ATXN2L	68	64.062	ENSOMEG00000021118	-	99	42.002	Oryzias_melastigma
ENSSSCG00000021845	ATXN2L	99	96.709	ENSOGAG00000012596	ATXN2L	94	96.709	Otolemur_garnettii
ENSSSCG00000021845	ATXN2L	92	96.825	ENSOARG00000002503	ATXN2L	100	95.939	Ovis_aries
ENSSSCG00000021845	ATXN2L	100	93.769	ENSPPAG00000039107	ATXN2L	100	96.966	Pan_paniscus
ENSSSCG00000021845	ATXN2L	97	74.703	ENSPPAG00000036236	-	98	75.127	Pan_paniscus
ENSSSCG00000021845	ATXN2L	99	97.672	ENSPPRG00000013690	ATXN2L	100	95.331	Panthera_pardus
ENSSSCG00000021845	ATXN2L	99	95.584	ENSPTIG00000015041	ATXN2L	94	94.256	Panthera_tigris_altaica
ENSSSCG00000021845	ATXN2L	100	97.170	ENSPTRG00000007938	ATXN2L	100	94.134	Pan_troglodytes
ENSSSCG00000021845	ATXN2L	99	93.895	ENSPANG00000018770	ATXN2L	97	92.640	Papio_anubis
ENSSSCG00000021845	ATXN2L	82	66.790	ENSPKIG00000018462	-	89	62.342	Paramormyrops_kingsleyae
ENSSSCG00000021845	ATXN2L	95	76.566	ENSPSIG00000004866	ATXN2L	100	76.882	Pelodiscus_sinensis
ENSSSCG00000021845	ATXN2L	67	61.328	ENSPMGG00000014821	-	93	54.875	Periophthalmus_magnuspinnatus
ENSSSCG00000021845	ATXN2L	100	94.173	ENSPEMG00000019231	Atxn2l	100	92.998	Peromyscus_maniculatus_bairdii
ENSSSCG00000021845	ATXN2L	98	88.413	ENSPCIG00000025207	ATXN2L	98	87.852	Phascolarctos_cinereus
ENSSSCG00000021845	ATXN2L	100	96.558	ENSPPYG00000025917	ATXN2L	100	96.558	Pongo_abelii
ENSSSCG00000021845	ATXN2L	89	77.347	ENSPPYG00000017765	-	95	76.906	Pongo_abelii
ENSSSCG00000021845	ATXN2L	62	100.000	ENSPCAG00000015179	ATXN2L	63	100.000	Procavia_capensis
ENSSSCG00000021845	ATXN2L	100	95.938	ENSPCOG00000024791	ATXN2L	98	92.955	Propithecus_coquereli
ENSSSCG00000021845	ATXN2L	99	86.984	ENSPVAG00000003958	ATXN2L	92	88.305	Pteropus_vampyrus
ENSSSCG00000021845	ATXN2L	68	62.782	ENSPNYG00000012482	atxn2l	94	49.020	Pundamilia_nyererei
ENSSSCG00000021845	ATXN2L	96	40.888	ENSPNAG00000014538	atxn2l	99	45.914	Pygocentrus_nattereri
ENSSSCG00000021845	ATXN2L	86	46.263	ENSPNAG00000023685	-	84	46.899	Pygocentrus_nattereri
ENSSSCG00000021845	ATXN2L	100	94.555	ENSRNOG00000018686	Atxn2l	98	90.625	Rattus_norvegicus
ENSSSCG00000021845	ATXN2L	100	85.358	ENSRBIG00000036712	ATXN2L	99	83.563	Rhinopithecus_bieti
ENSSSCG00000021845	ATXN2L	100	97.275	ENSRROG00000028547	ATXN2L	100	94.043	Rhinopithecus_roxellana
ENSSSCG00000021845	ATXN2L	100	95.950	ENSSBOG00000025782	ATXN2L	100	97.183	Saimiri_boliviensis_boliviensis
ENSSSCG00000021845	ATXN2L	95	89.572	ENSSHAG00000012015	ATXN2L	98	89.595	Sarcophilus_harrisii
ENSSSCG00000021845	ATXN2L	96	42.095	ENSSFOG00015001018	atxn2l	98	42.064	Scleropages_formosus
ENSSSCG00000021845	ATXN2L	81	40.167	ENSSMAG00000016365	atxn2l	95	42.757	Scophthalmus_maximus
ENSSSCG00000021845	ATXN2L	70	62.454	ENSSDUG00000023014	-	97	43.470	Seriola_dumerili
ENSSSCG00000021845	ATXN2L	98	94.765	ENSSARG00000009732	ATXN2L	97	94.765	Sorex_araneus
ENSSSCG00000021845	ATXN2L	95	77.170	ENSSPUG00000016297	ATXN2L	93	78.234	Sphenodon_punctatus
ENSSSCG00000021845	ATXN2L	68	62.362	ENSSPAG00000008174	-	95	43.123	Stegastes_partitus
ENSSSCG00000021845	ATXN2L	95	41.926	ENSSPAG00000015698	atxn2l	95	43.868	Stegastes_partitus
ENSSSCG00000021845	ATXN2L	58	97.153	ENSTBEG00000014435	-	56	97.153	Tupaia_belangeri
ENSSSCG00000021845	ATXN2L	99	93.981	ENSTTRG00000005913	ATXN2L	93	97.597	Tursiops_truncatus
ENSSSCG00000021845	ATXN2L	100	97.612	ENSUAMG00000001462	ATXN2L	100	97.612	Ursus_americanus
ENSSSCG00000021845	ATXN2L	100	94.277	ENSUMAG00000009437	ATXN2L	98	98.540	Ursus_maritimus
ENSSSCG00000021845	ATXN2L	61	98.280	ENSVPAG00000009539	-	60	98.368	Vicugna_pacos
ENSSSCG00000021845	ATXN2L	100	94.838	ENSVVUG00000024239	ATXN2L	100	97.946	Vulpes_vulpes
ENSSSCG00000021845	ATXN2L	96	61.170	ENSXETG00000014990	atxn2l	96	61.641	Xenopus_tropicalis
ENSSSCG00000021845	ATXN2L	70	62.745	ENSXCOG00000001128	-	80	62.745	Xiphophorus_couchianus
ENSSSCG00000021845	ATXN2L	57	33.284	ENSXMAG00000010133	-	97	42.557	Xiphophorus_maculatus