EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000023593 (Gene tree)
Gene ID
100739621
Gene Symbol
AFF1
Alias
AF-4|AF4|MLLT2|PBM1
Full Name
AF4/FMR2 family member 1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
183811 bases
Position
chr8:131728873-131912683
Accession
100739621
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000009837AF-4PF05110.13011
ENSSSCP00000021074AF-4PF05110.13012
ENSSSCP00000021074AF-4PF05110.13022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000010103AFF1-2019323XM_021101780ENSSSCP000000098371220 (aa)XP_020957439F1RW30
ENSSSCT00000031231AFF1-2024691XM_021101787ENSSSCP000000210741132 (aa)XP_020957446I3LAK6
Gene Model
Click here to download ENSSSCG00000023593's gene model file
Pathways
Pathway IDPathway NameSource
ssc05202Transcriptional misregulation in cancerKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023593's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000023593AFF16559.459ENSSSCG00000008179REV15859.459
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000023593AFF16171.888ENSG00000172493AFF110078.846Homo_sapiens
ENSSSCG00000023593AFF16558.667ENSG00000144218AFF39247.647Homo_sapiens
ENSSSCG00000023593AFF19976.712ENSAMEG00000003337AFF15874.131Ailuropoda_melanoleuca
ENSSSCG00000023593AFF15677.500ENSACIG00000022732aff25283.871Amphilophus_citrinellus
ENSSSCG00000023593AFF16230.697ENSACIG00000010525aff46030.040Amphilophus_citrinellus
ENSSSCG00000023593AFF19952.484ENSAPLG00000004059AFF15850.140Anas_platyrhynchos
ENSSSCG00000023593AFF18036.754ENSAPLG00000011166AFF45934.819Anas_platyrhynchos
ENSSSCG00000023593AFF19948.848ENSACAG00000012192AFF15849.155Anolis_carolinensis
ENSSSCG00000023593AFF18035.574ENSACAG00000022605AFF45933.610Anolis_carolinensis
ENSSSCG00000023593AFF16171.045ENSANAG00000017095AFF15874.053Aotus_nancymaae
ENSSSCG00000023593AFF18263.889ENSACLG00000011879aff46563.889Astatotilapia_calliptera
ENSSSCG00000023593AFF16182.098ENSBTAG00000018488AFF15881.793Bos_taurus
ENSSSCG00000023593AFF110066.898ENSCJAG00000006047AFF16074.053Callithrix_jacchus
ENSSSCG00000023593AFF17936.233ENSCAFG00000000930AFF46134.129Canis_familiaris
ENSSSCG00000023593AFF16175.458ENSCAFG00000009476AFF15875.246Canis_familiaris
ENSSSCG00000023593AFF16183.310ENSCHIG00000008450AFF15982.725Capra_hircus
ENSSSCG00000023593AFF15856.757ENSCAPG00000012999AFF36445.565Cavia_aperea
ENSSSCG00000023593AFF19958.623ENSCAPG00000006540AFF15959.775Cavia_aperea
ENSSSCG00000023593AFF19963.614ENSCPOG00000034568AFF15864.276Cavia_porcellus
ENSSSCG00000023593AFF15856.757ENSCPOG00000006346AFF37457.333Cavia_porcellus
ENSSSCG00000023593AFF19667.669ENSCCAG00000027623AFF19777.273Cebus_capucinus
ENSSSCG00000023593AFF19671.859ENSCATG00000039501AFF16074.614Cercocebus_atys
ENSSSCG00000023593AFF18035.393ENSCATG00000044510AFF45934.222Cercocebus_atys
ENSSSCG00000023593AFF15859.459ENSCLAG00000017100AFF37460.000Chinchilla_lanigera
ENSSSCG00000023593AFF19962.700ENSCLAG00000005537AFF15962.207Chinchilla_lanigera
ENSSSCG00000023593AFF18035.460ENSCSAG00000013682AFF46033.709Chlorocebus_sabaeus
ENSSSCG00000023593AFF16172.599ENSCSAG00000004333AFF15874.334Chlorocebus_sabaeus
ENSSSCG00000023593AFF17775.845ENSCHOG00000000041AFF16777.273Choloepus_hoffmanni
ENSSSCG00000023593AFF15937.960ENSCPBG00000016541-8345.267Chrysemys_picta_bellii
ENSSSCG00000023593AFF110054.538ENSCPBG00000005382AFF15853.621Chrysemys_picta_bellii
ENSSSCG00000023593AFF18035.565ENSCANG00000030350AFF46033.850Colobus_angolensis_palliatus
ENSSSCG00000023593AFF19670.455ENSCANG00000037514AFF15874.194Colobus_angolensis_palliatus
ENSSSCG00000023593AFF16164.159ENSCGRG00000004837Aff18563.923Cricetulus_griseus_crigri
ENSSSCG00000023593AFF16556.757ENSCGRG00000003408Aff37457.333Cricetulus_griseus_crigri
ENSSSCG00000023593AFF15563.077ENSCSEG00000017002aff48063.077Cynoglossus_semilaevis
ENSSSCG00000023593AFF17173.732ENSDNOG00000048783-8173.810Dasypus_novemcinctus
ENSSSCG00000023593AFF17935.638ENSDNOG00000016669AFF46033.848Dasypus_novemcinctus
ENSSSCG00000023593AFF16169.774ENSDORG00000013881Aff15871.268Dipodomys_ordii
ENSSSCG00000023593AFF19484.524ENSETEG00000014905AFF18966.807Echinops_telfairi
ENSSSCG00000023593AFF17059.649ENSEBUG00000012097aff45353.750Eptatretus_burgeri
ENSSSCG00000023593AFF15248.603ENSEASG00005018275AFF36442.105Equus_asinus_asinus
ENSSSCG00000023593AFF110071.767ENSEASG00005012760AFF15874.545Equus_asinus_asinus
ENSSSCG00000023593AFF110073.484ENSECAG00000003619AFF19380.804Equus_caballus
ENSSSCG00000023593AFF16264.706ENSECAG00000006249AFF35764.706Equus_caballus
ENSSSCG00000023593AFF16657.143ENSEEUG00000011214AFF45657.143Erinaceus_europaeus
ENSSSCG00000023593AFF17495.000ENSEEUG00000013664-6995.000Erinaceus_europaeus
ENSSSCG00000023593AFF18363.380ENSELUG00000023871aff46763.380Esox_lucius
ENSSSCG00000023593AFF17936.029ENSFALG00000008916AFF45933.476Ficedula_albicollis
ENSSSCG00000023593AFF15744.180ENSFALG00000005554AFF15744.367Ficedula_albicollis
ENSSSCG00000023593AFF17238.272ENSFALG00000012089AFF25652.976Ficedula_albicollis
ENSSSCG00000023593AFF19965.045ENSFDAG00000018846AFF15764.185Fukomys_damarensis
ENSSSCG00000023593AFF16739.096ENSFHEG00000004526aff45257.018Fundulus_heteroclitus
ENSSSCG00000023593AFF19157.143ENSGALG00000043935AFF16144.630Gallus_gallus
ENSSSCG00000023593AFF18351.948ENSGALG00000009168AFF25551.948Gallus_gallus
ENSSSCG00000023593AFF17936.677ENSGALG00000030147AFF46234.473Gallus_gallus
ENSSSCG00000023593AFF18558.209ENSGACG00000016333-5262.687Gasterosteus_aculeatus
ENSSSCG00000023593AFF18261.194ENSGACG00000020734aff46561.194Gasterosteus_aculeatus
ENSSSCG00000023593AFF18036.598ENSGAGG00000020214AFF45935.014Gopherus_agassizii
ENSSSCG00000023593AFF16130.955ENSGAGG00000024801-7344.898Gopherus_agassizii
ENSSSCG00000023593AFF19970.787ENSGGOG00000008497AFF15874.402Gorilla_gorilla
ENSSSCG00000023593AFF18263.889ENSHBUG00000021987aff46563.889Haplochromis_burtoni
ENSSSCG00000023593AFF15440.196ENSHGLG00000005004-6737.860Heterocephalus_glaber_female
ENSSSCG00000023593AFF18264.062ENSHCOG00000016280aff46564.062Hippocampus_comes
ENSSSCG00000023593AFF16559.459ENSSTOG00000012140AFF36960.000Ictidomys_tridecemlineatus
ENSSSCG00000023593AFF16176.090ENSSTOG00000006530AFF15876.438Ictidomys_tridecemlineatus
ENSSSCG00000023593AFF15859.459ENSJJAG00000013155Aff37460.000Jaculus_jaculus
ENSSSCG00000023593AFF19964.711ENSJJAG00000022877Aff15965.928Jaculus_jaculus
ENSSSCG00000023593AFF15651.880ENSKMAG00000013113-5751.724Kryptolebias_marmoratus
ENSSSCG00000023593AFF19947.087ENSLACG00000007303AFF15845.467Latimeria_chalumnae
ENSSSCG00000023593AFF15142.424ENSLACG00000010860aff26345.492Latimeria_chalumnae
ENSSSCG00000023593AFF17737.269ENSLOCG00000010610aff45833.148Lepisosteus_oculatus
ENSSSCG00000023593AFF17068.590ENSLOCG00000004025AFF16337.047Lepisosteus_oculatus
ENSSSCG00000023593AFF18640.530ENSLAFG00000018691AFF28537.410Loxodonta_africana
ENSSSCG00000023593AFF18035.393ENSMFAG00000034615AFF45934.222Macaca_fascicularis
ENSSSCG00000023593AFF19671.993ENSMFAG00000037700AFF16174.755Macaca_fascicularis
ENSSSCG00000023593AFF19971.475ENSMMUG00000014076AFF19774.382Macaca_mulatta
ENSSSCG00000023593AFF18035.393ENSMMUG00000015640AFF48133.600Macaca_mulatta
ENSSSCG00000023593AFF18035.393ENSMNEG00000033381AFF45934.222Macaca_nemestrina
ENSSSCG00000023593AFF19672.027ENSMNEG00000031536AFF15874.614Macaca_nemestrina
ENSSSCG00000023593AFF16173.023ENSMLEG00000039099AFF15874.755Mandrillus_leucophaeus
ENSSSCG00000023593AFF18263.889ENSMAMG00000021453aff46463.889Mastacembelus_armatus
ENSSSCG00000023593AFF18263.889ENSMZEG00005003218aff46563.889Maylandia_zebra
ENSSSCG00000023593AFF19946.752ENSMGAG00000007646AFF15744.600Meleagris_gallopavo
ENSSSCG00000023593AFF16134.699ENSMGAG00000008246-9232.487Meleagris_gallopavo
ENSSSCG00000023593AFF17937.882ENSMGAG00000009144AFF46134.972Meleagris_gallopavo
ENSSSCG00000023593AFF16164.560ENSMAUG00000010241Aff15963.824Mesocricetus_auratus
ENSSSCG00000023593AFF17649.275ENSMAUG00000013669Aff47949.275Mesocricetus_auratus
ENSSSCG00000023593AFF17935.714ENSMICG00000002753-6432.633Microcebus_murinus
ENSSSCG00000023593AFF19962.014ENSMOCG00000017389Aff16061.905Microtus_ochrogaster
ENSSSCG00000023593AFF17264.062ENSMMOG00000013763aff46164.062Mola_mola
ENSSSCG00000023593AFF19954.936ENSMODG00000020745AFF15651.473Monodelphis_domestica
ENSSSCG00000023593AFF16936.658ENSMODG00000005570AFF25139.375Monodelphis_domestica
ENSSSCG00000023593AFF18036.991ENSMODG00000013842AFF45935.028Monodelphis_domestica
ENSSSCG00000023593AFF17936.402MGP_CAROLIEiJ_G0016331Aff45758.571Mus_caroli
ENSSSCG00000023593AFF17936.190ENSMUSG00000049470Aff45758.571Mus_musculus
ENSSSCG00000023593AFF16556.757ENSMUSG00000037138Aff36357.333Mus_musculus
ENSSSCG00000023593AFF110063.384MGP_PahariEiJ_G0017247Aff15962.055Mus_pahari
ENSSSCG00000023593AFF17936.345MGP_PahariEiJ_G0017466Aff45758.571Mus_pahari
ENSSSCG00000023593AFF17936.190MGP_SPRETEiJ_G0017175Aff45758.571Mus_spretus
ENSSSCG00000023593AFF110063.246MGP_SPRETEiJ_G0028466Aff18073.913Mus_spretus
ENSSSCG00000023593AFF16173.757ENSMPUG00000002270AFF15873.416Mustela_putorius_furo
ENSSSCG00000023593AFF17934.783ENSMPUG00000010316AFF46032.349Mustela_putorius_furo
ENSSSCG00000023593AFF17934.611ENSMLUG00000015081AFF45933.568Myotis_lucifugus
ENSSSCG00000023593AFF15758.108ENSNGAG00000002408Aff36358.667Nannospalax_galili
ENSSSCG00000023593AFF110068.100ENSNLEG00000009429AFF15973.773Nomascus_leucogenys
ENSSSCG00000023593AFF18649.925ENSMEUG00000003076-8550.226Notamacropus_eugenii
ENSSSCG00000023593AFF17046.784ENSMEUG00000014599AFF25047.771Notamacropus_eugenii
ENSSSCG00000023593AFF110068.087ENSOPRG00000017154-5868.112Ochotona_princeps
ENSSSCG00000023593AFF19364.000ENSODEG00000007407AFF15476.667Octodon_degus
ENSSSCG00000023593AFF15840.226ENSOANG00000001095-6544.361Ornithorhynchus_anatinus
ENSSSCG00000023593AFF16156.588ENSOANG00000013624AFF16057.242Ornithorhynchus_anatinus
ENSSSCG00000023593AFF17935.497ENSOCUG00000013635AFF45934.605Oryctolagus_cuniculus
ENSSSCG00000023593AFF16168.547ENSOCUG00000002105AFF15569.198Oryctolagus_cuniculus
ENSSSCG00000023593AFF16364.179ENSORLG00020003991-7164.179Oryzias_latipes_hni
ENSSSCG00000023593AFF17360.542ENSOGAG00000031211-8358.640Otolemur_garnettii
ENSSSCG00000023593AFF17935.518ENSOGAG00000028482AFF46033.880Otolemur_garnettii
ENSSSCG00000023593AFF19980.663ENSOARG00000004522AFF15882.841Ovis_aries
ENSSSCG00000023593AFF19970.484ENSPPAG00000029196AFF15874.507Pan_paniscus
ENSSSCG00000023593AFF16175.634ENSPPRG00000023590AFF15875.281Panthera_pardus
ENSSSCG00000023593AFF17678.395ENSPTIG00000011838AFF19177.778Panthera_tigris_altaica
ENSSSCG00000023593AFF16746.286ENSPTRG00000046486-7253.416Pan_troglodytes
ENSSSCG00000023593AFF19970.484ENSPTRG00000016255AFF17786.905Pan_troglodytes
ENSSSCG00000023593AFF18035.393ENSPANG00000007039AFF45934.222Papio_anubis
ENSSSCG00000023593AFF19869.547ENSPANG00000016722AFF15872.478Papio_anubis
ENSSSCG00000023593AFF18033.848ENSPKIG00000024249AFF45831.983Paramormyrops_kingsleyae
ENSSSCG00000023593AFF15359.184ENSPKIG00000007777-6855.952Paramormyrops_kingsleyae
ENSSSCG00000023593AFF18356.716ENSPKIG00000024325AFF46657.576Paramormyrops_kingsleyae
ENSSSCG00000023593AFF110051.882ENSPSIG00000003759AFF15952.327Pelodiscus_sinensis
ENSSSCG00000023593AFF16835.746ENSPSIG00000010309AFF26137.295Pelodiscus_sinensis
ENSSSCG00000023593AFF18036.336ENSPSIG00000013003AFF45834.075Pelodiscus_sinensis
ENSSSCG00000023593AFF16555.405ENSPEMG00000014802Aff37456.000Peromyscus_maniculatus_bairdii
ENSSSCG00000023593AFF110060.918ENSPEMG00000000785Aff15861.180Peromyscus_maniculatus_bairdii
ENSSSCG00000023593AFF19480.645ENSPCIG00000011395AFF16963.953Phascolarctos_cinereus
ENSSSCG00000023593AFF18353.425ENSPCIG00000030054AFF25238.182Phascolarctos_cinereus
ENSSSCG00000023593AFF18036.335ENSPCIG00000000197AFF45934.545Phascolarctos_cinereus
ENSSSCG00000023593AFF15661.194ENSPFOG00000004581-5661.194Poecilia_formosa
ENSSSCG00000023593AFF15047.514ENSPLAG00000012910-5352.713Poecilia_latipinna
ENSSSCG00000023593AFF16354.286ENSPLAG00000005101aff25054.286Poecilia_latipinna
ENSSSCG00000023593AFF15461.194ENSPREG00000003514-5761.194Poecilia_reticulata
ENSSSCG00000023593AFF16169.024ENSPPYG00000014910AFF15770.968Pongo_abelii
ENSSSCG00000023593AFF17658.571ENSPCAG00000003995AFF46033.884Procavia_capensis
ENSSSCG00000023593AFF17593.478ENSPCAG00000005658AFF15393.478Procavia_capensis
ENSSSCG00000023593AFF19771.072ENSPCOG00000027339AFF15573.551Propithecus_coquereli
ENSSSCG00000023593AFF19577.992ENSPVAG00000014455AFF17474.895Pteropus_vampyrus
ENSSSCG00000023593AFF18263.889ENSPNYG00000014804aff46563.889Pundamilia_nyererei
ENSSSCG00000023593AFF16558.108ENSRBIG00000029993AFF35758.108Rhinopithecus_bieti
ENSSSCG00000023593AFF17735.565ENSRBIG00000029376AFF46133.850Rhinopithecus_bieti
ENSSSCG00000023593AFF110075.181ENSRBIG00000032242AFF15973.913Rhinopithecus_bieti
ENSSSCG00000023593AFF110075.121ENSRROG00000045716AFF15874.053Rhinopithecus_roxellana
ENSSSCG00000023593AFF16558.667ENSRROG00000033773AFF36658.108Rhinopithecus_roxellana
ENSSSCG00000023593AFF18035.565ENSRROG00000033812AFF49132.107Rhinopithecus_roxellana
ENSSSCG00000023593AFF110065.679ENSSBOG00000035401AFF18972.464Saimiri_boliviensis_boliviensis
ENSSSCG00000023593AFF19954.960ENSSHAG00000004203AFF15754.149Sarcophilus_harrisii
ENSSSCG00000023593AFF16131.068ENSSHAG00000009556AFF29030.252Sarcophilus_harrisii
ENSSSCG00000023593AFF18037.846ENSSHAG00000013198AFF46034.177Sarcophilus_harrisii
ENSSSCG00000023593AFF15142.797ENSSFOG00015009105-5046.226Scleropages_formosus
ENSSSCG00000023593AFF16235.695ENSSFOG00015000846AFF48934.705Scleropages_formosus
ENSSSCG00000023593AFF16376.056ENSSFOG00015021743-7831.908Scleropages_formosus
ENSSSCG00000023593AFF18034.568ENSSDUG00000019498aff45933.240Seriola_dumerili
ENSSSCG00000023593AFF16263.077ENSSLDG00000007683aff45933.240Seriola_lalandi_dorsalis
ENSSSCG00000023593AFF15353.868ENSSARG00000013296-7752.722Sorex_araneus
ENSSSCG00000023593AFF19953.006ENSSPUG00000001574AFF15753.911Sphenodon_punctatus
ENSSSCG00000023593AFF16130.789ENSSPUG00000009604AFF35835.223Sphenodon_punctatus
ENSSSCG00000023593AFF16936.241ENSSPAG00000012370aff48833.333Stegastes_partitus
ENSSSCG00000023593AFF19943.910ENSTGUG00000002726AFF19043.803Taeniopygia_guttata
ENSSSCG00000023593AFF17936.296ENSTGUG00000000187AFF46033.523Taeniopygia_guttata
ENSSSCG00000023593AFF19973.501ENSTBEG00000007536AFF15873.773Tupaia_belangeri
ENSSSCG00000023593AFF16658.667ENSTTRG00000014061AFF35858.667Tursiops_truncatus
ENSSSCG00000023593AFF16184.375ENSTTRG00000005595AFF15885.085Tursiops_truncatus
ENSSSCG00000023593AFF19173.048ENSUMAG00000025433AFF18477.159Ursus_maritimus
ENSSSCG00000023593AFF16179.433ENSVPAG00000004007AFF15879.574Vicugna_pacos
ENSSSCG00000023593AFF19977.841ENSVVUG00000009263AFF15875.387Vulpes_vulpes
ENSSSCG00000023593AFF17936.233ENSVVUG00000024524AFF46134.129Vulpes_vulpes
ENSSSCG00000023593AFF19943.516ENSXETG00000019955aff15941.702Xenopus_tropicalis
ENSSSCG00000023593AFF16131.461ENSXCOG00000006385aff47933.891Xiphophorus_couchianus
ENSSSCG00000023593AFF15459.701ENSXMAG00000004657-6459.701Xiphophorus_maculatus

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