EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000023097 (Gene tree)
Gene ID: 100515769
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 7896 bases
Position: chr2:15826654-15834549
Accession: 100515769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	1	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	2	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	3	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	4	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	5	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	6	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	7	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	8	9
ENSSSCP00000023673	zf-C2H2	PF00096.26	3.7e-40	9	9
ENSSSCP00000023673	zf-met	PF12874.7	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000023067	ZNF408-201	5372	XM_003122824	ENSSSCP00000023673	747 (aa)	XP_003122872	I3LHX4

Gene Model

Click here to download ENSSSCG00000023097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023097	ZNF408	96	79.330	ENSG00000175213	ZNF408	100	79.339	Homo_sapiens
ENSSSCG00000023097	ZNF408	97	81.103	ENSAMEG00000006904	ZNF408	100	81.103	Ailuropoda_melanoleuca
ENSSSCG00000023097	ZNF408	95	74.477	ENSANAG00000036294	ZNF408	93	81.361	Aotus_nancymaae
ENSSSCG00000023097	ZNF408	87	39.891	ENSAMXG00000032642	znf408	91	40.639	Astyanax_mexicanus
ENSSSCG00000023097	ZNF408	96	79.749	ENSCJAG00000019859	ZNF408	100	79.752	Callithrix_jacchus
ENSSSCG00000023097	ZNF408	100	82.447	ENSCAFG00000009143	ZNF408	100	82.713	Canis_familiaris
ENSSSCG00000023097	ZNF408	100	82.314	ENSCAFG00020019155	ZNF408	100	82.580	Canis_lupus_dingo
ENSSSCG00000023097	ZNF408	80	80.000	ENSCHIG00000025346	ZNF408	97	80.872	Capra_hircus
ENSSSCG00000023097	ZNF408	97	77.793	ENSTSYG00000025443	ZNF408	100	77.793	Carlito_syrichta
ENSSSCG00000023097	ZNF408	96	78.212	ENSCCAG00000029472	ZNF408	100	78.099	Cebus_capucinus
ENSSSCG00000023097	ZNF408	53	96.194	ENSCHOG00000009909	ZNF408	74	96.194	Choloepus_hoffmanni
ENSSSCG00000023097	ZNF408	97	67.950	ENSCGRG00001023588	Zfp408	100	67.675	Cricetulus_griseus_chok1gshd
ENSSSCG00000023097	ZNF408	97	67.950	ENSCGRG00000017618	Zfp408	100	67.675	Cricetulus_griseus_crigri
ENSSSCG00000023097	ZNF408	97	75.691	ENSDNOG00000047669	ZNF408	99	75.691	Dasypus_novemcinctus
ENSSSCG00000023097	ZNF408	96	68.050	ENSDORG00000000387	Zfp408	99	68.524	Dipodomys_ordii
ENSSSCG00000023097	ZNF408	86	64.248	ENSETEG00000017621	-	100	65.371	Echinops_telfairi
ENSSSCG00000023097	ZNF408	97	82.069	ENSEASG00005015461	ZNF408	100	82.069	Equus_asinus_asinus
ENSSSCG00000023097	ZNF408	97	82.069	ENSECAG00000010878	ZNF408	100	82.069	Equus_caballus
ENSSSCG00000023097	ZNF408	97	67.125	ENSEEUG00000010466	ZNF408	94	70.073	Erinaceus_europaeus
ENSSSCG00000023097	ZNF408	97	81.931	ENSFCAG00000029105	ZNF408	100	81.931	Felis_catus
ENSSSCG00000023097	ZNF408	79	39.152	ENSFHEG00000016754	-	76	38.574	Fundulus_heteroclitus
ENSSSCG00000023097	ZNF408	91	35.453	ENSGAFG00000018557	-	58	46.585	Gambusia_affinis
ENSSSCG00000023097	ZNF408	96	79.190	ENSGGOG00000010152	ZNF408	100	79.201	Gorilla_gorilla
ENSSSCG00000023097	ZNF408	83	79.775	ENSLAFG00000027848	ZNF408	100	79.775	Loxodonta_africana
ENSSSCG00000023097	ZNF408	95	81.601	ENSMICG00000045320	ZNF408	100	81.241	Microcebus_murinus
ENSSSCG00000023097	ZNF408	70	53.964	ENSMODG00000019895	-	83	54.315	Monodelphis_domestica
ENSSSCG00000023097	ZNF408	95	82.609	ENSMPUG00000005490	ZNF408	100	82.345	Mustela_putorius_furo
ENSSSCG00000023097	ZNF408	97	70.069	ENSNGAG00000000309	Zfp408	100	70.345	Nannospalax_galili
ENSSSCG00000023097	ZNF408	97	79.477	ENSNLEG00000014132	ZNF408	100	79.477	Nomascus_leucogenys
ENSSSCG00000023097	ZNF408	96	61.304	ENSOPRG00000009225	ZNF408	99	61.165	Ochotona_princeps
ENSSSCG00000023097	ZNF408	97	74.171	ENSOCUG00000010953	ZNF408	100	74.171	Oryctolagus_cuniculus
ENSSSCG00000023097	ZNF408	83	80.645	ENSOGAG00000034080	ZNF408	99	80.645	Otolemur_garnettii
ENSSSCG00000023097	ZNF408	96	79.190	ENSPPAG00000034993	ZNF408	100	79.201	Pan_paniscus
ENSSSCG00000023097	ZNF408	97	81.793	ENSPPRG00000016866	ZNF408	100	81.793	Panthera_pardus
ENSSSCG00000023097	ZNF408	97	82.483	ENSPTIG00000015467	ZNF408	100	82.483	Panthera_tigris_altaica
ENSSSCG00000023097	ZNF408	96	79.190	ENSPTRG00000003551	ZNF408	100	79.201	Pan_troglodytes
ENSSSCG00000023097	ZNF408	74	70.736	ENSPEMG00000016757	Zfp408	99	70.557	Peromyscus_maniculatus_bairdii
ENSSSCG00000023097	ZNF408	91	36.212	ENSPFOG00000001760	-	92	47.769	Poecilia_formosa
ENSSSCG00000023097	ZNF408	50	48.806	ENSPMEG00000021147	-	72	48.806	Poecilia_mexicana
ENSSSCG00000023097	ZNF408	91	35.121	ENSPREG00000017068	-	99	35.121	Poecilia_reticulata
ENSSSCG00000023097	ZNF408	96	77.654	ENSPPYG00000003318	ZNF408	100	78.913	Pongo_abelii
ENSSSCG00000023097	ZNF408	97	75.448	ENSPCAG00000014001	ZNF408	100	75.586	Procavia_capensis
ENSSSCG00000023097	ZNF408	95	82.468	ENSPCOG00000028698	ZNF408	100	82.094	Propithecus_coquereli
ENSSSCG00000023097	ZNF408	97	83.448	ENSPVAG00000015791	ZNF408	100	82.759	Pteropus_vampyrus
ENSSSCG00000023097	ZNF408	96	78.073	ENSSBOG00000033023	ZNF408	100	78.237	Saimiri_boliviensis_boliviensis
ENSSSCG00000023097	ZNF408	73	88.031	ENSTBEG00000004260	ZNF408	83	88.031	Tupaia_belangeri
ENSSSCG00000023097	ZNF408	97	81.379	ENSUAMG00000026154	ZNF408	100	81.379	Ursus_americanus
ENSSSCG00000023097	ZNF408	97	81.241	ENSUMAG00000014405	ZNF408	100	81.241	Ursus_maritimus
ENSSSCG00000023097	ZNF408	100	82.314	ENSVVUG00000026805	ZNF408	100	82.314	Vulpes_vulpes
ENSSSCG00000023097	ZNF408	50	54.450	ENSXETG00000001980	znf408	100	53.927	Xenopus_tropicalis
ENSSSCG00000023097	ZNF408	50	46.667	ENSXCOG00000002869	-	75	47.436	Xiphophorus_couchianus