EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000022668 (Gene tree)
Gene ID: 100622002
Gene Symbol: ZFP1
Alias: FLJ34243|ZNF475
Full Name: ZFP1 zinc finger protein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 49348 bases
Position: chr6:12482182-12531529
Accession: 100622002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	1	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	2	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	3	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	4	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	5	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	6	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	7	8
ENSSSCP00000023927	zf-C2H2	PF00096.26	3.2e-53	8	8
ENSSSCP00000023927	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031098	ZFP1-201	2435	XM_005664345	ENSSSCP00000023927	408 (aa)	XP_005664402	I3LIM1

Gene Model

Click here to download ENSSSCG00000022668's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000022668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000022668	ZFP1	99	48.077	ENSSSCG00000027351	ZNF454	98	48.077
ENSSSCG00000022668	ZFP1	99	39.409	ENSSSCG00000032506	ZNF317	86	45.833
ENSSSCG00000022668	ZFP1	75	45.338	ENSSSCG00000029696	-	92	45.338
ENSSSCG00000022668	ZFP1	79	53.333	ENSSSCG00000023349	ZNF768	59	53.097
ENSSSCG00000022668	ZFP1	98	45.399	ENSSSCG00000035876	ZNF599	97	54.867
ENSSSCG00000022668	ZFP1	99	54.000	ENSSSCG00000039774	-	99	54.000
ENSSSCG00000022668	ZFP1	99	58.065	ENSSSCG00000008117	ZNF2	91	58.065
ENSSSCG00000022668	ZFP1	100	46.667	ENSSSCG00000027741	-	97	46.667
ENSSSCG00000022668	ZFP1	98	44.300	ENSSSCG00000029347	-	100	44.300
ENSSSCG00000022668	ZFP1	99	38.571	ENSSSCG00000036608	-	99	42.909
ENSSSCG00000022668	ZFP1	99	43.779	ENSSSCG00000003322	-	96	43.779
ENSSSCG00000022668	ZFP1	99	51.908	ENSSSCG00000038009	-	89	51.908
ENSSSCG00000022668	ZFP1	99	48.052	ENSSSCG00000040389	-	99	55.556
ENSSSCG00000022668	ZFP1	99	44.718	ENSSSCG00000022634	-	94	45.066
ENSSSCG00000022668	ZFP1	99	48.746	ENSSSCG00000031774	-	98	48.746
ENSSSCG00000022668	ZFP1	99	47.561	ENSSSCG00000003077	ZNF112	99	47.561
ENSSSCG00000022668	ZFP1	97	54.237	ENSSSCG00000022434	ZNF235	74	54.237
ENSSSCG00000022668	ZFP1	99	49.834	ENSSSCG00000012283	ZNF81	97	49.834

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000022668	ZFP1	100	91.912	ENSG00000184517	ZFP1	100	91.912	Homo_sapiens
ENSSSCG00000022668	ZFP1	99	93.564	ENSAMEG00000001261	ZFP1	98	93.564	Ailuropoda_melanoleuca
ENSSSCG00000022668	ZFP1	100	92.402	ENSANAG00000028644	ZFP1	100	92.402	Aotus_nancymaae
ENSSSCG00000022668	ZFP1	99	94.802	ENSBTAG00000000868	ZFP1	99	94.802	Bos_taurus
ENSSSCG00000022668	ZFP1	100	92.402	ENSCJAG00000014349	ZFP1	100	92.402	Callithrix_jacchus
ENSSSCG00000022668	ZFP1	100	92.892	ENSCAFG00000020085	ZFP1	100	92.892	Canis_familiaris
ENSSSCG00000022668	ZFP1	99	93.069	ENSCAFG00020001547	ZFP1	98	93.069	Canis_lupus_dingo
ENSSSCG00000022668	ZFP1	100	94.363	ENSCHIG00000015281	ZFP1	100	94.363	Capra_hircus
ENSSSCG00000022668	ZFP1	100	90.931	ENSTSYG00000029077	ZFP1	100	90.931	Carlito_syrichta
ENSSSCG00000022668	ZFP1	98	88.221	ENSCPOG00000000634	ZFP1	99	88.221	Cavia_porcellus
ENSSSCG00000022668	ZFP1	100	91.912	ENSCCAG00000031497	ZFP1	100	91.912	Cebus_capucinus
ENSSSCG00000022668	ZFP1	100	91.912	ENSCATG00000039477	ZFP1	100	91.912	Cercocebus_atys
ENSSSCG00000022668	ZFP1	88	88.827	ENSCLAG00000004223	ZFP1	99	88.827	Chinchilla_lanigera
ENSSSCG00000022668	ZFP1	100	90.931	ENSCSAG00000003718	ZFP1	100	90.931	Chlorocebus_sabaeus
ENSSSCG00000022668	ZFP1	99	85.112	ENSCHOG00000003880	ZFP1	99	85.112	Choloepus_hoffmanni
ENSSSCG00000022668	ZFP1	100	91.912	ENSCANG00000038483	ZFP1	100	91.912	Colobus_angolensis_palliatus
ENSSSCG00000022668	ZFP1	99	89.136	ENSCGRG00001010967	Zfp1	100	89.136	Cricetulus_griseus_chok1gshd
ENSSSCG00000022668	ZFP1	99	88.889	ENSCGRG00000016788	-	100	88.889	Cricetulus_griseus_crigri
ENSSSCG00000022668	ZFP1	89	92.265	ENSDNOG00000006405	-	100	92.265	Dasypus_novemcinctus
ENSSSCG00000022668	ZFP1	87	88.102	ENSDNOG00000010525	-	100	88.102	Dasypus_novemcinctus
ENSSSCG00000022668	ZFP1	99	83.623	ENSDORG00000011934	Zfp1	99	83.623	Dipodomys_ordii
ENSSSCG00000022668	ZFP1	99	94.307	ENSEASG00005013460	ZFP1	98	94.307	Equus_asinus_asinus
ENSSSCG00000022668	ZFP1	99	94.307	ENSECAG00000014727	ZFP1	98	94.307	Equus_caballus
ENSSSCG00000022668	ZFP1	100	92.647	ENSFCAG00000024047	ZFP1	100	92.647	Felis_catus
ENSSSCG00000022668	ZFP1	100	91.422	ENSGGOG00000006121	ZFP1	100	91.422	Gorilla_gorilla
ENSSSCG00000022668	ZFP1	98	90.476	ENSHGLG00000016406	-	99	90.476	Heterocephalus_glaber_female
ENSSSCG00000022668	ZFP1	99	89.223	ENSHGLG00100004688	-	99	89.223	Heterocephalus_glaber_male
ENSSSCG00000022668	ZFP1	91	91.935	ENSSTOG00000022317	ZFP1	100	91.935	Ictidomys_tridecemlineatus
ENSSSCG00000022668	ZFP1	99	86.634	ENSJJAG00000019878	Zfp1	99	87.371	Jaculus_jaculus
ENSSSCG00000022668	ZFP1	99	90.226	ENSLAFG00000003125	ZFP1	100	90.226	Loxodonta_africana
ENSSSCG00000022668	ZFP1	100	91.667	ENSMFAG00000001812	ZFP1	100	91.667	Macaca_fascicularis
ENSSSCG00000022668	ZFP1	100	91.667	ENSMMUG00000011587	ZFP1	100	91.667	Macaca_mulatta
ENSSSCG00000022668	ZFP1	100	91.667	ENSMNEG00000041941	ZFP1	100	91.667	Macaca_nemestrina
ENSSSCG00000022668	ZFP1	100	91.912	ENSMLEG00000021950	ZFP1	100	91.912	Mandrillus_leucophaeus
ENSSSCG00000022668	ZFP1	99	88.500	ENSMAUG00000007745	Zfp1	99	88.500	Mesocricetus_auratus
ENSSSCG00000022668	ZFP1	100	90.931	ENSMICG00000015124	ZFP1	99	90.931	Microcebus_murinus
ENSSSCG00000022668	ZFP1	99	86.284	ENSMOCG00000002761	Zfp1	100	86.284	Microtus_ochrogaster
ENSSSCG00000022668	ZFP1	100	84.938	MGP_CAROLIEiJ_G0031579	Zfp1	100	84.938	Mus_caroli
ENSSSCG00000022668	ZFP1	100	84.444	ENSMUSG00000055835	Zfp1	100	84.444	Mus_musculus
ENSSSCG00000022668	ZFP1	100	84.691	MGP_PahariEiJ_G0023178	Zfp1	100	84.691	Mus_pahari
ENSSSCG00000022668	ZFP1	100	84.691	MGP_SPRETEiJ_G0032697	Zfp1	100	84.691	Mus_spretus
ENSSSCG00000022668	ZFP1	99	91.155	ENSMPUG00000009946	ZFP1	99	91.155	Mustela_putorius_furo
ENSSSCG00000022668	ZFP1	99	91.542	ENSMLUG00000002042	ZFP1	99	91.542	Myotis_lucifugus
ENSSSCG00000022668	ZFP1	99	89.082	ENSNGAG00000016319	Zfp1	98	89.082	Nannospalax_galili
ENSSSCG00000022668	ZFP1	100	92.157	ENSNLEG00000013001	ZFP1	100	92.157	Nomascus_leucogenys
ENSSSCG00000022668	ZFP1	100	84.069	ENSOPRG00000006123	ZFP1	100	84.069	Ochotona_princeps
ENSSSCG00000022668	ZFP1	99	89.303	ENSODEG00000014404	ZFP1	100	89.014	Octodon_degus
ENSSSCG00000022668	ZFP1	99	87.345	ENSOCUG00000001924	ZFP1	100	87.345	Oryctolagus_cuniculus
ENSSSCG00000022668	ZFP1	98	91.771	ENSOGAG00000001902	ZFP1	98	91.771	Otolemur_garnettii
ENSSSCG00000022668	ZFP1	100	94.118	ENSOARG00000006461	ZFP1	100	94.118	Ovis_aries
ENSSSCG00000022668	ZFP1	100	91.422	ENSPPAG00000033168	ZFP1	100	91.422	Pan_paniscus
ENSSSCG00000022668	ZFP1	100	92.647	ENSPPRG00000007804	ZFP1	100	92.647	Panthera_pardus
ENSSSCG00000022668	ZFP1	100	92.157	ENSPTIG00000009843	ZFP1	100	92.157	Panthera_tigris_altaica
ENSSSCG00000022668	ZFP1	100	91.912	ENSPTRG00000008354	ZFP1	100	91.912	Pan_troglodytes
ENSSSCG00000022668	ZFP1	100	91.912	ENSPANG00000016568	ZFP1	100	91.912	Papio_anubis
ENSSSCG00000022668	ZFP1	100	91.422	ENSPPYG00000007556	ZFP1	100	91.422	Pongo_abelii
ENSSSCG00000022668	ZFP1	99	90.323	ENSPCAG00000007561	ZFP1	99	90.323	Procavia_capensis
ENSSSCG00000022668	ZFP1	92	91.200	ENSPCOG00000023041	ZFP1	100	91.200	Propithecus_coquereli
ENSSSCG00000022668	ZFP1	98	84.788	ENSRNOG00000019059	Zfp1	99	84.788	Rattus_norvegicus
ENSSSCG00000022668	ZFP1	100	91.912	ENSRBIG00000039257	ZFP1	100	91.912	Rhinopithecus_bieti
ENSSSCG00000022668	ZFP1	100	91.912	ENSRROG00000042823	ZFP1	100	91.912	Rhinopithecus_roxellana
ENSSSCG00000022668	ZFP1	100	91.422	ENSSBOG00000020206	ZFP1	100	91.422	Saimiri_boliviensis_boliviensis
ENSSSCG00000022668	ZFP1	99	89.630	ENSSARG00000013922	ZFP1	99	89.630	Sorex_araneus
ENSSSCG00000022668	ZFP1	88	90.028	ENSTBEG00000011217	ZFP1	100	90.028	Tupaia_belangeri
ENSSSCG00000022668	ZFP1	99	96.030	ENSTTRG00000008949	ZFP1	99	96.030	Tursiops_truncatus
ENSSSCG00000022668	ZFP1	99	93.069	ENSUAMG00000017632	ZFP1	99	93.069	Ursus_americanus
ENSSSCG00000022668	ZFP1	99	93.069	ENSUMAG00000014322	ZFP1	99	93.069	Ursus_maritimus
ENSSSCG00000022668	ZFP1	88	94.429	ENSVPAG00000012526	ZFP1	99	94.429	Vicugna_pacos
ENSSSCG00000022668	ZFP1	99	93.317	ENSVVUG00000024277	ZFP1	98	93.317	Vulpes_vulpes