EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000022656 (Gene tree)
Gene ID: 100624712
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 63911 bases
Position: chr2:125507483-125571393
Accession: 100624712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000032724	BUD22	PF09073.10	7.9e-11	1	1
ENSSSCP00000020963	BUD22	PF09073.10	9.7e-11	1	1
ENSSSCP00000058901	BUD22	PF09073.10	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031934	SRFBP1-201	1287	-	ENSSSCP00000020963	428 (aa)	-	I3LA96
ENSSSCT00000040731	SRFBP1-202	4741	XM_021079835	ENSSSCP00000058901	515 (aa)	XP_020935494	A0A287BQV8
ENSSSCT00000038090	SRFBP1-203	1170	-	ENSSSCP00000032724	389 (aa)	-	A0A286ZMP0

Gene Model

Click here to download ENSSSCG00000022656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000022656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000022656	SRFBP1	100	79.720	ENSG00000151304	SRFBP1	100	79.487	Homo_sapiens
ENSSSCG00000022656	SRFBP1	77	59.574	ENSAPOG00000021469	-	83	36.853	Acanthochromis_polyacanthus
ENSSSCG00000022656	SRFBP1	99	82.588	ENSAMEG00000018050	SRFBP1	99	82.588	Ailuropoda_melanoleuca
ENSSSCG00000022656	SRFBP1	99	43.218	ENSACIG00000019127	-	99	43.448	Amphilophus_citrinellus
ENSSSCG00000022656	SRFBP1	74	69.444	ENSAOCG00000002182	-	83	37.602	Amphiprion_ocellaris
ENSSSCG00000022656	SRFBP1	74	69.444	ENSAPEG00000003041	-	84	37.243	Amphiprion_percula
ENSSSCG00000022656	SRFBP1	99	39.024	ENSATEG00000007289	-	85	38.211	Anabas_testudineus
ENSSSCG00000022656	SRFBP1	99	45.964	ENSACAG00000003779	SRFBP1	99	45.946	Anolis_carolinensis
ENSSSCG00000022656	SRFBP1	99	78.404	ENSANAG00000022485	SRFBP1	99	78.169	Aotus_nancymaae
ENSSSCG00000022656	SRFBP1	99	38.384	ENSACLG00000013909	-	88	39.184	Astatotilapia_calliptera
ENSSSCG00000022656	SRFBP1	79	50.794	ENSAMXG00000040976	srfbp1	92	50.794	Astyanax_mexicanus
ENSSSCG00000022656	SRFBP1	100	83.411	ENSBTAG00000014320	SRFBP1	100	83.411	Bos_taurus
ENSSSCG00000022656	SRFBP1	99	78.638	ENSCJAG00000017177	SRFBP1	99	78.404	Callithrix_jacchus
ENSSSCG00000022656	SRFBP1	100	84.149	ENSCAFG00000000512	SRFBP1	100	84.149	Canis_familiaris
ENSSSCG00000022656	SRFBP1	100	84.149	ENSCAFG00020009389	SRFBP1	100	84.149	Canis_lupus_dingo
ENSSSCG00000022656	SRFBP1	99	76.706	ENSTSYG00000008630	-	100	76.402	Carlito_syrichta
ENSSSCG00000022656	SRFBP1	100	58.015	ENSTSYG00000006869	-	99	57.653	Carlito_syrichta
ENSSSCG00000022656	SRFBP1	100	72.222	ENSCPOG00000004695	SRFBP1	100	72.222	Cavia_porcellus
ENSSSCG00000022656	SRFBP1	99	78.404	ENSCCAG00000032237	-	99	78.169	Cebus_capucinus
ENSSSCG00000022656	SRFBP1	100	79.254	ENSCATG00000040904	SRFBP1	100	80.420	Cercocebus_atys
ENSSSCG00000022656	SRFBP1	100	71.926	ENSCLAG00000003630	SRFBP1	100	71.926	Chinchilla_lanigera
ENSSSCG00000022656	SRFBP1	100	76.690	ENSCSAG00000014636	SRFBP1	100	78.788	Chlorocebus_sabaeus
ENSSSCG00000022656	SRFBP1	100	78.089	ENSCANG00000041298	SRFBP1	100	79.254	Colobus_angolensis_palliatus
ENSSSCG00000022656	SRFBP1	100	69.302	ENSCGRG00001000718	Srfbp1	98	69.838	Cricetulus_griseus_chok1gshd
ENSSSCG00000022656	SRFBP1	96	68.434	ENSCGRG00000010837	Srfbp1	100	69.471	Cricetulus_griseus_crigri
ENSSSCG00000022656	SRFBP1	80	62.698	ENSCSEG00000011789	-	99	41.818	Cynoglossus_semilaevis
ENSSSCG00000022656	SRFBP1	99	39.623	ENSCVAG00000013010	-	97	40.281	Cyprinodon_variegatus
ENSSSCG00000022656	SRFBP1	73	44.366	ENSDARG00000075323	srfbp1	59	44.366	Danio_rerio
ENSSSCG00000022656	SRFBP1	87	76.401	ENSDNOG00000017733	SRFBP1	100	76.401	Dasypus_novemcinctus
ENSSSCG00000022656	SRFBP1	87	67.751	ENSETEG00000012408	SRFBP1	100	67.456	Echinops_telfairi
ENSSSCG00000022656	SRFBP1	80	48.462	ENSEBUG00000007806	SRFBP1	58	48.462	Eptatretus_burgeri
ENSSSCG00000022656	SRFBP1	100	86.682	ENSEASG00005012421	SRFBP1	100	86.682	Equus_asinus_asinus
ENSSSCG00000022656	SRFBP1	100	86.215	ENSECAG00000015330	SRFBP1	100	86.215	Equus_caballus
ENSSSCG00000022656	SRFBP1	100	70.396	ENSEEUG00000011514	SRFBP1	100	70.396	Erinaceus_europaeus
ENSSSCG00000022656	SRFBP1	99	37.687	ENSELUG00000018381	-	97	38.116	Esox_lucius
ENSSSCG00000022656	SRFBP1	100	84.813	ENSFCAG00000035118	SRFBP1	100	84.813	Felis_catus
ENSSSCG00000022656	SRFBP1	100	39.318	ENSFALG00000007595	SRFBP1	100	43.409	Ficedula_albicollis
ENSSSCG00000022656	SRFBP1	100	69.977	ENSFDAG00000005102	SRFBP1	100	69.977	Fukomys_damarensis
ENSSSCG00000022656	SRFBP1	99	34.969	ENSFHEG00000000477	-	85	35.451	Fundulus_heteroclitus
ENSSSCG00000022656	SRFBP1	99	44.091	ENSGALG00000005316	SRFBP1	99	45.000	Gallus_gallus
ENSSSCG00000022656	SRFBP1	99	38.115	ENSGAFG00000018777	-	63	59.055	Gambusia_affinis
ENSSSCG00000022656	SRFBP1	99	41.743	ENSGACG00000009055	-	83	42.212	Gasterosteus_aculeatus
ENSSSCG00000022656	SRFBP1	100	42.958	ENSGAGG00000024915	SRFBP1	99	46.838	Gopherus_agassizii
ENSSSCG00000022656	SRFBP1	100	80.186	ENSGGOG00000007725	SRFBP1	100	79.720	Gorilla_gorilla
ENSSSCG00000022656	SRFBP1	85	48.214	ENSIPUG00000014640	srfbp1	87	61.290	Ictalurus_punctatus
ENSSSCG00000022656	SRFBP1	100	75.349	ENSSTOG00000029184	SRFBP1	99	74.713	Ictidomys_tridecemlineatus
ENSSSCG00000022656	SRFBP1	96	65.144	ENSJJAG00000013229	Srfbp1	100	65.617	Jaculus_jaculus
ENSSSCG00000022656	SRFBP1	87	36.695	ENSLACG00000004456	SRFBP1	100	37.255	Latimeria_chalumnae
ENSSSCG00000022656	SRFBP1	99	43.478	ENSLOCG00000008772	SRFBP1	100	42.325	Lepisosteus_oculatus
ENSSSCG00000022656	SRFBP1	100	79.535	ENSLAFG00000015303	SRFBP1	98	79.535	Loxodonta_africana
ENSSSCG00000022656	SRFBP1	100	79.021	ENSMFAG00000031263	SRFBP1	100	80.186	Macaca_fascicularis
ENSSSCG00000022656	SRFBP1	100	79.021	ENSMMUG00000021009	SRFBP1	100	80.186	Macaca_mulatta
ENSSSCG00000022656	SRFBP1	100	79.021	ENSMNEG00000040870	SRFBP1	100	80.186	Macaca_nemestrina
ENSSSCG00000022656	SRFBP1	99	38.323	ENSMAMG00000004632	-	87	39.841	Mastacembelus_armatus
ENSSSCG00000022656	SRFBP1	99	38.934	ENSMZEG00005000432	-	88	39.752	Maylandia_zebra
ENSSSCG00000022656	SRFBP1	97	68.585	ENSMAUG00000009431	Srfbp1	95	68.900	Mesocricetus_auratus
ENSSSCG00000022656	SRFBP1	100	79.021	ENSMICG00000042923	SRFBP1	100	78.788	Microcebus_murinus
ENSSSCG00000022656	SRFBP1	99	67.757	ENSMOCG00000006206	Srfbp1	97	67.757	Microtus_ochrogaster
ENSSSCG00000022656	SRFBP1	99	36.247	ENSMMOG00000021202	-	98	38.105	Mola_mola
ENSSSCG00000022656	SRFBP1	100	58.065	ENSMODG00000013487	-	99	58.065	Monodelphis_domestica
ENSSSCG00000022656	SRFBP1	99	35.306	ENSMALG00000001812	-	89	36.346	Monopterus_albus
ENSSSCG00000022656	SRFBP1	100	66.744	MGP_CAROLIEiJ_G0022271	Srfbp1	98	66.744	Mus_caroli
ENSSSCG00000022656	SRFBP1	100	66.125	ENSMUSG00000024528	Srfbp1	98	66.125	Mus_musculus
ENSSSCG00000022656	SRFBP1	100	65.741	MGP_PahariEiJ_G0019004	Srfbp1	98	66.051	Mus_pahari
ENSSSCG00000022656	SRFBP1	100	66.125	MGP_SPRETEiJ_G0023184	Srfbp1	98	66.125	Mus_spretus
ENSSSCG00000022656	SRFBP1	96	83.051	ENSMPUG00000013031	SRFBP1	100	82.567	Mustela_putorius_furo
ENSSSCG00000022656	SRFBP1	99	80.751	ENSMLUG00000009984	SRFBP1	100	80.751	Myotis_lucifugus
ENSSSCG00000022656	SRFBP1	99	67.840	ENSNGAG00000013229	Srfbp1	99	68.852	Nannospalax_galili
ENSSSCG00000022656	SRFBP1	99	40.625	ENSNBRG00000001146	-	98	40.848	Neolamprologus_brichardi
ENSSSCG00000022656	SRFBP1	100	80.374	ENSNLEG00000011949	SRFBP1	100	80.374	Nomascus_leucogenys
ENSSSCG00000022656	SRFBP1	67	73.636	ENSOPRG00000003881	-	83	73.636	Ochotona_princeps
ENSSSCG00000022656	SRFBP1	96	70.192	ENSODEG00000007258	SRFBP1	100	69.952	Octodon_degus
ENSSSCG00000022656	SRFBP1	89	46.797	ENSOANG00000010042	-	99	48.800	Ornithorhynchus_anatinus
ENSSSCG00000022656	SRFBP1	100	76.402	ENSOCUG00000009556	SRFBP1	100	74.766	Oryctolagus_cuniculus
ENSSSCG00000022656	SRFBP1	99	35.944	ENSORLG00000014234	-	88	37.006	Oryzias_latipes
ENSSSCG00000022656	SRFBP1	99	39.863	ENSORLG00015000238	-	98	40.816	Oryzias_latipes_hsok
ENSSSCG00000022656	SRFBP1	99	75.410	ENSOGAG00000032423	SRFBP1	99	75.410	Otolemur_garnettii
ENSSSCG00000022656	SRFBP1	100	80.186	ENSPPAG00000035848	SRFBP1	100	79.720	Pan_paniscus
ENSSSCG00000022656	SRFBP1	100	85.280	ENSPPRG00000001695	SRFBP1	100	85.280	Panthera_pardus
ENSSSCG00000022656	SRFBP1	100	84.813	ENSPTIG00000012305	SRFBP1	100	84.813	Panthera_tigris_altaica
ENSSSCG00000022656	SRFBP1	100	79.953	ENSPTRG00000017172	SRFBP1	100	79.487	Pan_troglodytes
ENSSSCG00000022656	SRFBP1	100	80.140	ENSPANG00000003799	SRFBP1	100	80.140	Papio_anubis
ENSSSCG00000022656	SRFBP1	73	76.667	ENSPKIG00000024291	-	79	76.667	Paramormyrops_kingsleyae
ENSSSCG00000022656	SRFBP1	99	48.758	ENSPSIG00000010650	SRFBP1	99	48.533	Pelodiscus_sinensis
ENSSSCG00000022656	SRFBP1	99	39.401	ENSPMGG00000001675	-	99	40.783	Periophthalmus_magnuspinnatus
ENSSSCG00000022656	SRFBP1	100	60.185	ENSPCIG00000028532	SRFBP1	96	59.637	Phascolarctos_cinereus
ENSSSCG00000022656	SRFBP1	99	41.150	ENSPFOG00000005272	-	87	41.463	Poecilia_formosa
ENSSSCG00000022656	SRFBP1	98	38.193	ENSPLAG00000018282	-	63	59.504	Poecilia_latipinna
ENSSSCG00000022656	SRFBP1	98	35.031	ENSPMEG00000020184	-	63	59.504	Poecilia_mexicana
ENSSSCG00000022656	SRFBP1	98	42.056	ENSPREG00000017248	-	98	41.958	Poecilia_reticulata
ENSSSCG00000022656	SRFBP1	100	80.420	ENSPPYG00000015714	SRFBP1	100	79.953	Pongo_abelii
ENSSSCG00000022656	SRFBP1	100	79.953	ENSPCOG00000027331	SRFBP1	100	79.720	Propithecus_coquereli
ENSSSCG00000022656	SRFBP1	58	89.610	ENSPVAG00000017512	-	58	89.610	Pteropus_vampyrus
ENSSSCG00000022656	SRFBP1	99	39.909	ENSPNYG00000010355	-	99	40.991	Pundamilia_nyererei
ENSSSCG00000022656	SRFBP1	69	56.452	ENSPNAG00000029666	srfbp1	90	56.452	Pygocentrus_nattereri
ENSSSCG00000022656	SRFBP1	100	65.747	ENSRNOG00000014808	Srfbp1	99	65.315	Rattus_norvegicus
ENSSSCG00000022656	SRFBP1	97	76.316	ENSRBIG00000031064	SRFBP1	99	76.077	Rhinopithecus_bieti
ENSSSCG00000022656	SRFBP1	100	80.186	ENSRROG00000026932	SRFBP1	100	79.953	Rhinopithecus_roxellana
ENSSSCG00000022656	SRFBP1	99	79.343	ENSSBOG00000015464	-	99	79.108	Saimiri_boliviensis_boliviensis
ENSSSCG00000022656	SRFBP1	100	59.722	ENSSHAG00000016003	SRFBP1	99	59.954	Sarcophilus_harrisii
ENSSSCG00000022656	SRFBP1	99	40.702	ENSSFOG00015001274	srfbp1	99	40.496	Scleropages_formosus
ENSSSCG00000022656	SRFBP1	99	37.597	ENSSMAG00000020630	-	85	37.597	Scophthalmus_maximus
ENSSSCG00000022656	SRFBP1	76	61.905	ENSSDUG00000001828	-	86	38.538	Seriola_dumerili
ENSSSCG00000022656	SRFBP1	100	76.744	ENSSARG00000010669	SRFBP1	100	77.674	Sorex_araneus
ENSSSCG00000022656	SRFBP1	97	44.725	ENSSPUG00000009204	SRFBP1	99	44.444	Sphenodon_punctatus
ENSSSCG00000022656	SRFBP1	74	69.444	ENSSPAG00000010728	-	84	37.165	Stegastes_partitus
ENSSSCG00000022656	SRFBP1	99	39.551	ENSTNIG00000009267	-	98	40.406	Tetraodon_nigroviridis
ENSSSCG00000022656	SRFBP1	81	94.091	ENSTTRG00000007726	SRFBP1	83	94.091	Tursiops_truncatus
ENSSSCG00000022656	SRFBP1	96	85.472	ENSUAMG00000016707	SRFBP1	100	85.472	Ursus_americanus
ENSSSCG00000022656	SRFBP1	97	79.567	ENSUMAG00000018340	SRFBP1	96	79.808	Ursus_maritimus
ENSSSCG00000022656	SRFBP1	100	88.785	ENSVPAG00000005714	SRFBP1	100	88.785	Vicugna_pacos
ENSSSCG00000022656	SRFBP1	100	83.916	ENSVVUG00000019178	SRFBP1	100	83.916	Vulpes_vulpes
ENSSSCG00000022656	SRFBP1	99	43.119	ENSXETG00000004681	srfbp1	99	42.694	Xenopus_tropicalis
ENSSSCG00000022656	SRFBP1	98	37.195	ENSXCOG00000003410	-	98	37.854	Xiphophorus_couchianus