EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000023041 (Gene tree)
Gene ID: 100624867
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 198549 bases
Position: chr13:208060917-208259465
Accession: 100624867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000026692	KH_1	PF00013.29	2.1e-55	1	3
ENSSSCP00000026692	KH_1	PF00013.29	2.1e-55	2	3
ENSSSCP00000026692	KH_1	PF00013.29	2.1e-55	3	3
ENSSSCP00000053741	KH_1	PF00013.29	2.1e-55	1	3
ENSSSCP00000053741	KH_1	PF00013.29	2.1e-55	2	3
ENSSSCP00000053741	KH_1	PF00013.29	2.1e-55	3	3
ENSSSCP00000032949	KH_1	PF00013.29	2.1e-55	1	3
ENSSSCP00000032949	KH_1	PF00013.29	2.1e-55	2	3
ENSSSCP00000032949	KH_1	PF00013.29	2.1e-55	3	3
ENSSSCP00000026692	KH_2	PF07650.17	4.3e-15	1	1
ENSSSCP00000053741	KH_2	PF07650.17	4.3e-15	1	1
ENSSSCP00000032949	KH_2	PF07650.17	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000030310	PCBP3-202	1922	XM_021071085	ENSSSCP00000026692	351 (aa)	XP_020926744	I3LRF8
ENSSSCT00000053396	PCBP3-201	1998	XM_021071087	ENSSSCP00000032949	351 (aa)	XP_020926746	A0A286ZMU5
ENSSSCT00000065713	PCBP3-203	1939	-	ENSSSCP00000053741	351 (aa)	-	I3LRF8

Gene Model

Click here to download ENSSSCG00000023041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000023041	PCBP3	83	75.000	ENSSSCG00000033742	-	96	75.000
ENSSSCG00000023041	PCBP3	91	72.881	ENSSSCG00000000274	PCBP2	99	75.168
ENSSSCG00000023041	PCBP3	85	42.254	ENSSSCG00000024396	NOVA1	58	42.254
ENSSSCG00000023041	PCBP3	71	35.938	ENSSSCG00000013538	KHSRP	63	35.938
ENSSSCG00000023041	PCBP3	71	52.857	ENSSSCG00000022760	HNRNPK	55	52.857
ENSSSCG00000023041	PCBP3	85	64.120	ENSSSCG00000028446	PCBP4	73	64.120
ENSSSCG00000023041	PCBP3	61	41.270	ENSSSCG00000005702	FUBP3	55	41.270
ENSSSCG00000023041	PCBP3	86	33.582	ENSSSCG00000023128	-	60	33.582
ENSSSCG00000023041	PCBP3	89	36.567	ENSSSCG00000011795	IGF2BP2	70	36.567
ENSSSCG00000023041	PCBP3	85	36.111	ENSSSCG00000036695	IGF2BP3	67	33.577
ENSSSCG00000023041	PCBP3	91	66.201	ENSSSCG00000027224	PCBP1	99	66.387
ENSSSCG00000023041	PCBP3	59	40.625	ENSSSCG00000003771	-	60	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023041	PCBP3	100	97.151	ENSG00000183570	PCBP3	100	97.151	Homo_sapiens
ENSSSCG00000023041	PCBP3	91	75.851	ENSAPOG00000023735	zgc:110045	99	75.851	Acanthochromis_polyacanthus
ENSSSCG00000023041	PCBP3	91	67.449	ENSACIG00000002577	zgc:110045	96	73.934	Amphilophus_citrinellus
ENSSSCG00000023041	PCBP3	76	71.845	ENSAOCG00000005266	zgc:110045	97	71.845	Amphiprion_ocellaris
ENSSSCG00000023041	PCBP3	88	76.358	ENSAPEG00000000729	zgc:110045	72	76.358	Amphiprion_percula
ENSSSCG00000023041	PCBP3	85	72.444	ENSATEG00000011191	zgc:110045	65	72.444	Anabas_testudineus
ENSSSCG00000023041	PCBP3	88	76.997	ENSACLG00000019285	zgc:110045	72	76.997	Astatotilapia_calliptera
ENSSSCG00000023041	PCBP3	100	98.291	ENSBTAG00000030775	PCBP3	100	98.291	Bos_taurus
ENSSSCG00000023041	PCBP3	100	92.722	ENSCAFG00000011907	PCBP3	100	92.722	Canis_familiaris
ENSSSCG00000023041	PCBP3	99	91.008	ENSCHIG00000015841	PCBP3	98	91.008	Capra_hircus
ENSSSCG00000023041	PCBP3	78	84.519	ENSTSYG00000005254	PCBP3	94	84.519	Carlito_syrichta
ENSSSCG00000023041	PCBP3	99	73.699	ENSCAPG00000006767	PCBP3	91	73.699	Cavia_aperea
ENSSSCG00000023041	PCBP3	100	91.914	ENSCPOG00000003648	PCBP3	100	91.914	Cavia_porcellus
ENSSSCG00000023041	PCBP3	100	97.721	ENSCCAG00000024561	PCBP3	100	97.721	Cebus_capucinus
ENSSSCG00000023041	PCBP3	100	96.866	ENSCATG00000038419	PCBP3	100	96.866	Cercocebus_atys
ENSSSCG00000023041	PCBP3	100	92.722	ENSCLAG00000006667	PCBP3	100	92.722	Chinchilla_lanigera
ENSSSCG00000023041	PCBP3	100	96.581	ENSCANG00000026757	PCBP3	100	96.581	Colobus_angolensis_palliatus
ENSSSCG00000023041	PCBP3	100	92.453	ENSCGRG00001006836	Pcbp3	100	92.453	Cricetulus_griseus_chok1gshd
ENSSSCG00000023041	PCBP3	100	92.453	ENSCGRG00000001837	Pcbp3	100	92.453	Cricetulus_griseus_crigri
ENSSSCG00000023041	PCBP3	91	75.232	ENSCSEG00000010020	zgc:110045	99	75.232	Cynoglossus_semilaevis
ENSSSCG00000023041	PCBP3	74	74.112	ENSCVAG00000004726	zgc:110045	89	74.112	Cyprinodon_variegatus
ENSSSCG00000023041	PCBP3	77	77.778	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSSSCG00000023041	PCBP3	99	89.918	ENSDNOG00000049518	PCBP3	100	89.918	Dasypus_novemcinctus
ENSSSCG00000023041	PCBP3	81	82.927	ENSDORG00000003640	Pcbp3	99	82.927	Dipodomys_ordii
ENSSSCG00000023041	PCBP3	85	72.269	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSSSCG00000023041	PCBP3	100	98.006	ENSEASG00005007068	PCBP3	100	98.006	Equus_asinus_asinus
ENSSSCG00000023041	PCBP3	100	98.291	ENSECAG00000012413	PCBP3	100	98.291	Equus_caballus
ENSSSCG00000023041	PCBP3	88	75.238	ENSELUG00000019784	zgc:110045	72	75.238	Esox_lucius
ENSSSCG00000023041	PCBP3	100	98.291	ENSFCAG00000014812	PCBP3	100	98.291	Felis_catus
ENSSSCG00000023041	PCBP3	100	97.436	ENSFDAG00000009117	PCBP3	100	97.436	Fukomys_damarensis
ENSSSCG00000023041	PCBP3	87	66.071	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSSSCG00000023041	PCBP3	89	72.783	ENSGMOG00000005953	zgc:110045	98	72.783	Gadus_morhua
ENSSSCG00000023041	PCBP3	75	79.126	ENSGAFG00000017864	zgc:110045	91	79.126	Gambusia_affinis
ENSSSCG00000023041	PCBP3	91	75.926	ENSGACG00000003044	zgc:110045	99	75.926	Gasterosteus_aculeatus
ENSSSCG00000023041	PCBP3	100	96.866	ENSGGOG00000003683	PCBP3	100	96.866	Gorilla_gorilla
ENSSSCG00000023041	PCBP3	91	76.471	ENSHBUG00000012495	zgc:110045	99	76.471	Haplochromis_burtoni
ENSSSCG00000023041	PCBP3	99	92.120	ENSHGLG00000018620	PCBP3	99	92.120	Heterocephalus_glaber_female
ENSSSCG00000023041	PCBP3	99	92.120	ENSHGLG00100013590	PCBP3	99	92.120	Heterocephalus_glaber_male
ENSSSCG00000023041	PCBP3	89	66.667	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSSSCG00000023041	PCBP3	79	72.018	ENSIPUG00000003932	zgc:110045	81	72.018	Ictalurus_punctatus
ENSSSCG00000023041	PCBP3	100	92.183	ENSSTOG00000007178	PCBP3	100	92.183	Ictidomys_tridecemlineatus
ENSSSCG00000023041	PCBP3	100	92.453	ENSJJAG00000021192	Pcbp3	100	92.453	Jaculus_jaculus
ENSSSCG00000023041	PCBP3	72	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSSSCG00000023041	PCBP3	91	70.326	ENSLBEG00000023074	zgc:110045	99	70.326	Labrus_bergylta
ENSSSCG00000023041	PCBP3	87	98.745	ENSLAFG00000020835	PCBP3	100	98.745	Loxodonta_africana
ENSSSCG00000023041	PCBP3	100	96.866	ENSMFAG00000034574	PCBP3	100	96.866	Macaca_fascicularis
ENSSSCG00000023041	PCBP3	100	96.866	ENSMMUG00000003825	PCBP3	100	96.866	Macaca_mulatta
ENSSSCG00000023041	PCBP3	100	96.866	ENSMNEG00000035551	PCBP3	100	99.373	Macaca_nemestrina
ENSSSCG00000023041	PCBP3	100	96.866	ENSMLEG00000038785	PCBP3	100	96.866	Mandrillus_leucophaeus
ENSSSCG00000023041	PCBP3	87	76.603	ENSMAMG00000014389	zgc:110045	99	76.603	Mastacembelus_armatus
ENSSSCG00000023041	PCBP3	88	76.997	ENSMZEG00005011785	zgc:110045	72	76.997	Maylandia_zebra
ENSSSCG00000023041	PCBP3	100	92.453	ENSMAUG00000007036	Pcbp3	100	92.453	Mesocricetus_auratus
ENSSSCG00000023041	PCBP3	100	96.866	ENSMICG00000012679	PCBP3	100	96.866	Microcebus_murinus
ENSSSCG00000023041	PCBP3	100	92.183	ENSMOCG00000016127	Pcbp3	100	92.183	Microtus_ochrogaster
ENSSSCG00000023041	PCBP3	69	80.556	ENSMMOG00000008399	zgc:110045	85	80.556	Mola_mola
ENSSSCG00000023041	PCBP3	72	76.440	ENSMALG00000008763	zgc:110045	92	76.440	Monopterus_albus
ENSSSCG00000023041	PCBP3	100	92.183	MGP_CAROLIEiJ_G0015475	Pcbp3	100	98.758	Mus_caroli
ENSSSCG00000023041	PCBP3	100	91.914	ENSMUSG00000001120	Pcbp3	99	98.758	Mus_musculus
ENSSSCG00000023041	PCBP3	100	92.183	MGP_PahariEiJ_G0030889	Pcbp3	100	98.758	Mus_pahari
ENSSSCG00000023041	PCBP3	100	92.183	MGP_SPRETEiJ_G0016288	Pcbp3	100	98.758	Mus_spretus
ENSSSCG00000023041	PCBP3	100	91.914	ENSMLUG00000003074	PCBP3	100	91.914	Myotis_lucifugus
ENSSSCG00000023041	PCBP3	100	92.183	ENSNGAG00000005416	Pcbp3	100	92.183	Nannospalax_galili
ENSSSCG00000023041	PCBP3	88	76.997	ENSNBRG00000017646	zgc:110045	72	76.997	Neolamprologus_brichardi
ENSSSCG00000023041	PCBP3	100	97.436	ENSNLEG00000002639	PCBP3	100	97.436	Nomascus_leucogenys
ENSSSCG00000023041	PCBP3	91	83.196	ENSMEUG00000012960	PCBP3	100	83.196	Notamacropus_eugenii
ENSSSCG00000023041	PCBP3	99	90.515	ENSODEG00000012873	PCBP3	100	90.515	Octodon_degus
ENSSSCG00000023041	PCBP3	88	76.997	ENSONIG00000010370	zgc:110045	76	76.997	Oreochromis_niloticus
ENSSSCG00000023041	PCBP3	84	89.883	ENSOANG00000006265	PCBP3	90	89.883	Ornithorhynchus_anatinus
ENSSSCG00000023041	PCBP3	88	76.677	ENSORLG00000014385	-	72	76.677	Oryzias_latipes
ENSSSCG00000023041	PCBP3	88	76.358	ENSORLG00020003139	zgc:110045	86	73.460	Oryzias_latipes_hni
ENSSSCG00000023041	PCBP3	88	76.358	ENSOMEG00000015459	-	72	76.358	Oryzias_melastigma
ENSSSCG00000023041	PCBP3	100	91.328	ENSOARG00000012704	PCBP3	100	91.328	Ovis_aries
ENSSSCG00000023041	PCBP3	100	96.866	ENSPPAG00000021940	PCBP3	100	96.866	Pan_paniscus
ENSSSCG00000023041	PCBP3	100	98.291	ENSPPRG00000003933	PCBP3	100	98.291	Panthera_pardus
ENSSSCG00000023041	PCBP3	100	82.768	ENSPTIG00000012038	PCBP3	100	83.761	Panthera_tigris_altaica
ENSSSCG00000023041	PCBP3	99	73.352	ENSPTRG00000014010	PCBP3	99	73.352	Pan_troglodytes
ENSSSCG00000023041	PCBP3	100	96.866	ENSPANG00000023631	PCBP3	100	96.866	Papio_anubis
ENSSSCG00000023041	PCBP3	73	74.627	ENSPMGG00000022531	-	92	74.627	Periophthalmus_magnuspinnatus
ENSSSCG00000023041	PCBP3	88	64.907	ENSPMGG00000021588	-	72	64.907	Periophthalmus_magnuspinnatus
ENSSSCG00000023041	PCBP3	100	92.453	ENSPEMG00000000587	Pcbp3	100	92.453	Peromyscus_maniculatus_bairdii
ENSSSCG00000023041	PCBP3	89	75.786	ENSPFOG00000002348	zgc:110045	98	75.786	Poecilia_formosa
ENSSSCG00000023041	PCBP3	77	73.934	ENSPLAG00000017488	zgc:110045	93	73.934	Poecilia_latipinna
ENSSSCG00000023041	PCBP3	87	75.244	ENSPMEG00000012762	zgc:110045	91	79.126	Poecilia_mexicana
ENSSSCG00000023041	PCBP3	88	76.358	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSSSCG00000023041	PCBP3	81	89.453	ENSPPYG00000011525	-	94	89.453	Pongo_abelii
ENSSSCG00000023041	PCBP3	87	71.225	ENSPCAG00000001454	PCBP3	100	71.225	Procavia_capensis
ENSSSCG00000023041	PCBP3	100	96.866	ENSPCOG00000013797	PCBP3	100	96.866	Propithecus_coquereli
ENSSSCG00000023041	PCBP3	83	89.565	ENSPVAG00000000832	PCBP3	83	89.565	Pteropus_vampyrus
ENSSSCG00000023041	PCBP3	77	74.408	ENSPNYG00000004637	zgc:110045	96	74.408	Pundamilia_nyererei
ENSSSCG00000023041	PCBP3	79	78.673	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSSSCG00000023041	PCBP3	100	96.866	ENSRROG00000034567	PCBP3	100	96.866	Rhinopithecus_roxellana
ENSSSCG00000023041	PCBP3	100	96.866	ENSSBOG00000005789	PCBP3	100	96.866	Saimiri_boliviensis_boliviensis
ENSSSCG00000023041	PCBP3	88	76.358	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSSSCG00000023041	PCBP3	80	75.000	ENSSDUG00000019371	zgc:110045	66	75.000	Seriola_dumerili
ENSSSCG00000023041	PCBP3	88	76.677	ENSSLDG00000021064	zgc:110045	72	76.677	Seriola_lalandi_dorsalis
ENSSSCG00000023041	PCBP3	75	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSSSCG00000023041	PCBP3	91	76.161	ENSSPAG00000000563	zgc:110045	99	76.161	Stegastes_partitus
ENSSSCG00000023041	PCBP3	71	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSSSCG00000023041	PCBP3	66	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSSSCG00000023041	PCBP3	66	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSSSCG00000023041	PCBP3	100	90.027	ENSUAMG00000006491	PCBP3	100	99.644	Ursus_americanus
ENSSSCG00000023041	PCBP3	100	80.800	ENSUMAG00000025403	PCBP3	100	80.800	Ursus_maritimus
ENSSSCG00000023041	PCBP3	100	87.637	ENSVVUG00000023862	PCBP3	96	87.637	Vulpes_vulpes
ENSSSCG00000023041	PCBP3	64	80.247	ENSXCOG00000005968	zgc:110045	82	80.247	Xiphophorus_couchianus
ENSSSCG00000023041	PCBP3	88	76.358	ENSXMAG00000008030	zgc:110045	72	76.358	Xiphophorus_maculatus