EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000022423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 23272 bases
Position: chr6:46259501-46282772
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	1	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	2	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	3	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	4	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	5	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	6	7
ENSSSCP00000024664	zf-C2H2	PF00096.26	8e-44	7	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	1	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	2	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	3	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	4	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	5	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	6	7
ENSSSCP00000039445	zf-C2H2	PF00096.26	9.6e-44	7	7
ENSSSCP00000024664	zf-met	PF12874.7	9.5e-11	1	1
ENSSSCP00000039445	zf-met	PF12874.7	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052694	-	3654	-	ENSSSCP00000039445	367 (aa)	-	A0A287A6E7
ENSSSCT00000030595	-	1868	-	ENSSSCP00000024664	361 (aa)	-	I3LKP9

Gene Model

Click here to download ENSSSCG00000022423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000022423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000022423	-	90	49.802	ENSSSCG00000040389	-	99	49.802
ENSSSCG00000022423	-	90	46.522	ENSSSCG00000039774	-	99	46.522
ENSSSCG00000022423	-	90	39.316	ENSSSCG00000036608	-	99	39.316
ENSSSCG00000022423	-	92	44.161	ENSSSCG00000008117	ZNF2	91	44.161
ENSSSCG00000022423	-	90	56.809	ENSSSCG00000003077	ZNF112	99	56.809
ENSSSCG00000022423	-	94	50.554	ENSSSCG00000003322	-	70	46.957
ENSSSCG00000022423	-	90	56.098	ENSSSCG00000003076	ZNF226	93	56.098
ENSSSCG00000022423	-	93	57.422	ENSSSCG00000022434	ZNF235	67	57.422

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000022423	-	90	49.780	ENSG00000185869	ZNF829	92	49.780	Homo_sapiens
ENSSSCG00000022423	-	91	49.802	ENSANAG00000034549	ZNF829	94	49.802	Aotus_nancymaae
ENSSSCG00000022423	-	71	89.641	ENSBTAG00000038869	ZNF383	58	89.641	Bos_taurus
ENSSSCG00000022423	-	72	89.641	ENSCHIG00000016562	-	60	89.641	Capra_hircus
ENSSSCG00000022423	-	92	50.593	ENSTSYG00000036894	ZNF829	95	50.593	Carlito_syrichta
ENSSSCG00000022423	-	91	49.780	ENSCATG00000003472	ZNF829	78	49.780	Cercocebus_atys
ENSSSCG00000022423	-	91	49.801	ENSCANG00000012110	ZNF829	93	49.801	Colobus_angolensis_palliatus
ENSSSCG00000022423	-	90	49.780	ENSGGOG00000041538	-	92	49.780	Gorilla_gorilla
ENSSSCG00000022423	-	90	49.780	ENSGGOG00000025872	-	92	49.780	Gorilla_gorilla
ENSSSCG00000022423	-	91	49.780	ENSMFAG00000030846	ZNF829	78	49.780	Macaca_fascicularis
ENSSSCG00000022423	-	91	49.780	ENSMMUG00000015835	ZNF829	78	49.780	Macaca_mulatta
ENSSSCG00000022423	-	91	49.339	ENSMNEG00000040975	ZNF829	93	49.339	Macaca_nemestrina
ENSSSCG00000022423	-	91	49.780	ENSMLEG00000033785	ZNF829	93	49.780	Mandrillus_leucophaeus
ENSSSCG00000022423	-	91	49.780	ENSMICG00000003417	ZNF829	100	49.780	Microcebus_murinus
ENSSSCG00000022423	-	90	49.801	ENSNLEG00000026641	ZNF829	92	49.801	Nomascus_leucogenys
ENSSSCG00000022423	-	91	50.198	ENSOGAG00000014360	ZNF829	93	50.198	Otolemur_garnettii
ENSSSCG00000022423	-	90	49.780	ENSPPAG00000035225	ZNF829	78	49.780	Pan_paniscus
ENSSSCG00000022423	-	90	49.780	ENSPTRG00000010903	ZNF829	92	49.780	Pan_troglodytes
ENSSSCG00000022423	-	91	49.780	ENSPANG00000020578	ZNF829	79	49.780	Papio_anubis
ENSSSCG00000022423	-	90	50.000	ENSPPYG00000009907	ZNF829	92	50.000	Pongo_abelii
ENSSSCG00000022423	-	91	50.220	ENSRBIG00000027794	ZNF829	93	50.220	Rhinopithecus_bieti
ENSSSCG00000022423	-	91	50.220	ENSRROG00000030120	ZNF829	93	50.220	Rhinopithecus_roxellana
ENSSSCG00000022423	-	91	51.695	ENSSBOG00000027061	ZNF829	98	51.695	Saimiri_boliviensis_boliviensis
ENSSSCG00000022423	-	91	50.220	ENSTBEG00000009878	ZNF829	94	50.220	Tupaia_belangeri