EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000023880 (Gene tree)
Gene ID: 100623550
Gene Symbol: RRP8
Alias: KIAA0409|NML
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5745 bases
Position: chr9:3150877-3156621
Accession: 100623550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000026041	Methyltransf_8	PF05148.15	2.1e-103	1	1
ENSSSCP00000038984	Methyltransf_8	PF05148.15	2.3e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000022514	RRP8-202	1674	XM_003357134	ENSSSCP00000026041	459 (aa)	XP_003357182	I3LPL4
ENSSSCT00000041107	RRP8-201	1788	-	ENSSSCP00000038984	478 (aa)	-	A0A287A4T9

Gene Model

Click here to download ENSSSCG00000023880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023880	RRP8	100	76.906	ENSG00000132275	RRP8	100	77.342	Homo_sapiens
ENSSSCG00000023880	RRP8	96	78.507	ENSAMEG00000016307	RRP8	100	76.739	Ailuropoda_melanoleuca
ENSSSCG00000023880	RRP8	100	77.996	ENSANAG00000028524	RRP8	100	77.778	Aotus_nancymaae
ENSSSCG00000023880	RRP8	79	42.553	ENSAMXG00000005164	rrp8	81	41.706	Astyanax_mexicanus
ENSSSCG00000023880	RRP8	100	79.565	ENSBTAG00000000697	RRP8	100	79.348	Bos_taurus
ENSSSCG00000023880	RRP8	53	43.852	WBGene00020296	T07A9.8	82	40.397	Caenorhabditis_elegans
ENSSSCG00000023880	RRP8	100	76.471	ENSCJAG00000014012	RRP8	100	76.906	Callithrix_jacchus
ENSSSCG00000023880	RRP8	100	77.826	ENSCAFG00000006476	RRP8	68	76.739	Canis_familiaris
ENSSSCG00000023880	RRP8	100	77.826	ENSCAFG00020009685	RRP8	100	76.739	Canis_lupus_dingo
ENSSSCG00000023880	RRP8	100	78.261	ENSCHIG00000019002	RRP8	94	78.261	Capra_hircus
ENSSSCG00000023880	RRP8	100	76.087	ENSTSYG00000003391	RRP8	100	75.870	Carlito_syrichta
ENSSSCG00000023880	RRP8	84	71.907	ENSCAPG00000013284	RRP8	100	70.876	Cavia_aperea
ENSSSCG00000023880	RRP8	100	73.913	ENSCPOG00000012515	RRP8	100	74.783	Cavia_porcellus
ENSSSCG00000023880	RRP8	100	77.560	ENSCCAG00000035197	RRP8	100	77.342	Cebus_capucinus
ENSSSCG00000023880	RRP8	100	75.817	ENSCATG00000029344	RRP8	100	75.599	Cercocebus_atys
ENSSSCG00000023880	RRP8	100	73.913	ENSCLAG00000016099	RRP8	100	72.826	Chinchilla_lanigera
ENSSSCG00000023880	RRP8	100	75.599	ENSCSAG00000004345	RRP8	100	75.381	Chlorocebus_sabaeus
ENSSSCG00000023880	RRP8	52	50.207	ENSCSAVG00000006435	-	59	50.207	Ciona_savignyi
ENSSSCG00000023880	RRP8	100	75.817	ENSCANG00000040771	RRP8	100	75.599	Colobus_angolensis_palliatus
ENSSSCG00000023880	RRP8	100	71.895	ENSCGRG00001003103	Rrp8	100	70.588	Cricetulus_griseus_chok1gshd
ENSSSCG00000023880	RRP8	100	71.678	ENSCGRG00000014009	Rrp8	100	70.370	Cricetulus_griseus_crigri
ENSSSCG00000023880	RRP8	60	53.623	ENSCSEG00000007330	rrp8	57	60.090	Cynoglossus_semilaevis
ENSSSCG00000023880	RRP8	52	54.472	ENSDARG00000071652	rrp8	80	58.772	Danio_rerio
ENSSSCG00000023880	RRP8	95	77.854	ENSDNOG00000000812	RRP8	91	76.139	Dasypus_novemcinctus
ENSSSCG00000023880	RRP8	100	71.024	ENSDORG00000000103	Rrp8	100	70.588	Dipodomys_ordii
ENSSSCG00000023880	RRP8	54	40.323	FBgn0034422	CG7137	61	42.152	Drosophila_melanogaster
ENSSSCG00000023880	RRP8	95	74.828	ENSETEG00000008877	RRP8	100	73.536	Echinops_telfairi
ENSSSCG00000023880	RRP8	96	81.859	ENSEASG00005001761	RRP8	100	81.046	Equus_asinus_asinus
ENSSSCG00000023880	RRP8	88	80.597	ENSECAG00000006612	RRP8	83	79.762	Equus_caballus
ENSSSCG00000023880	RRP8	96	77.303	ENSFCAG00000015384	RRP8	100	76.242	Felis_catus
ENSSSCG00000023880	RRP8	100	72.391	ENSFDAG00000008872	RRP8	100	71.087	Fukomys_damarensis
ENSSSCG00000023880	RRP8	60	52.518	ENSGACG00000011343	rrp8	66	56.098	Gasterosteus_aculeatus
ENSSSCG00000023880	RRP8	92	45.747	ENSGAGG00000005261	RRP8	60	59.459	Gopherus_agassizii
ENSSSCG00000023880	RRP8	100	78.431	ENSGGOG00000000389	RRP8	100	77.560	Gorilla_gorilla
ENSSSCG00000023880	RRP8	100	72.826	ENSHGLG00000003980	RRP8	100	71.522	Heterocephalus_glaber_female
ENSSSCG00000023880	RRP8	100	72.826	ENSHGLG00100015659	RRP8	100	71.522	Heterocephalus_glaber_male
ENSSSCG00000023880	RRP8	100	75.000	ENSSTOG00000016272	RRP8	100	74.783	Ictidomys_tridecemlineatus
ENSSSCG00000023880	RRP8	96	76.802	ENSJJAG00000020608	-	100	75.705	Jaculus_jaculus
ENSSSCG00000023880	RRP8	63	51.034	ENSLBEG00000019937	rrp8	60	57.203	Labrus_bergylta
ENSSSCG00000023880	RRP8	54	58.893	ENSLACG00000001252	-	63	59.756	Latimeria_chalumnae
ENSSSCG00000023880	RRP8	59	51.111	ENSLOCG00000009591	rrp8	51	51.111	Lepisosteus_oculatus
ENSSSCG00000023880	RRP8	100	75.705	ENSLAFG00000000112	RRP8	100	75.705	Loxodonta_africana
ENSSSCG00000023880	RRP8	100	76.471	ENSMFAG00000046084	RRP8	100	76.253	Macaca_fascicularis
ENSSSCG00000023880	RRP8	100	76.253	ENSMMUG00000007738	RRP8	100	76.035	Macaca_mulatta
ENSSSCG00000023880	RRP8	100	76.253	ENSMNEG00000029648	RRP8	100	76.035	Macaca_nemestrina
ENSSSCG00000023880	RRP8	100	76.471	ENSMLEG00000035110	RRP8	100	76.253	Mandrillus_leucophaeus
ENSSSCG00000023880	RRP8	100	69.762	ENSMAUG00000000324	Rrp8	100	69.114	Mesocricetus_auratus
ENSSSCG00000023880	RRP8	96	75.000	ENSMICG00000038472	RRP8	100	74.510	Microcebus_murinus
ENSSSCG00000023880	RRP8	100	72.331	ENSMOCG00000002486	Rrp8	100	71.895	Microtus_ochrogaster
ENSSSCG00000023880	RRP8	100	72.234	MGP_CAROLIEiJ_G0030236	Rrp8	100	71.957	Mus_caroli
ENSSSCG00000023880	RRP8	100	71.739	ENSMUSG00000030888	Rrp8	100	71.739	Mus_musculus
ENSSSCG00000023880	RRP8	100	71.957	MGP_PahariEiJ_G0013451	Rrp8	100	71.957	Mus_pahari
ENSSSCG00000023880	RRP8	100	71.957	MGP_SPRETEiJ_G0031348	Rrp8	100	71.957	Mus_spretus
ENSSSCG00000023880	RRP8	100	77.391	ENSMPUG00000005510	RRP8	100	75.435	Mustela_putorius_furo
ENSSSCG00000023880	RRP8	100	79.085	ENSMLUG00000008938	RRP8	100	78.867	Myotis_lucifugus
ENSSSCG00000023880	RRP8	100	75.163	ENSNGAG00000012450	Rrp8	100	74.946	Nannospalax_galili
ENSSSCG00000023880	RRP8	54	53.968	ENSNBRG00000023416	rrp8	77	62.037	Neolamprologus_brichardi
ENSSSCG00000023880	RRP8	100	75.381	ENSNLEG00000017445	RRP8	100	75.381	Nomascus_leucogenys
ENSSSCG00000023880	RRP8	60	66.182	ENSMEUG00000004945	-	100	63.475	Notamacropus_eugenii
ENSSSCG00000023880	RRP8	96	74.661	ENSOPRG00000008052	RRP8	100	74.026	Ochotona_princeps
ENSSSCG00000023880	RRP8	100	75.000	ENSODEG00000011209	RRP8	100	73.913	Octodon_degus
ENSSSCG00000023880	RRP8	100	76.087	ENSOCUG00000027619	RRP8	100	75.000	Oryctolagus_cuniculus
ENSSSCG00000023880	RRP8	96	75.682	ENSOGAG00000007184	RRP8	100	74.074	Otolemur_garnettii
ENSSSCG00000023880	RRP8	100	78.478	ENSOARG00000017435	RRP8	70	78.478	Ovis_aries
ENSSSCG00000023880	RRP8	100	77.124	ENSPPAG00000040792	RRP8	100	77.560	Pan_paniscus
ENSSSCG00000023880	RRP8	96	78.733	ENSPPRG00000022654	RRP8	100	77.609	Panthera_pardus
ENSSSCG00000023880	RRP8	96	78.507	ENSPTIG00000011321	RRP8	100	77.391	Panthera_tigris_altaica
ENSSSCG00000023880	RRP8	100	76.906	ENSPTRG00000003297	RRP8	100	77.342	Pan_troglodytes
ENSSSCG00000023880	RRP8	100	76.253	ENSPANG00000006537	RRP8	100	76.035	Papio_anubis
ENSSSCG00000023880	RRP8	100	72.331	ENSPEMG00000017257	Rrp8	100	71.460	Peromyscus_maniculatus_bairdii
ENSSSCG00000023880	RRP8	100	76.688	ENSPPYG00000003538	RRP8	100	77.124	Pongo_abelii
ENSSSCG00000023880	RRP8	100	75.488	ENSPCAG00000016176	RRP8	100	74.403	Procavia_capensis
ENSSSCG00000023880	RRP8	96	78.182	ENSPCOG00000024627	RRP8	100	76.688	Propithecus_coquereli
ENSSSCG00000023880	RRP8	100	77.778	ENSPVAG00000002420	RRP8	100	77.778	Pteropus_vampyrus
ENSSSCG00000023880	RRP8	100	71.522	ENSRNOG00000018766	Rrp8	100	91.628	Rattus_norvegicus
ENSSSCG00000023880	RRP8	100	75.817	ENSRBIG00000044485	RRP8	100	75.599	Rhinopithecus_bieti
ENSSSCG00000023880	RRP8	100	75.381	ENSRROG00000045322	RRP8	100	75.163	Rhinopithecus_roxellana
ENSSSCG00000023880	RRP8	100	77.778	ENSSBOG00000035280	RRP8	100	77.778	Saimiri_boliviensis_boliviensis
ENSSSCG00000023880	RRP8	62	68.601	ENSSHAG00000009273	-	84	52.466	Sarcophilus_harrisii
ENSSSCG00000023880	RRP8	100	74.292	ENSSARG00000007949	RRP8	100	74.074	Sorex_araneus
ENSSSCG00000023880	RRP8	55	57.874	ENSSPAG00000006664	rrp8	79	65.455	Stegastes_partitus
ENSSSCG00000023880	RRP8	93	76.761	ENSTBEG00000000237	RRP8	100	78.169	Tupaia_belangeri
ENSSSCG00000023880	RRP8	100	81.739	ENSTTRG00000004867	RRP8	100	81.304	Tursiops_truncatus
ENSSSCG00000023880	RRP8	96	78.281	ENSUAMG00000025756	RRP8	100	76.522	Ursus_americanus
ENSSSCG00000023880	RRP8	96	78.054	ENSUMAG00000000528	RRP8	96	76.304	Ursus_maritimus
ENSSSCG00000023880	RRP8	100	82.646	ENSVPAG00000008019	RRP8	100	83.297	Vicugna_pacos
ENSSSCG00000023880	RRP8	100	75.000	ENSVVUG00000024346	RRP8	100	73.950	Vulpes_vulpes
ENSSSCG00000023880	RRP8	58	54.924	ENSXCOG00000006156	rrp8	61	58.824	Xiphophorus_couchianus