EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000023976 (Gene tree)
Gene ID: 100620800
Gene Symbol: -
Alias: -
Full Name: decapping mRNA 1B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 53571 bases
Position: chr5:68922437-68976007
Accession: 100620800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000022381	DCP1	PF06058.13	2e-42	1	1
ENSSSCP00000056488	DCP1	PF06058.13	3.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052044	-	2943	-	ENSSSCP00000056488	116 (aa)	-	A0A287BK03
ENSSSCT00000028544	-	3387	XM_003355609	ENSSSCP00000022381	559 (aa)	XP_003355657	I3LE95

Gene Model

Click here to download ENSSSCG00000023976's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000023976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000023976	-	88	52.941	ENSSSCG00000038481	-	95	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000023976	-	91	92.453	ENSG00000151065	DCP1B	78	95.699	Homo_sapiens
ENSSSCG00000023976	-	84	94.898	ENSAMEG00000004141	DCP1B	98	66.063	Ailuropoda_melanoleuca
ENSSSCG00000023976	-	84	82.474	ENSACIG00000018524	-	83	83.696	Amphilophus_citrinellus
ENSSSCG00000023976	-	91	77.982	ENSAOCG00000024199	dcp1b	65	63.180	Amphiprion_ocellaris
ENSSSCG00000023976	-	91	77.982	ENSAPEG00000004530	dcp1b	65	62.500	Amphiprion_percula
ENSSSCG00000023976	-	90	78.846	ENSATEG00000015045	dcp1b	74	48.611	Anabas_testudineus
ENSSSCG00000023976	-	91	90.566	ENSAPLG00000004762	DCP1B	98	56.837	Anas_platyrhynchos
ENSSSCG00000023976	-	96	87.387	ENSANAG00000025391	DCP1B	87	77.747	Aotus_nancymaae
ENSSSCG00000023976	-	84	79.381	ENSACLG00000026164	dcp1b	94	42.572	Astatotilapia_calliptera
ENSSSCG00000023976	-	84	83.505	ENSAMXG00000007683	dcp1b	83	56.173	Astyanax_mexicanus
ENSSSCG00000023976	-	91	96.190	ENSBTAG00000030285	DCP1B	98	73.529	Bos_taurus
ENSSSCG00000023976	-	91	91.509	ENSCJAG00000039529	DCP1B	85	76.648	Callithrix_jacchus
ENSSSCG00000023976	-	91	92.453	ENSCAFG00000015993	DCP1B	98	65.189	Canis_familiaris
ENSSSCG00000023976	-	91	92.453	ENSCAFG00020012014	DCP1B	98	65.189	Canis_lupus_dingo
ENSSSCG00000023976	-	91	97.143	ENSCHIG00000014193	DCP1B	98	72.664	Capra_hircus
ENSSSCG00000023976	-	84	94.898	ENSTSYG00000008455	DCP1B	98	64.132	Carlito_syrichta
ENSSSCG00000023976	-	91	51.075	ENSCAPG00000012066	DCP1B	100	50.179	Cavia_aperea
ENSSSCG00000023976	-	91	90.566	ENSCPOG00000005279	DCP1B	59	73.259	Cavia_porcellus
ENSSSCG00000023976	-	96	88.288	ENSCCAG00000026870	DCP1B	60	96.739	Cebus_capucinus
ENSSSCG00000023976	-	96	88.288	ENSCATG00000031397	DCP1B	87	78.237	Cercocebus_atys
ENSSSCG00000023976	-	91	92.381	ENSCLAG00000009657	-	80	94.624	Chinchilla_lanigera
ENSSSCG00000023976	-	91	92.453	ENSCSAG00000011349	DCP1B	87	78.771	Chlorocebus_sabaeus
ENSSSCG00000023976	-	89	60.791	ENSCHOG00000003452	DCP1B	100	59.353	Choloepus_hoffmanni
ENSSSCG00000023976	-	84	93.814	ENSCPBG00000027442	DCP1B	98	58.581	Chrysemys_picta_bellii
ENSSSCG00000023976	-	96	88.288	ENSCANG00000036019	DCP1B	60	95.652	Colobus_angolensis_palliatus
ENSSSCG00000023976	-	91	90.566	ENSCGRG00001016549	Dcp1b	97	55.593	Cricetulus_griseus_chok1gshd
ENSSSCG00000023976	-	50	94.828	ENSCGRG00000013122	Dcp1b	99	53.286	Cricetulus_griseus_crigri
ENSSSCG00000023976	-	82	83.158	ENSCVAG00000015026	dcp1b	60	65.385	Cyprinodon_variegatus
ENSSSCG00000023976	-	92	71.963	ENSDARG00000045484	dcp1b	97	43.772	Danio_rerio
ENSSSCG00000023976	-	91	92.453	ENSDNOG00000003156	DCP1B	98	64.638	Dasypus_novemcinctus
ENSSSCG00000023976	-	90	92.308	ENSETEG00000005873	DCP1B	87	95.652	Echinops_telfairi
ENSSSCG00000023976	-	81	65.957	ENSEBUG00000007205	-	69	70.930	Eptatretus_burgeri
ENSSSCG00000023976	-	91	92.453	ENSEASG00005008434	DCP1B	51	77.591	Equus_asinus_asinus
ENSSSCG00000023976	-	91	92.453	ENSECAG00000018293	DCP1B	57	77.591	Equus_caballus
ENSSSCG00000023976	-	91	55.495	ENSEEUG00000007906	DCP1B	100	54.189	Erinaceus_europaeus
ENSSSCG00000023976	-	91	78.899	ENSELUG00000011344	dcp1b	60	52.478	Esox_lucius
ENSSSCG00000023976	-	91	92.453	ENSFCAG00000004819	DCP1B	98	68.317	Felis_catus
ENSSSCG00000023976	-	87	55.904	ENSFALG00000003240	DCP1B	100	54.797	Ficedula_albicollis
ENSSSCG00000023976	-	91	90.566	ENSFDAG00000018093	DCP1B	59	72.702	Fukomys_damarensis
ENSSSCG00000023976	-	91	77.570	ENSFHEG00000019846	dcp1b	80	49.573	Fundulus_heteroclitus
ENSSSCG00000023976	-	84	92.784	ENSGALG00000050288	DCP1B	98	57.426	Gallus_gallus
ENSSSCG00000023976	-	90	76.923	ENSGAFG00000016200	dcp1b	79	48.116	Gambusia_affinis
ENSSSCG00000023976	-	91	75.455	ENSGACG00000019692	dcp1b	74	55.238	Gasterosteus_aculeatus
ENSSSCG00000023976	-	92	89.908	ENSGAGG00000014114	DCP1B	57	67.967	Gopherus_agassizii
ENSSSCG00000023976	-	91	92.453	ENSGGOG00000010659	DCP1B	78	95.699	Gorilla_gorilla
ENSSSCG00000023976	-	84	78.351	ENSHBUG00000006101	dcp1b	72	51.429	Haplochromis_burtoni
ENSSSCG00000023976	-	91	90.566	ENSHGLG00000019233	DCP1B	59	75.209	Heterocephalus_glaber_female
ENSSSCG00000023976	-	91	90.566	ENSHGLG00100007645	DCP1B	59	75.209	Heterocephalus_glaber_male
ENSSSCG00000023976	-	79	85.870	ENSHCOG00000014509	dcp1b	96	41.593	Hippocampus_comes
ENSSSCG00000023976	-	91	92.453	ENSSTOG00000027287	DCP1B	98	63.622	Ictidomys_tridecemlineatus
ENSSSCG00000023976	-	91	92.381	ENSJJAG00000019553	-	75	95.652	Jaculus_jaculus
ENSSSCG00000023976	-	83	94.792	ENSJJAG00000020843	-	77	94.565	Jaculus_jaculus
ENSSSCG00000023976	-	91	80.189	ENSKMAG00000014961	dcp1b	64	85.106	Kryptolebias_marmoratus
ENSSSCG00000023976	-	90	76.923	ENSLBEG00000015902	-	75	83.696	Labrus_bergylta
ENSSSCG00000023976	-	84	90.722	ENSLACG00000017357	DCP1B	98	51.581	Latimeria_chalumnae
ENSSSCG00000023976	-	85	86.869	ENSLOCG00000016629	dcp1b	97	51.890	Lepisosteus_oculatus
ENSSSCG00000023976	-	99	85.217	ENSMFAG00000028687	DCP1B	87	78.237	Macaca_fascicularis
ENSSSCG00000023976	-	99	85.217	ENSMMUG00000010992	DCP1B	87	77.901	Macaca_mulatta
ENSSSCG00000023976	-	99	85.217	ENSMNEG00000045219	DCP1B	87	78.393	Macaca_nemestrina
ENSSSCG00000023976	-	96	88.288	ENSMLEG00000036414	DCP1B	98	65.902	Mandrillus_leucophaeus
ENSSSCG00000023976	-	91	77.064	ENSMAMG00000010519	dcp1b	50	81.967	Mastacembelus_armatus
ENSSSCG00000023976	-	84	79.381	ENSMZEG00005007893	dcp1b	94	42.572	Maylandia_zebra
ENSSSCG00000023976	-	84	92.784	ENSMGAG00000013437	DCP1B	86	61.983	Meleagris_gallopavo
ENSSSCG00000023976	-	91	87.736	ENSMAUG00000000763	Dcp1b	97	55.408	Mesocricetus_auratus
ENSSSCG00000023976	-	91	90.566	ENSMICG00000005702	DCP1B	98	65.482	Microcebus_murinus
ENSSSCG00000023976	-	91	88.679	ENSMOCG00000016799	Dcp1b	97	55.241	Microtus_ochrogaster
ENSSSCG00000023976	-	90	77.778	ENSMMOG00000002213	-	80	84.783	Mola_mola
ENSSSCG00000023976	-	91	92.453	ENSMODG00000018424	DCP1B	58	70.055	Monodelphis_domestica
ENSSSCG00000023976	-	90	79.808	ENSMALG00000014869	-	61	85.870	Monopterus_albus
ENSSSCG00000023976	-	84	91.837	MGP_CAROLIEiJ_G0028789	Dcp1b	97	55.987	Mus_caroli
ENSSSCG00000023976	-	84	91.837	ENSMUSG00000041477	Dcp1b	98	55.518	Mus_musculus
ENSSSCG00000023976	-	84	91.837	MGP_PahariEiJ_G0022544	Dcp1b	97	55.853	Mus_pahari
ENSSSCG00000023976	-	84	91.837	MGP_SPRETEiJ_G0029821	Dcp1b	97	55.426	Mus_spretus
ENSSSCG00000023976	-	91	91.509	ENSMPUG00000018069	DCP1B	57	77.716	Mustela_putorius_furo
ENSSSCG00000023976	-	91	63.684	ENSMLUG00000002252	DCP1B	56	75.232	Myotis_lucifugus
ENSSSCG00000023976	-	91	92.453	ENSNGAG00000022519	Dcp1b	97	59.664	Nannospalax_galili
ENSSSCG00000023976	-	84	79.381	ENSNBRG00000004185	dcp1b	88	81.522	Neolamprologus_brichardi
ENSSSCG00000023976	-	96	88.288	ENSNLEG00000002698	DCP1B	78	95.699	Nomascus_leucogenys
ENSSSCG00000023976	-	91	92.453	ENSMEUG00000003431	DCP1B	69	66.295	Notamacropus_eugenii
ENSSSCG00000023976	-	90	84.615	ENSODEG00000001245	-	67	88.043	Octodon_degus
ENSSSCG00000023976	-	90	91.346	ENSODEG00000013181	-	67	93.478	Octodon_degus
ENSSSCG00000023976	-	81	94.681	ENSOANG00000012232	-	94	79.851	Ornithorhynchus_anatinus
ENSSSCG00000023976	-	91	92.453	ENSOCUG00000011593	DCP1B	57	72.238	Oryctolagus_cuniculus
ENSSSCG00000023976	-	89	78.641	ENSORLG00000014000	dcp1b	61	60.082	Oryzias_latipes
ENSSSCG00000023976	-	89	78.641	ENSORLG00020016483	dcp1b	60	58.800	Oryzias_latipes_hni
ENSSSCG00000023976	-	89	80.583	ENSORLG00015015461	dcp1b	72	84.043	Oryzias_latipes_hsok
ENSSSCG00000023976	-	89	77.670	ENSOMEG00000009287	dcp1b	59	62.232	Oryzias_melastigma
ENSSSCG00000023976	-	91	92.453	ENSOGAG00000031515	DCP1B	98	65.546	Otolemur_garnettii
ENSSSCG00000023976	-	91	97.143	ENSOARG00000012960	DCP1B	98	71.701	Ovis_aries
ENSSSCG00000023976	-	91	92.453	ENSPPAG00000031510	DCP1B	79	94.681	Pan_paniscus
ENSSSCG00000023976	-	91	92.453	ENSPPRG00000023318	DCP1B	98	68.421	Panthera_pardus
ENSSSCG00000023976	-	91	92.453	ENSPTIG00000021851	DCP1B	98	68.144	Panthera_tigris_altaica
ENSSSCG00000023976	-	91	92.453	ENSPTRG00000004525	DCP1B	79	94.681	Pan_troglodytes
ENSSSCG00000023976	-	96	88.288	ENSPANG00000008311	DCP1B	87	76.423	Papio_anubis
ENSSSCG00000023976	-	92	76.577	ENSPKIG00000000520	dcp1b	97	48.415	Paramormyrops_kingsleyae
ENSSSCG00000023976	-	84	91.837	ENSPSIG00000009160	DCP1B	57	66.667	Pelodiscus_sinensis
ENSSSCG00000023976	-	84	83.505	ENSPMGG00000004607	-	82	82.796	Periophthalmus_magnuspinnatus
ENSSSCG00000023976	-	91	89.623	ENSPEMG00000019470	Dcp1b	97	55.833	Peromyscus_maniculatus_bairdii
ENSSSCG00000023976	-	82	74.737	ENSPMAG00000005651	-	81	72.650	Petromyzon_marinus
ENSSSCG00000023976	-	91	92.453	ENSPCIG00000019743	DCP1B	84	69.210	Phascolarctos_cinereus
ENSSSCG00000023976	-	90	78.846	ENSPLAG00000005883	dcp1b	56	66.667	Poecilia_latipinna
ENSSSCG00000023976	-	90	78.846	ENSPMEG00000001391	dcp1b	57	66.667	Poecilia_mexicana
ENSSSCG00000023976	-	90	78.846	ENSPREG00000004280	dcp1b	57	67.839	Poecilia_reticulata
ENSSSCG00000023976	-	87	65.129	ENSPPYG00000004145	DCP1B	100	63.838	Pongo_abelii
ENSSSCG00000023976	-	91	90.164	ENSPCOG00000026128	DCP1B	97	93.878	Propithecus_coquereli
ENSSSCG00000023976	-	91	90.566	ENSPVAG00000001978	DCP1B	98	66.227	Pteropus_vampyrus
ENSSSCG00000023976	-	84	79.381	ENSPNYG00000020418	dcp1b	74	48.256	Pundamilia_nyererei
ENSSSCG00000023976	-	84	91.837	ENSRNOG00000007340	Dcp1b	97	55.686	Rattus_norvegicus
ENSSSCG00000023976	-	96	88.288	ENSRBIG00000032794	DCP1B	88	77.437	Rhinopithecus_bieti
ENSSSCG00000023976	-	96	88.288	ENSRROG00000041000	DCP1B	60	95.652	Rhinopithecus_roxellana
ENSSSCG00000023976	-	96	87.387	ENSSBOG00000033086	DCP1B	60	95.652	Saimiri_boliviensis_boliviensis
ENSSSCG00000023976	-	89	60.326	ENSSHAG00000012569	DCP1B	99	58.065	Sarcophilus_harrisii
ENSSSCG00000023976	-	92	76.577	ENSSFOG00015023556	dcp1b	55	57.006	Scleropages_formosus
ENSSSCG00000023976	-	90	78.505	ENSSMAG00000000547	dcp1b	59	55.351	Scophthalmus_maximus
ENSSSCG00000023976	-	90	79.808	ENSSDUG00000004916	dcp1b	51	82.787	Seriola_dumerili
ENSSSCG00000023976	-	90	78.846	ENSSLDG00000008782	dcp1b	79	84.783	Seriola_lalandi_dorsalis
ENSSSCG00000023976	-	80	94.624	ENSSPUG00000009607	-	73	95.556	Sphenodon_punctatus
ENSSSCG00000023976	-	91	76.364	ENSSPAG00000008731	-	81	84.783	Stegastes_partitus
ENSSSCG00000023976	-	84	90.816	ENSTGUG00000012575	DCP1B	58	69.274	Taeniopygia_guttata
ENSSSCG00000023976	-	84	81.633	ENSTRUG00000016408	dcp1b	58	61.404	Takifugu_rubripes
ENSSSCG00000023976	-	84	81.443	ENSTNIG00000007579	dcp1b	98	40.594	Tetraodon_nigroviridis
ENSSSCG00000023976	-	92	94.393	ENSTTRG00000003017	-	51	86.603	Tursiops_truncatus
ENSSSCG00000023976	-	92	82.243	ENSUAMG00000017535	-	75	83.158	Ursus_americanus
ENSSSCG00000023976	-	87	65.568	ENSUMAG00000011668	DCP1B	100	64.835	Ursus_maritimus
ENSSSCG00000023976	-	82	94.737	ENSVVUG00000020529	DCP1B	98	60.586	Vulpes_vulpes
ENSSSCG00000023976	-	88	85.294	ENSVVUG00000019477	-	76	88.172	Vulpes_vulpes
ENSSSCG00000023976	-	91	83.962	ENSXETG00000000899	dcp1b	95	54.545	Xenopus_tropicalis
ENSSSCG00000023976	-	97	73.214	ENSXCOG00000013593	-	87	77.778	Xiphophorus_couchianus
ENSSSCG00000023976	-	90	78.846	ENSXMAG00000011153	dcp1b	57	68.342	Xiphophorus_maculatus