EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000023792 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 15904 bases
Position: chr6:54288367-54304270
Accession: 100628160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025619	RRM_1	PF00076.22	2e-13	1	1
ENSSSCP00000053722	RRM_1	PF00076.22	2e-13	1	1
ENSSSCP00000043949	RRM_1	PF00076.22	2.9e-13	1	1
ENSSSCP00000025619	U1snRNP70_N	PF12220.8	1.2e-28	1	1
ENSSSCP00000053722	U1snRNP70_N	PF12220.8	1.2e-28	1	1
ENSSSCP00000043949	U1snRNP70_N	PF12220.8	3.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000050309	-	2566	-	ENSSSCP00000053722	166 (aa)	-	I3LNE5
ENSSSCT00000022304	-	4275	XM_021094709	ENSSSCP00000025619	166 (aa)	XP_020950368	I3LNE5
ENSSSCT00000044973	-	3573	-	ENSSSCP00000043949	202 (aa)	-	A0A287AJ85

Gene Model

Click here to download ENSSSCG00000023792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023792	-	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSSSCG00000023792	-	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSSSCG00000023792	-	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSSSCG00000023792	-	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSSSCG00000023792	-	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSSSCG00000023792	-	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSSSCG00000023792	-	100	95.833	ENSCAFG00020025470	SNRNP70	100	95.833	Canis_lupus_dingo
ENSSSCG00000023792	-	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSSSCG00000023792	-	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSSSCG00000023792	-	99	97.561	ENSCANG00000036607	SNRNP70	66	97.561	Colobus_angolensis_palliatus
ENSSSCG00000023792	-	99	88.415	ENSCSEG00000011978	snrnp70	73	88.415	Cynoglossus_semilaevis
ENSSSCG00000023792	-	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSSSCG00000023792	-	99	86.585	ENSDARG00000077126	snrnp70	99	88.125	Danio_rerio
ENSSSCG00000023792	-	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSSSCG00000023792	-	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSSSCG00000023792	-	99	87.805	ENSGMOG00000011492	snrnp70	72	87.805	Gadus_morhua
ENSSSCG00000023792	-	99	88.415	ENSGACG00000000448	snrnp70	52	88.415	Gasterosteus_aculeatus
ENSSSCG00000023792	-	96	80.597	ENSGAGG00000012628	SNRNP70	99	80.597	Gopherus_agassizii
ENSSSCG00000023792	-	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSSSCG00000023792	-	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSSSCG00000023792	-	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000023792	-	99	97.561	ENSLAFG00000028536	SNRNP70	71	97.561	Loxodonta_africana
ENSSSCG00000023792	-	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSSSCG00000023792	-	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSSSCG00000023792	-	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSSSCG00000023792	-	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSSSCG00000023792	-	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSSSCG00000023792	-	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSSSCG00000023792	-	99	89.024	ENSNBRG00000003126	snrnp70	70	89.024	Neolamprologus_brichardi
ENSSSCG00000023792	-	95	97.468	ENSNLEG00000004899	SNRNP70	63	97.468	Nomascus_leucogenys
ENSSSCG00000023792	-	99	96.951	ENSOANG00000005213	SNRNP70	72	96.951	Ornithorhynchus_anatinus
ENSSSCG00000023792	-	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSSSCG00000023792	-	58	69.231	ENSPTIG00000018250	-	79	100.000	Panthera_tigris_altaica
ENSSSCG00000023792	-	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSSSCG00000023792	-	96	80.503	ENSPKIG00000019992	snrnp70	84	80.503	Paramormyrops_kingsleyae
ENSSSCG00000023792	-	98	96.296	ENSPSIG00000015251	SNRNP70	65	96.296	Pelodiscus_sinensis
ENSSSCG00000023792	-	96	90.566	ENSPMGG00000010153	snrnp70	76	90.566	Periophthalmus_magnuspinnatus
ENSSSCG00000023792	-	99	79.878	ENSPMAG00000008502	snrnp70	85	79.878	Petromyzon_marinus
ENSSSCG00000023792	-	99	85.976	ENSPCOG00000023103	SNRNP70	57	85.976	Propithecus_coquereli
ENSSSCG00000023792	-	99	97.561	ENSRBIG00000042387	SNRNP70	61	97.561	Rhinopithecus_bieti
ENSSSCG00000023792	-	99	97.561	ENSRROG00000033636	SNRNP70	61	97.561	Rhinopithecus_roxellana
ENSSSCG00000023792	-	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000023792	-	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSSSCG00000023792	-	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSSSCG00000023792	-	79	99.237	ENSVPAG00000005959	-	59	99.237	Vicugna_pacos
ENSSSCG00000023792	-	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes