EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000023128 (Gene tree)
Gene ID: 100620940
Gene Symbol: -
Alias: -
Full Name: insulin like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 45662 bases
Position: chr12:25197257-25242918
Accession: 100620940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000020836	KH_1	PF00013.29	1.3e-55	1	4
ENSSSCP00000020836	KH_1	PF00013.29	1.3e-55	2	4
ENSSSCP00000020836	KH_1	PF00013.29	1.3e-55	3	4
ENSSSCP00000020836	KH_1	PF00013.29	1.3e-55	4	4
ENSSSCP00000043827	KH_1	PF00013.29	1.3e-55	1	4
ENSSSCP00000043827	KH_1	PF00013.29	1.3e-55	2	4
ENSSSCP00000043827	KH_1	PF00013.29	1.3e-55	3	4
ENSSSCP00000043827	KH_1	PF00013.29	1.3e-55	4	4
ENSSSCP00000020836	RRM_1	PF00076.22	1.8e-16	1	2
ENSSSCP00000020836	RRM_1	PF00076.22	1.8e-16	2	2
ENSSSCP00000043827	RRM_1	PF00076.22	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000063269	-	1716	-	ENSSSCP00000043827	571 (aa)	-	A0A287AIK1
ENSSSCT00000022825	-	1734	XM_003358080	ENSSSCP00000020836	577 (aa)	XP_003358128	I3L9X2

Gene Model

Click here to download ENSSSCG00000023128's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05206	MicroRNAs in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000023128	-	100	74.792	ENSSSCG00000036695	IGF2BP3	100	74.095
ENSSSCG00000023128	-	100	68.166	ENSSSCG00000001827	-	100	68.166
ENSSSCG00000023128	-	96	67.384	ENSSSCG00000011795	IGF2BP2	99	66.476
ENSSSCG00000023128	-	60	30.597	ENSSSCG00000028446	PCBP4	73	32.800
ENSSSCG00000023128	-	60	33.582	ENSSSCG00000023041	PCBP3	86	33.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023128	-	100	99.653	ENSG00000159217	IGF2BP1	100	100.000	Homo_sapiens
ENSSSCG00000023128	-	100	99.307	ENSAMEG00000005087	IGF2BP1	97	99.307	Ailuropoda_melanoleuca
ENSSSCG00000023128	-	90	94.242	ENSAPLG00000012620	IGF2BP1	100	94.242	Anas_platyrhynchos
ENSSSCG00000023128	-	100	93.934	ENSACAG00000006199	IGF2BP1	100	93.934	Anolis_carolinensis
ENSSSCG00000023128	-	100	99.653	ENSANAG00000022606	IGF2BP1	100	100.000	Aotus_nancymaae
ENSSSCG00000023128	-	100	99.480	ENSBTAG00000011736	IGF2BP1	100	99.480	Bos_taurus
ENSSSCG00000023128	-	100	99.653	ENSCJAG00000007258	IGF2BP1	100	100.000	Callithrix_jacchus
ENSSSCG00000023128	-	100	99.827	ENSCAFG00000016907	IGF2BP1	100	99.827	Canis_familiaris
ENSSSCG00000023128	-	100	99.827	ENSCAFG00020023369	IGF2BP1	100	99.827	Canis_lupus_dingo
ENSSSCG00000023128	-	100	99.480	ENSCHIG00000022316	IGF2BP1	100	99.480	Capra_hircus
ENSSSCG00000023128	-	100	99.653	ENSTSYG00000003912	IGF2BP1	100	100.000	Carlito_syrichta
ENSSSCG00000023128	-	77	97.959	ENSCAPG00000008985	IGF2BP1	100	98.186	Cavia_aperea
ENSSSCG00000023128	-	95	98.355	ENSCPOG00000020174	IGF2BP1	100	98.355	Cavia_porcellus
ENSSSCG00000023128	-	100	96.360	ENSCCAG00000031817	IGF2BP1	100	96.360	Cebus_capucinus
ENSSSCG00000023128	-	100	99.653	ENSCATG00000041707	IGF2BP1	100	100.000	Cercocebus_atys
ENSSSCG00000023128	-	100	98.094	ENSCLAG00000015853	IGF2BP1	100	98.094	Chinchilla_lanigera
ENSSSCG00000023128	-	100	99.653	ENSCSAG00000002487	IGF2BP1	100	99.653	Chlorocebus_sabaeus
ENSSSCG00000023128	-	84	80.913	ENSCHOG00000002349	IGF2BP1	100	80.913	Choloepus_hoffmanni
ENSSSCG00000023128	-	100	85.114	ENSCPBG00000027315	IGF2BP1	100	84.764	Chrysemys_picta_bellii
ENSSSCG00000023128	-	100	99.653	ENSCANG00000032567	IGF2BP1	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000023128	-	77	84.127	ENSCGRG00001003571	-	100	86.395	Cricetulus_griseus_chok1gshd
ENSSSCG00000023128	-	90	89.038	ENSCGRG00001006706	-	97	85.326	Cricetulus_griseus_chok1gshd
ENSSSCG00000023128	-	100	99.653	ENSCGRG00001000282	-	100	99.653	Cricetulus_griseus_chok1gshd
ENSSSCG00000023128	-	100	99.653	ENSCGRG00000014555	Igf2bp1	100	99.653	Cricetulus_griseus_crigri
ENSSSCG00000023128	-	100	95.841	ENSDNOG00000006801	IGF2BP1	100	95.841	Dasypus_novemcinctus
ENSSSCG00000023128	-	100	91.161	ENSDORG00000014371	Igf2bp1	100	91.161	Dipodomys_ordii
ENSSSCG00000023128	-	90	80.502	ENSETEG00000003370	IGF2BP1	100	80.502	Echinops_telfairi
ENSSSCG00000023128	-	100	99.653	ENSEASG00005000301	IGF2BP1	100	99.653	Equus_asinus_asinus
ENSSSCG00000023128	-	100	99.653	ENSECAG00000009723	IGF2BP1	100	99.653	Equus_caballus
ENSSSCG00000023128	-	100	85.442	ENSEEUG00000010947	IGF2BP1	100	85.442	Erinaceus_europaeus
ENSSSCG00000023128	-	100	99.827	ENSFCAG00000002454	IGF2BP1	100	100.000	Felis_catus
ENSSSCG00000023128	-	87	61.014	ENSFALG00000011366	IGF2BP1	100	61.808	Ficedula_albicollis
ENSSSCG00000023128	-	97	94.530	ENSFDAG00000017420	IGF2BP1	100	94.530	Fukomys_damarensis
ENSSSCG00000023128	-	100	93.934	ENSGALG00000041204	IGF2BP1	100	93.934	Gallus_gallus
ENSSSCG00000023128	-	77	85.202	ENSGAGG00000021663	IGF2BP1	100	85.202	Gopherus_agassizii
ENSSSCG00000023128	-	100	99.653	ENSGGOG00000008872	IGF2BP1	100	100.000	Gorilla_gorilla
ENSSSCG00000023128	-	100	98.440	ENSHGLG00000010492	IGF2BP1	100	98.440	Heterocephalus_glaber_female
ENSSSCG00000023128	-	100	98.440	ENSHGLG00100006606	IGF2BP1	100	98.440	Heterocephalus_glaber_male
ENSSSCG00000023128	-	100	99.480	ENSSTOG00000010643	IGF2BP1	100	99.480	Ictidomys_tridecemlineatus
ENSSSCG00000023128	-	100	98.614	ENSJJAG00000002687	Igf2bp1	100	98.614	Jaculus_jaculus
ENSSSCG00000023128	-	100	99.307	ENSLAFG00000002048	IGF2BP1	100	99.307	Loxodonta_africana
ENSSSCG00000023128	-	100	99.653	ENSMFAG00000001613	IGF2BP1	100	100.000	Macaca_fascicularis
ENSSSCG00000023128	-	86	100.000	ENSMMUG00000011533	IGF2BP1	100	100.000	Macaca_mulatta
ENSSSCG00000023128	-	100	99.653	ENSMNEG00000033825	IGF2BP1	100	100.000	Macaca_nemestrina
ENSSSCG00000023128	-	100	99.653	ENSMLEG00000026086	IGF2BP1	100	100.000	Mandrillus_leucophaeus
ENSSSCG00000023128	-	81	94.409	ENSMGAG00000002497	IGF2BP1	100	94.409	Meleagris_gallopavo
ENSSSCG00000023128	-	77	79.955	ENSMICG00000043511	-	99	79.955	Microcebus_murinus
ENSSSCG00000023128	-	100	92.894	ENSMICG00000013324	-	100	99.259	Microcebus_murinus
ENSSSCG00000023128	-	100	99.653	ENSMOCG00000010232	Igf2bp1	100	99.653	Microtus_ochrogaster
ENSSSCG00000023128	-	100	97.400	ENSMODG00000012268	IGF2BP1	100	97.400	Monodelphis_domestica
ENSSSCG00000023128	-	100	98.960	MGP_CAROLIEiJ_G0017016	Igf2bp1	100	98.960	Mus_caroli
ENSSSCG00000023128	-	100	98.960	ENSMUSG00000013415	Igf2bp1	100	98.960	Mus_musculus
ENSSSCG00000023128	-	100	98.960	MGP_SPRETEiJ_G0017862	Igf2bp1	100	98.960	Mus_spretus
ENSSSCG00000023128	-	87	94.862	ENSMPUG00000015358	IGF2BP1	100	94.862	Mustela_putorius_furo
ENSSSCG00000023128	-	71	95.577	ENSMLUG00000016891	-	100	95.577	Myotis_lucifugus
ENSSSCG00000023128	-	83	73.542	ENSMLUG00000023642	-	100	73.542	Myotis_lucifugus
ENSSSCG00000023128	-	100	99.653	ENSNGAG00000015679	Igf2bp1	100	99.653	Nannospalax_galili
ENSSSCG00000023128	-	100	99.653	ENSNLEG00000002786	IGF2BP1	100	100.000	Nomascus_leucogenys
ENSSSCG00000023128	-	79	98.936	ENSMEUG00000002152	-	84	98.936	Notamacropus_eugenii
ENSSSCG00000023128	-	90	94.208	ENSOPRG00000010207	IGF2BP1	100	94.208	Ochotona_princeps
ENSSSCG00000023128	-	100	98.960	ENSODEG00000016991	-	100	98.960	Octodon_degus
ENSSSCG00000023128	-	86	78.958	ENSODEG00000014533	-	92	78.958	Octodon_degus
ENSSSCG00000023128	-	63	82.920	ENSOANG00000014859	-	100	82.920	Ornithorhynchus_anatinus
ENSSSCG00000023128	-	99	99.123	ENSOCUG00000004411	IGF2BP1	100	99.123	Oryctolagus_cuniculus
ENSSSCG00000023128	-	100	99.307	ENSOGAG00000001270	IGF2BP1	100	99.307	Otolemur_garnettii
ENSSSCG00000023128	-	100	99.133	ENSOARG00000006509	IGF2BP1	100	99.133	Ovis_aries
ENSSSCG00000023128	-	100	99.480	ENSPPAG00000040224	IGF2BP1	100	99.480	Pan_paniscus
ENSSSCG00000023128	-	100	99.827	ENSPPRG00000008067	IGF2BP1	100	100.000	Panthera_pardus
ENSSSCG00000023128	-	100	99.827	ENSPTIG00000013291	IGF2BP1	100	100.000	Panthera_tigris_altaica
ENSSSCG00000023128	-	100	99.480	ENSPTRG00000009368	IGF2BP1	100	99.480	Pan_troglodytes
ENSSSCG00000023128	-	100	99.653	ENSPANG00000022833	IGF2BP1	100	100.000	Papio_anubis
ENSSSCG00000023128	-	86	81.474	ENSPSIG00000005175	IGF2BP1	100	81.474	Pelodiscus_sinensis
ENSSSCG00000023128	-	100	99.307	ENSPEMG00000021974	Igf2bp1	100	99.307	Peromyscus_maniculatus_bairdii
ENSSSCG00000023128	-	100	97.400	ENSPCIG00000013111	IGF2BP1	100	97.400	Phascolarctos_cinereus
ENSSSCG00000023128	-	100	99.653	ENSPPYG00000008913	IGF2BP1	100	99.653	Pongo_abelii
ENSSSCG00000023128	-	100	90.641	ENSPCAG00000016601	IGF2BP1	100	90.641	Procavia_capensis
ENSSSCG00000023128	-	100	99.307	ENSPCOG00000006475	IGF2BP1	100	99.307	Propithecus_coquereli
ENSSSCG00000023128	-	100	79.758	ENSPVAG00000001718	IGF2BP1	100	79.758	Pteropus_vampyrus
ENSSSCG00000023128	-	100	99.307	ENSRNOG00000006122	Igf2bp1	100	99.307	Rattus_norvegicus
ENSSSCG00000023128	-	100	99.653	ENSRBIG00000035739	IGF2BP1	100	100.000	Rhinopithecus_bieti
ENSSSCG00000023128	-	100	99.653	ENSRROG00000039581	IGF2BP1	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000023128	-	100	99.480	ENSSBOG00000020973	IGF2BP1	100	99.480	Saimiri_boliviensis_boliviensis
ENSSSCG00000023128	-	100	97.227	ENSSHAG00000014259	IGF2BP1	100	97.227	Sarcophilus_harrisii
ENSSSCG00000023128	-	66	91.118	ENSSARG00000013201	-	73	91.118	Sorex_araneus
ENSSSCG00000023128	-	100	92.334	ENSSPUG00000006526	IGF2BP1	100	92.334	Sphenodon_punctatus
ENSSSCG00000023128	-	100	80.069	ENSTBEG00000004254	IGF2BP1	100	80.069	Tupaia_belangeri
ENSSSCG00000023128	-	100	96.360	ENSTTRG00000007197	IGF2BP1	100	96.360	Tursiops_truncatus
ENSSSCG00000023128	-	100	99.827	ENSUAMG00000023269	IGF2BP1	100	99.827	Ursus_americanus
ENSSSCG00000023128	-	100	99.653	ENSUMAG00000015682	IGF2BP1	100	99.653	Ursus_maritimus
ENSSSCG00000023128	-	78	88.274	ENSVPAG00000007657	IGF2BP1	83	88.274	Vicugna_pacos
ENSSSCG00000023128	-	100	99.827	ENSVVUG00000003451	IGF2BP1	100	99.827	Vulpes_vulpes