EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000022952 (Gene tree)
Gene ID: 100738482
Gene Symbol: NMD3
Alias: CGI-07
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 67356 bases
Position: chr13:100924633-100991988
Accession: 100738482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000047054	NMD3	PF04981.13	2.6e-80	1	1
ENSSSCP00000040537	NMD3	PF04981.13	2.7e-80	1	1
ENSSSCP00000022048	NMD3	PF04981.13	2.8e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000024911	NMD3-201	1800	XM_021069741	ENSSSCP00000022048	525 (aa)	XP_020925400	I3LDB7
ENSSSCT00000048423	NMD3-202	3060	XM_021069744	ENSSSCP00000047054	503 (aa)	XP_020925403	A0A287ASW2
ENSSSCT00000065835	NMD3-203	2712	XM_021069742	ENSSSCP00000040537	507 (aa)	XP_020925401	A0A287A9R6

Gene Model

Click here to download ENSSSCG00000022952's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000022952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000022952	NMD3	100	95.030	ENSG00000169251	NMD3	100	96.129	Homo_sapiens
ENSSSCG00000022952	NMD3	100	76.389	ENSAPOG00000022912	nmd3	99	76.506	Acanthochromis_polyacanthus
ENSSSCG00000022952	NMD3	100	95.635	ENSAMEG00000001584	NMD3	99	95.783	Ailuropoda_melanoleuca
ENSSSCG00000022952	NMD3	100	72.421	ENSACIG00000015196	nmd3	99	72.490	Amphilophus_citrinellus
ENSSSCG00000022952	NMD3	100	76.786	ENSAOCG00000009086	nmd3	99	76.908	Amphiprion_ocellaris
ENSSSCG00000022952	NMD3	100	76.587	ENSAPEG00000000329	nmd3	99	76.707	Amphiprion_percula
ENSSSCG00000022952	NMD3	100	77.381	ENSATEG00000014351	nmd3	99	77.510	Anabas_testudineus
ENSSSCG00000022952	NMD3	100	77.932	ENSAPLG00000014786	NMD3	99	78.068	Anas_platyrhynchos
ENSSSCG00000022952	NMD3	100	82.107	ENSACAG00000007349	NMD3	99	82.495	Anolis_carolinensis
ENSSSCG00000022952	NMD3	99	94.779	ENSANAG00000026434	NMD3	99	94.779	Aotus_nancymaae
ENSSSCG00000022952	NMD3	100	77.579	ENSACLG00000015520	nmd3	99	77.711	Astatotilapia_calliptera
ENSSSCG00000022952	NMD3	100	77.381	ENSAMXG00000014415	nmd3	99	77.510	Astyanax_mexicanus
ENSSSCG00000022952	NMD3	100	95.825	ENSBTAG00000016228	NMD3	100	95.825	Bos_taurus
ENSSSCG00000022952	NMD3	97	50.696	WBGene00012030	T25G3.3	97	50.696	Caenorhabditis_elegans
ENSSSCG00000022952	NMD3	99	94.567	ENSCJAG00000002900	NMD3	97	94.567	Callithrix_jacchus
ENSSSCG00000022952	NMD3	99	94.970	ENSCAFG00000014352	NMD3	97	94.980	Canis_familiaris
ENSSSCG00000022952	NMD3	100	95.030	ENSCAFG00020021145	NMD3	99	95.171	Canis_lupus_dingo
ENSSSCG00000022952	NMD3	100	95.626	ENSCHIG00000016015	NMD3	100	95.626	Capra_hircus
ENSSSCG00000022952	NMD3	100	94.433	ENSTSYG00000002155	NMD3	99	94.769	Carlito_syrichta
ENSSSCG00000022952	NMD3	80	94.250	ENSCAPG00000017861	NMD3	93	94.250	Cavia_aperea
ENSSSCG00000022952	NMD3	87	94.737	ENSCPOG00000005953	NMD3	94	94.737	Cavia_porcellus
ENSSSCG00000022952	NMD3	100	94.632	ENSCCAG00000037460	NMD3	100	94.632	Cebus_capucinus
ENSSSCG00000022952	NMD3	100	95.229	ENSCATG00000030022	NMD3	100	95.229	Cercocebus_atys
ENSSSCG00000022952	NMD3	100	93.042	ENSCLAG00000003155	NMD3	100	93.042	Chinchilla_lanigera
ENSSSCG00000022952	NMD3	100	95.229	ENSCSAG00000012333	NMD3	100	95.229	Chlorocebus_sabaeus
ENSSSCG00000022952	NMD3	80	94.718	ENSCHOG00000001240	NMD3	80	94.718	Choloepus_hoffmanni
ENSSSCG00000022952	NMD3	100	83.698	ENSCPBG00000018318	NMD3	99	85.011	Chrysemys_picta_bellii
ENSSSCG00000022952	NMD3	96	54.806	ENSCING00000002129	-	96	54.806	Ciona_intestinalis
ENSSSCG00000022952	NMD3	87	55.329	ENSCSAVG00000001120	-	97	55.329	Ciona_savignyi
ENSSSCG00000022952	NMD3	99	89.780	ENSCANG00000042939	NMD3	95	89.703	Colobus_angolensis_palliatus
ENSSSCG00000022952	NMD3	100	78.926	ENSCGRG00001001792	Nmd3	100	78.926	Cricetulus_griseus_chok1gshd
ENSSSCG00000022952	NMD3	97	94.274	ENSCGRG00000007947	Nmd3	98	94.444	Cricetulus_griseus_crigri
ENSSSCG00000022952	NMD3	100	76.984	ENSCSEG00000017954	nmd3	99	77.108	Cynoglossus_semilaevis
ENSSSCG00000022952	NMD3	100	70.040	ENSCVAG00000004672	nmd3	99	70.080	Cyprinodon_variegatus
ENSSSCG00000022952	NMD3	100	75.644	ENSDARG00000015676	nmd3	99	75.752	Danio_rerio
ENSSSCG00000022952	NMD3	100	92.644	ENSDNOG00000045222	NMD3	100	92.644	Dasypus_novemcinctus
ENSSSCG00000022952	NMD3	97	84.016	ENSDORG00000005716	Nmd3	99	96.667	Dipodomys_ordii
ENSSSCG00000022952	NMD3	96	53.768	FBgn0023542	Nmd3	94	53.768	Drosophila_melanogaster
ENSSSCG00000022952	NMD3	100	80.716	ENSETEG00000003168	NMD3	99	80.885	Echinops_telfairi
ENSSSCG00000022952	NMD3	87	59.681	ENSEBUG00000014316	nmd3	96	59.681	Eptatretus_burgeri
ENSSSCG00000022952	NMD3	100	94.433	ENSEASG00005018672	NMD3	100	94.433	Equus_asinus_asinus
ENSSSCG00000022952	NMD3	99	94.970	ENSECAG00000000188	NMD3	97	94.970	Equus_caballus
ENSSSCG00000022952	NMD3	94	68.790	ENSEEUG00000010642	-	100	68.790	Erinaceus_europaeus
ENSSSCG00000022952	NMD3	100	74.603	ENSELUG00000024123	nmd3	99	74.699	Esox_lucius
ENSSSCG00000022952	NMD3	100	95.427	ENSFCAG00000022867	NMD3	99	95.573	Felis_catus
ENSSSCG00000022952	NMD3	94	82.030	ENSFALG00000008711	NMD3	99	82.441	Ficedula_albicollis
ENSSSCG00000022952	NMD3	99	93.426	ENSFDAG00000013724	-	99	93.964	Fukomys_damarensis
ENSSSCG00000022952	NMD3	100	75.992	ENSFDAG00000012197	-	100	76.389	Fukomys_damarensis
ENSSSCG00000022952	NMD3	100	75.397	ENSFHEG00000000415	nmd3	99	75.502	Fundulus_heteroclitus
ENSSSCG00000022952	NMD3	97	74.642	ENSGMOG00000009675	nmd3	99	74.741	Gadus_morhua
ENSSSCG00000022952	NMD3	100	80.915	ENSGALG00000009533	NMD3	99	81.087	Gallus_gallus
ENSSSCG00000022952	NMD3	99	75.649	ENSGAFG00000012798	nmd3	96	74.704	Gambusia_affinis
ENSSSCG00000022952	NMD3	100	75.595	ENSGACG00000010028	nmd3	99	75.904	Gasterosteus_aculeatus
ENSSSCG00000022952	NMD3	100	83.101	ENSGAGG00000006556	NMD3	99	83.300	Gopherus_agassizii
ENSSSCG00000022952	NMD3	100	95.427	ENSGGOG00000007157	NMD3	100	95.427	Gorilla_gorilla
ENSSSCG00000022952	NMD3	99	76.400	ENSGGOG00000028590	-	99	76.660	Gorilla_gorilla
ENSSSCG00000022952	NMD3	100	77.579	ENSHBUG00000001781	nmd3	99	77.711	Haplochromis_burtoni
ENSSSCG00000022952	NMD3	100	94.036	ENSHGLG00000014451	-	100	94.036	Heterocephalus_glaber_female
ENSSSCG00000022952	NMD3	100	73.956	ENSHGLG00000010477	-	100	73.956	Heterocephalus_glaber_female
ENSSSCG00000022952	NMD3	100	94.036	ENSHGLG00100006613	-	100	94.036	Heterocephalus_glaber_male
ENSSSCG00000022952	NMD3	100	74.553	ENSHGLG00100001042	-	100	74.553	Heterocephalus_glaber_male
ENSSSCG00000022952	NMD3	99	75.944	ENSHCOG00000004292	nmd3	92	75.944	Hippocampus_comes
ENSSSCG00000022952	NMD3	100	77.976	ENSIPUG00000005073	nmd3	99	78.112	Ictalurus_punctatus
ENSSSCG00000022952	NMD3	100	95.626	ENSSTOG00000001899	NMD3	100	95.626	Ictidomys_tridecemlineatus
ENSSSCG00000022952	NMD3	97	93.648	ENSJJAG00000019759	Nmd3	99	93.983	Jaculus_jaculus
ENSSSCG00000022952	NMD3	100	77.381	ENSKMAG00000020427	nmd3	99	77.510	Kryptolebias_marmoratus
ENSSSCG00000022952	NMD3	100	75.494	ENSLBEG00000022216	nmd3	99	75.600	Labrus_bergylta
ENSSSCG00000022952	NMD3	99	74.297	ENSLACG00000005731	NMD3	99	77.117	Latimeria_chalumnae
ENSSSCG00000022952	NMD3	100	78.770	ENSLOCG00000003561	nmd3	99	78.916	Lepisosteus_oculatus
ENSSSCG00000022952	NMD3	100	92.262	ENSLAFG00000007231	NMD3	100	92.262	Loxodonta_africana
ENSSSCG00000022952	NMD3	100	95.030	ENSMFAG00000040934	NMD3	100	95.030	Macaca_fascicularis
ENSSSCG00000022952	NMD3	99	94.990	ENSMMUG00000009564	NMD3	99	94.534	Macaca_mulatta
ENSSSCG00000022952	NMD3	100	95.030	ENSMNEG00000034626	NMD3	100	95.030	Macaca_nemestrina
ENSSSCG00000022952	NMD3	88	94.131	ENSMLEG00000002741	NMD3	100	94.131	Mandrillus_leucophaeus
ENSSSCG00000022952	NMD3	100	76.786	ENSMAMG00000012427	nmd3	99	76.908	Mastacembelus_armatus
ENSSSCG00000022952	NMD3	100	77.579	ENSMZEG00005016888	nmd3	99	77.711	Maylandia_zebra
ENSSSCG00000022952	NMD3	100	79.920	ENSMGAG00000010498	NMD3	99	80.080	Meleagris_gallopavo
ENSSSCG00000022952	NMD3	100	94.036	ENSMAUG00000000633	Nmd3	100	94.036	Mesocricetus_auratus
ENSSSCG00000022952	NMD3	100	94.831	ENSMICG00000049196	NMD3	100	94.831	Microcebus_murinus
ENSSSCG00000022952	NMD3	99	93.227	ENSMOCG00000005180	Nmd3	100	93.227	Microtus_ochrogaster
ENSSSCG00000022952	NMD3	100	76.832	ENSMMOG00000012765	nmd3	99	76.954	Mola_mola
ENSSSCG00000022952	NMD3	100	64.479	ENSMODG00000016296	NMD3	100	65.318	Monodelphis_domestica
ENSSSCG00000022952	NMD3	100	76.984	ENSMALG00000009256	nmd3	99	77.108	Monopterus_albus
ENSSSCG00000022952	NMD3	100	93.439	MGP_CAROLIEiJ_G0025069	Nmd3	100	93.439	Mus_caroli
ENSSSCG00000022952	NMD3	100	93.439	ENSMUSG00000027787	Nmd3	100	93.439	Mus_musculus
ENSSSCG00000022952	NMD3	100	93.837	MGP_PahariEiJ_G0026512	Nmd3	100	93.837	Mus_pahari
ENSSSCG00000022952	NMD3	100	93.638	MGP_SPRETEiJ_G0026011	Nmd3	100	93.638	Mus_spretus
ENSSSCG00000022952	NMD3	100	96.223	ENSMPUG00000002955	NMD3	99	96.378	Mustela_putorius_furo
ENSSSCG00000022952	NMD3	97	89.613	ENSMLUG00000000701	NMD3	97	89.613	Myotis_lucifugus
ENSSSCG00000022952	NMD3	99	94.821	ENSNGAG00000012307	Nmd3	99	95.171	Nannospalax_galili
ENSSSCG00000022952	NMD3	100	76.984	ENSNBRG00000003324	nmd3	99	77.108	Neolamprologus_brichardi
ENSSSCG00000022952	NMD3	100	95.427	ENSNLEG00000004655	NMD3	100	95.427	Nomascus_leucogenys
ENSSSCG00000022952	NMD3	85	65.079	ENSOPRG00000007690	-	85	65.079	Ochotona_princeps
ENSSSCG00000022952	NMD3	100	94.235	ENSODEG00000006270	NMD3	100	94.235	Octodon_degus
ENSSSCG00000022952	NMD3	100	77.976	ENSONIG00000003643	nmd3	99	78.112	Oreochromis_niloticus
ENSSSCG00000022952	NMD3	99	96.378	ENSOCUG00000017454	NMD3	99	96.378	Oryctolagus_cuniculus
ENSSSCG00000022952	NMD3	100	76.587	ENSORLG00000006279	nmd3	99	76.707	Oryzias_latipes
ENSSSCG00000022952	NMD3	100	76.587	ENSORLG00020003843	nmd3	99	76.707	Oryzias_latipes_hni
ENSSSCG00000022952	NMD3	100	76.143	ENSORLG00015006379	nmd3	99	76.258	Oryzias_latipes_hsok
ENSSSCG00000022952	NMD3	100	77.183	ENSOMEG00000012144	nmd3	99	77.309	Oryzias_melastigma
ENSSSCG00000022952	NMD3	100	94.036	ENSOGAG00000014910	NMD3	100	94.036	Otolemur_garnettii
ENSSSCG00000022952	NMD3	99	95.591	ENSOARG00000001883	NMD3	97	95.591	Ovis_aries
ENSSSCG00000022952	NMD3	100	95.030	ENSPPAG00000043829	NMD3	100	95.030	Pan_paniscus
ENSSSCG00000022952	NMD3	100	94.872	ENSPPRG00000000724	NMD3	99	94.872	Panthera_pardus
ENSSSCG00000022952	NMD3	100	95.229	ENSPTIG00000016761	NMD3	99	95.372	Panthera_tigris_altaica
ENSSSCG00000022952	NMD3	100	95.030	ENSPTRG00000015586	NMD3	100	95.030	Pan_troglodytes
ENSSSCG00000022952	NMD3	99	95.190	ENSPANG00000006665	NMD3	95	95.050	Papio_anubis
ENSSSCG00000022952	NMD3	100	76.389	ENSPKIG00000009928	nmd3	99	76.506	Paramormyrops_kingsleyae
ENSSSCG00000022952	NMD3	100	82.704	ENSPSIG00000007591	NMD3	99	82.897	Pelodiscus_sinensis
ENSSSCG00000022952	NMD3	100	73.214	ENSPMGG00000014015	nmd3	99	73.293	Periophthalmus_magnuspinnatus
ENSSSCG00000022952	NMD3	100	94.036	ENSPEMG00000021880	Nmd3	100	94.036	Peromyscus_maniculatus_bairdii
ENSSSCG00000022952	NMD3	100	83.300	ENSPCIG00000020869	NMD3	100	83.300	Phascolarctos_cinereus
ENSSSCG00000022952	NMD3	100	76.389	ENSPFOG00000012103	nmd3	99	76.506	Poecilia_formosa
ENSSSCG00000022952	NMD3	100	76.587	ENSPLAG00000008087	nmd3	99	76.707	Poecilia_latipinna
ENSSSCG00000022952	NMD3	100	76.389	ENSPMEG00000008506	nmd3	99	76.506	Poecilia_mexicana
ENSSSCG00000022952	NMD3	100	76.587	ENSPREG00000001848	nmd3	99	76.707	Poecilia_reticulata
ENSSSCG00000022952	NMD3	100	95.427	ENSPPYG00000014263	NMD3	100	95.427	Pongo_abelii
ENSSSCG00000022952	NMD3	91	75.652	ENSPCAG00000009851	NMD3	100	75.652	Procavia_capensis
ENSSSCG00000022952	NMD3	85	95.798	ENSPVAG00000003301	NMD3	85	95.798	Pteropus_vampyrus
ENSSSCG00000022952	NMD3	100	77.381	ENSPNYG00000006778	nmd3	99	77.510	Pundamilia_nyererei
ENSSSCG00000022952	NMD3	100	77.381	ENSPNAG00000009442	nmd3	99	77.510	Pygocentrus_nattereri
ENSSSCG00000022952	NMD3	100	93.241	ENSRNOG00000009310	Nmd3	100	93.241	Rattus_norvegicus
ENSSSCG00000022952	NMD3	100	90.855	ENSRBIG00000040379	NMD3	100	90.855	Rhinopithecus_bieti
ENSSSCG00000022952	NMD3	100	95.427	ENSRROG00000036181	NMD3	100	95.427	Rhinopithecus_roxellana
ENSSSCG00000022952	NMD3	96	43.281	YHR170W	NMD3	95	43.676	Saccharomyces_cerevisiae
ENSSSCG00000022952	NMD3	99	93.976	ENSSBOG00000024021	NMD3	99	93.788	Saimiri_boliviensis_boliviensis
ENSSSCG00000022952	NMD3	100	78.698	ENSSHAG00000016044	NMD3	100	78.698	Sarcophilus_harrisii
ENSSSCG00000022952	NMD3	100	76.389	ENSSFOG00015003609	nmd3	99	76.506	Scleropages_formosus
ENSSSCG00000022952	NMD3	100	75.198	ENSSMAG00000012887	nmd3	99	75.301	Scophthalmus_maximus
ENSSSCG00000022952	NMD3	100	76.984	ENSSDUG00000023721	nmd3	99	77.108	Seriola_dumerili
ENSSSCG00000022952	NMD3	100	76.984	ENSSLDG00000006565	nmd3	99	77.108	Seriola_lalandi_dorsalis
ENSSSCG00000022952	NMD3	97	93.443	ENSSARG00000010402	NMD3	99	93.776	Sorex_araneus
ENSSSCG00000022952	NMD3	99	82.129	ENSSPUG00000018791	NMD3	99	82.424	Sphenodon_punctatus
ENSSSCG00000022952	NMD3	100	76.786	ENSSPAG00000014328	nmd3	99	76.908	Stegastes_partitus
ENSSSCG00000022952	NMD3	91	80.911	ENSTGUG00000015141	-	100	80.911	Taeniopygia_guttata
ENSSSCG00000022952	NMD3	100	81.312	ENSTGUG00000011140	-	100	81.312	Taeniopygia_guttata
ENSSSCG00000022952	NMD3	100	75.992	ENSTRUG00000005958	nmd3	99	76.104	Takifugu_rubripes
ENSSSCG00000022952	NMD3	100	67.396	ENSTBEG00000011783	-	100	67.396	Tupaia_belangeri
ENSSSCG00000022952	NMD3	100	90.656	ENSTTRG00000012938	NMD3	100	90.656	Tursiops_truncatus
ENSSSCG00000022952	NMD3	84	91.962	ENSUAMG00000009305	-	99	95.522	Ursus_americanus
ENSSSCG00000022952	NMD3	99	95.582	ENSUMAG00000011070	NMD3	99	95.573	Ursus_maritimus
ENSSSCG00000022952	NMD3	100	97.217	ENSVPAG00000008779	NMD3	100	97.217	Vicugna_pacos
ENSSSCG00000022952	NMD3	100	95.229	ENSVVUG00000023055	NMD3	100	95.000	Vulpes_vulpes
ENSSSCG00000022952	NMD3	100	82.107	ENSXETG00000027727	nmd3	99	82.495	Xenopus_tropicalis
ENSSSCG00000022952	NMD3	68	71.154	ENSXCOG00000012490	nmd3	80	76.923	Xiphophorus_couchianus
ENSSSCG00000022952	NMD3	100	76.389	ENSXMAG00000018406	nmd3	99	76.506	Xiphophorus_maculatus