EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000024385 (Gene tree)
Gene ID: 100625239
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 141130 bases
Position: chr11:16829673-16970802
Accession: 100625239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000054238	RNase_H2-Ydr279	PF09468.10	6.3e-16	1	1
ENSSSCP00000051003	RNase_H2-Ydr279	PF09468.10	7.3e-16	1	1
ENSSSCP00000022257	RNase_H2-Ydr279	PF09468.10	1.2e-15	1	1
ENSSSCP00000032108	RNase_H2-Ydr279	PF09468.10	1.4e-15	1	1
ENSSSCP00000059263	RNase_H2-Ydr279	PF09468.10	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000047378	RNASEH2B-202	1762	XM_021065140	ENSSSCP00000051003	277 (aa)	XP_020920799	A0A287B3F7
ENSSSCT00000060320	RNASEH2B-204	982	-	ENSSSCP00000032108	279 (aa)	-	A0A287BSY5
ENSSSCT00000023518	RNASEH2B-203	1670	XM_021065139	ENSSSCP00000022257	255 (aa)	XP_020920798	I3LDX2
ENSSSCT00000054063	RNASEH2B-205	1086	XM_021065141	ENSSSCP00000059263	279 (aa)	XP_020920800	A0A287BSY5
ENSSSCT00000059543	RNASEH2B-201	1814	XM_021065143	ENSSSCP00000054238	250 (aa)	XP_020920802	A0A287BDP0

Gene Model

Click here to download ENSSSCG00000024385's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000024385	RNASEH2B	100	88.530	ENSG00000136104	RNASEH2B	100	91.011	Homo_sapiens
ENSSSCG00000024385	RNASEH2B	96	54.656	ENSAPOG00000010496	rnaseh2b	87	52.416	Acanthochromis_polyacanthus
ENSSSCG00000024385	RNASEH2B	100	87.589	ENSAMEG00000012040	RNASEH2B	95	87.589	Ailuropoda_melanoleuca
ENSSSCG00000024385	RNASEH2B	96	48.770	ENSACIG00000021991	rnaseh2b	98	47.264	Amphilophus_citrinellus
ENSSSCG00000024385	RNASEH2B	96	53.846	ENSAOCG00000013398	rnaseh2b	87	51.673	Amphiprion_ocellaris
ENSSSCG00000024385	RNASEH2B	96	53.846	ENSAPEG00000006033	rnaseh2b	87	51.673	Amphiprion_percula
ENSSSCG00000024385	RNASEH2B	97	55.200	ENSATEG00000008370	rnaseh2b	87	53.903	Anabas_testudineus
ENSSSCG00000024385	RNASEH2B	91	65.385	ENSAPLG00000008955	RNASEH2B	98	63.670	Anas_platyrhynchos
ENSSSCG00000024385	RNASEH2B	95	61.134	ENSACAG00000011679	RNASEH2B	91	58.759	Anolis_carolinensis
ENSSSCG00000024385	RNASEH2B	100	86.738	ENSANAG00000020662	RNASEH2B	98	84.800	Aotus_nancymaae
ENSSSCG00000024385	RNASEH2B	95	52.846	ENSACLG00000000467	rnaseh2b	87	50.370	Astatotilapia_calliptera
ENSSSCG00000024385	RNASEH2B	96	52.869	ENSAMXG00000014351	rnaseh2b	87	52.256	Astyanax_mexicanus
ENSSSCG00000024385	RNASEH2B	99	87.050	ENSBTAG00000020149	RNASEH2B	98	84.588	Bos_taurus
ENSSSCG00000024385	RNASEH2B	96	82.917	ENSCJAG00000003822	-	90	82.716	Callithrix_jacchus
ENSSSCG00000024385	RNASEH2B	97	87.868	ENSCJAG00000008585	-	98	84.190	Callithrix_jacchus
ENSSSCG00000024385	RNASEH2B	100	83.513	ENSCAFG00000004295	RNASEH2B	90	82.609	Canis_familiaris
ENSSSCG00000024385	RNASEH2B	100	83.513	ENSCAFG00020000250	RNASEH2B	91	83.513	Canis_lupus_dingo
ENSSSCG00000024385	RNASEH2B	99	89.091	ENSCHIG00000018220	RNASEH2B	98	86.232	Capra_hircus
ENSSSCG00000024385	RNASEH2B	93	76.471	ENSCHIG00000012982	-	84	76.471	Capra_hircus
ENSSSCG00000024385	RNASEH2B	100	86.275	ENSTSYG00000009176	-	91	86.022	Carlito_syrichta
ENSSSCG00000024385	RNASEH2B	97	72.325	ENSTSYG00000031177	-	89	72.694	Carlito_syrichta
ENSSSCG00000024385	RNASEH2B	100	76.157	ENSCAPG00000009978	RNASEH2B	95	76.596	Cavia_aperea
ENSSSCG00000024385	RNASEH2B	100	83.214	ENSCPOG00000032527	RNASEH2B	97	85.366	Cavia_porcellus
ENSSSCG00000024385	RNASEH2B	99	87.050	ENSCCAG00000026979	RNASEH2B	98	84.190	Cebus_capucinus
ENSSSCG00000024385	RNASEH2B	98	85.199	ENSCATG00000031336	RNASEH2B	75	88.593	Cercocebus_atys
ENSSSCG00000024385	RNASEH2B	100	85.098	ENSCLAG00000003517	RNASEH2B	76	84.532	Chinchilla_lanigera
ENSSSCG00000024385	RNASEH2B	97	86.545	ENSCSAG00000017701	RNASEH2B	84	86.545	Chlorocebus_sabaeus
ENSSSCG00000024385	RNASEH2B	99	70.144	ENSCHOG00000013688	RNASEH2B	90	70.144	Choloepus_hoffmanni
ENSSSCG00000024385	RNASEH2B	95	61.885	ENSCPBG00000008684	RNASEH2B	87	59.751	Chrysemys_picta_bellii
ENSSSCG00000024385	RNASEH2B	99	37.329	ENSCING00000016454	-	93	36.364	Ciona_intestinalis
ENSSSCG00000024385	RNASEH2B	100	86.170	ENSCANG00000041511	-	98	84.190	Colobus_angolensis_palliatus
ENSSSCG00000024385	RNASEH2B	100	84.706	ENSCGRG00001000611	Rnaseh2b	91	83.871	Cricetulus_griseus_chok1gshd
ENSSSCG00000024385	RNASEH2B	100	84.706	ENSCGRG00000006077	Rnaseh2b	91	83.871	Cricetulus_griseus_crigri
ENSSSCG00000024385	RNASEH2B	95	54.472	ENSCSEG00000004910	rnaseh2b	86	54.472	Cynoglossus_semilaevis
ENSSSCG00000024385	RNASEH2B	95	51.220	ENSCVAG00000005212	rnaseh2b	87	50.373	Cyprinodon_variegatus
ENSSSCG00000024385	RNASEH2B	95	54.286	ENSDARG00000005128	rnaseh2b	87	52.985	Danio_rerio
ENSSSCG00000024385	RNASEH2B	100	74.910	ENSDNOG00000049666	-	91	74.910	Dasypus_novemcinctus
ENSSSCG00000024385	RNASEH2B	99	76.000	ENSDNOG00000034290	-	90	76.000	Dasypus_novemcinctus
ENSSSCG00000024385	RNASEH2B	100	84.229	ENSDORG00000010708	Rnaseh2b	90	84.229	Dipodomys_ordii
ENSSSCG00000024385	RNASEH2B	95	39.184	ENSEBUG00000005965	rnaseh2b	98	39.535	Eptatretus_burgeri
ENSSSCG00000024385	RNASEH2B	100	88.889	ENSEASG00005017323	RNASEH2B	90	88.889	Equus_asinus_asinus
ENSSSCG00000024385	RNASEH2B	100	89.247	ENSECAG00000014262	RNASEH2B	98	88.043	Equus_caballus
ENSSSCG00000024385	RNASEH2B	95	52.033	ENSELUG00000019560	rnaseh2b	86	50.373	Esox_lucius
ENSSSCG00000024385	RNASEH2B	98	85.199	ENSFCAG00000014257	RNASEH2B	87	85.199	Felis_catus
ENSSSCG00000024385	RNASEH2B	95	61.885	ENSFALG00000008435	RNASEH2B	91	60.674	Ficedula_albicollis
ENSSSCG00000024385	RNASEH2B	100	83.871	ENSFDAG00000009920	RNASEH2B	97	83.871	Fukomys_damarensis
ENSSSCG00000024385	RNASEH2B	95	53.659	ENSFHEG00000012160	rnaseh2b	87	51.866	Fundulus_heteroclitus
ENSSSCG00000024385	RNASEH2B	96	49.801	ENSGMOG00000016830	rnaseh2b	90	48.855	Gadus_morhua
ENSSSCG00000024385	RNASEH2B	99	55.823	ENSGALG00000017015	RNASEH2B	98	55.823	Gallus_gallus
ENSSSCG00000024385	RNASEH2B	95	53.279	ENSGAFG00000021222	rnaseh2b	87	51.880	Gambusia_affinis
ENSSSCG00000024385	RNASEH2B	96	52.569	ENSGACG00000002821	rnaseh2b	87	50.545	Gasterosteus_aculeatus
ENSSSCG00000024385	RNASEH2B	95	62.295	ENSGAGG00000014722	RNASEH2B	97	60.741	Gopherus_agassizii
ENSSSCG00000024385	RNASEH2B	100	86.879	ENSGGOG00000001044	RNASEH2B	98	85.375	Gorilla_gorilla
ENSSSCG00000024385	RNASEH2B	95	53.252	ENSHBUG00000006049	rnaseh2b	89	51.163	Haplochromis_burtoni
ENSSSCG00000024385	RNASEH2B	100	86.380	ENSHGLG00100015953	RNASEH2B	95	86.380	Heterocephalus_glaber_male
ENSSSCG00000024385	RNASEH2B	96	51.639	ENSHCOG00000003318	rnaseh2b	86	51.639	Hippocampus_comes
ENSSSCG00000024385	RNASEH2B	97	53.600	ENSIPUG00000023815	rnaseh2b	88	52.206	Ictalurus_punctatus
ENSSSCG00000024385	RNASEH2B	100	83.922	ENSSTOG00000015126	RNASEH2B	95	84.892	Ictidomys_tridecemlineatus
ENSSSCG00000024385	RNASEH2B	99	83.094	ENSJJAG00000013335	Rnaseh2b	94	83.094	Jaculus_jaculus
ENSSSCG00000024385	RNASEH2B	95	54.472	ENSKMAG00000002198	rnaseh2b	87	52.612	Kryptolebias_marmoratus
ENSSSCG00000024385	RNASEH2B	96	55.870	ENSLBEG00000019331	rnaseh2b	87	53.903	Labrus_bergylta
ENSSSCG00000024385	RNASEH2B	82	60.190	ENSLACG00000010782	RNASEH2B	91	60.088	Latimeria_chalumnae
ENSSSCG00000024385	RNASEH2B	95	56.735	ENSLOCG00000009296	rnaseh2b	87	55.597	Lepisosteus_oculatus
ENSSSCG00000024385	RNASEH2B	99	82.609	ENSLAFG00000030158	RNASEH2B	89	82.609	Loxodonta_africana
ENSSSCG00000024385	RNASEH2B	100	86.738	ENSMFAG00000038464	-	90	86.738	Macaca_fascicularis
ENSSSCG00000024385	RNASEH2B	100	86.000	ENSMMUG00000021746	RNASEH2B	98	86.000	Macaca_mulatta
ENSSSCG00000024385	RNASEH2B	100	86.738	ENSMNEG00000030580	RNASEH2B	90	86.738	Macaca_nemestrina
ENSSSCG00000024385	RNASEH2B	100	85.816	ENSMLEG00000043911	-	98	84.980	Mandrillus_leucophaeus
ENSSSCG00000024385	RNASEH2B	96	54.656	ENSMAMG00000017109	rnaseh2b	87	52.416	Mastacembelus_armatus
ENSSSCG00000024385	RNASEH2B	95	52.846	ENSMZEG00005021926	rnaseh2b	87	50.000	Maylandia_zebra
ENSSSCG00000024385	RNASEH2B	93	60.920	ENSMGAG00000015025	RNASEH2B	94	61.255	Meleagris_gallopavo
ENSSSCG00000024385	RNASEH2B	100	83.922	ENSMAUG00000016520	Rnaseh2b	90	82.734	Mesocricetus_auratus
ENSSSCG00000024385	RNASEH2B	100	87.455	ENSMICG00000000528	RNASEH2B	95	86.667	Microcebus_murinus
ENSSSCG00000024385	RNASEH2B	96	54.656	ENSMMOG00000019799	rnaseh2b	93	52.788	Mola_mola
ENSSSCG00000024385	RNASEH2B	95	68.443	ENSMODG00000010775	RNASEH2B	88	66.914	Monodelphis_domestica
ENSSSCG00000024385	RNASEH2B	96	53.846	ENSMALG00000004463	rnaseh2b	87	51.673	Monopterus_albus
ENSSSCG00000024385	RNASEH2B	90	83.043	MGP_CAROLIEiJ_G0019389	Rnaseh2b	97	74.812	Mus_caroli
ENSSSCG00000024385	RNASEH2B	100	84.706	ENSMUSG00000021932	Rnaseh2b	90	83.094	Mus_musculus
ENSSSCG00000024385	RNASEH2B	100	64.527	MGP_PahariEiJ_G0030407	-	65	84.667	Mus_pahari
ENSSSCG00000024385	RNASEH2B	93	87.124	ENSMPUG00000018010	RNASEH2B	98	87.124	Mustela_putorius_furo
ENSSSCG00000024385	RNASEH2B	99	88.489	ENSMLUG00000004065	-	90	88.489	Myotis_lucifugus
ENSSSCG00000024385	RNASEH2B	95	52.846	ENSNBRG00000003253	rnaseh2b	89	49.815	Neolamprologus_brichardi
ENSSSCG00000024385	RNASEH2B	100	86.879	ENSNLEG00000003804	RNASEH2B	98	85.375	Nomascus_leucogenys
ENSSSCG00000024385	RNASEH2B	97	65.568	ENSMEUG00000003665	RNASEH2B	94	65.568	Notamacropus_eugenii
ENSSSCG00000024385	RNASEH2B	61	84.615	ENSOPRG00000003695	-	77	63.265	Ochotona_princeps
ENSSSCG00000024385	RNASEH2B	100	83.529	ENSODEG00000006793	-	91	83.513	Octodon_degus
ENSSSCG00000024385	RNASEH2B	84	79.535	ENSODEG00000005412	-	97	75.410	Octodon_degus
ENSSSCG00000024385	RNASEH2B	95	51.220	ENSONIG00000006657	rnaseh2b	87	49.630	Oreochromis_niloticus
ENSSSCG00000024385	RNASEH2B	95	67.339	ENSOANG00000015537	RNASEH2B	96	64.982	Ornithorhynchus_anatinus
ENSSSCG00000024385	RNASEH2B	99	85.818	ENSOCUG00000008904	RNASEH2B	87	85.818	Oryctolagus_cuniculus
ENSSSCG00000024385	RNASEH2B	95	56.557	ENSORLG00000011850	rnaseh2b	88	53.731	Oryzias_latipes
ENSSSCG00000024385	RNASEH2B	95	56.735	ENSORLG00020012081	rnaseh2b	88	54.104	Oryzias_latipes_hni
ENSSSCG00000024385	RNASEH2B	95	56.735	ENSORLG00015015468	rnaseh2b	88	54.104	Oryzias_latipes_hsok
ENSSSCG00000024385	RNASEH2B	95	53.878	ENSOMEG00000012441	rnaseh2b	88	51.685	Oryzias_melastigma
ENSSSCG00000024385	RNASEH2B	100	84.043	ENSOGAG00000016486	RNASEH2B	95	84.043	Otolemur_garnettii
ENSSSCG00000024385	RNASEH2B	99	88.364	ENSOARG00000008701	RNASEH2B	93	88.364	Ovis_aries
ENSSSCG00000024385	RNASEH2B	99	86.477	ENSPPAG00000026374	RNASEH2B	100	86.344	Pan_paniscus
ENSSSCG00000024385	RNASEH2B	99	86.786	ENSPPRG00000012450	RNASEH2B	92	86.786	Panthera_pardus
ENSSSCG00000024385	RNASEH2B	99	87.143	ENSPTIG00000013918	RNASEH2B	100	87.143	Panthera_tigris_altaica
ENSSSCG00000024385	RNASEH2B	99	88.129	ENSPTRG00000005886	RNASEH2B	98	88.129	Pan_troglodytes
ENSSSCG00000024385	RNASEH2B	100	85.816	ENSPANG00000022424	-	98	84.921	Papio_anubis
ENSSSCG00000024385	RNASEH2B	95	52.245	ENSPKIG00000013386	rnaseh2b	87	50.373	Paramormyrops_kingsleyae
ENSSSCG00000024385	RNASEH2B	74	54.301	ENSPSIG00000002224	RNASEH2B	89	52.356	Pelodiscus_sinensis
ENSSSCG00000024385	RNASEH2B	79	53.431	ENSPMGG00000010299	rnaseh2b	98	52.451	Periophthalmus_magnuspinnatus
ENSSSCG00000024385	RNASEH2B	100	84.706	ENSPEMG00000019721	Rnaseh2b	91	83.871	Peromyscus_maniculatus_bairdii
ENSSSCG00000024385	RNASEH2B	93	62.548	ENSPCIG00000014535	-	88	62.548	Phascolarctos_cinereus
ENSSSCG00000024385	RNASEH2B	95	53.629	ENSPFOG00000016722	rnaseh2b	87	52.593	Poecilia_formosa
ENSSSCG00000024385	RNASEH2B	95	54.065	ENSPLAG00000011755	rnaseh2b	87	52.985	Poecilia_latipinna
ENSSSCG00000024385	RNASEH2B	95	54.065	ENSPMEG00000002721	rnaseh2b	87	52.985	Poecilia_mexicana
ENSSSCG00000024385	RNASEH2B	95	54.065	ENSPREG00000007737	rnaseh2b	87	52.985	Poecilia_reticulata
ENSSSCG00000024385	RNASEH2B	100	86.879	ENSPPYG00000005378	RNASEH2B	90	86.170	Pongo_abelii
ENSSSCG00000024385	RNASEH2B	100	88.929	ENSPCOG00000026623	RNASEH2B	98	86.056	Propithecus_coquereli
ENSSSCG00000024385	RNASEH2B	90	85.771	ENSPVAG00000000508	RNASEH2B	98	83.019	Pteropus_vampyrus
ENSSSCG00000024385	RNASEH2B	95	53.252	ENSPNYG00000013552	rnaseh2b	89	51.163	Pundamilia_nyererei
ENSSSCG00000024385	RNASEH2B	96	50.813	ENSPNAG00000024825	rnaseh2b	87	50.373	Pygocentrus_nattereri
ENSSSCG00000024385	RNASEH2B	99	83.465	ENSRNOG00000009192	Rnaseh2b	90	82.374	Rattus_norvegicus
ENSSSCG00000024385	RNASEH2B	100	87.455	ENSRBIG00000028928	-	98	85.600	Rhinopithecus_bieti
ENSSSCG00000024385	RNASEH2B	96	77.239	ENSRBIG00000036017	-	94	74.009	Rhinopithecus_bieti
ENSSSCG00000024385	RNASEH2B	100	87.455	ENSRROG00000018808	-	98	84.585	Rhinopithecus_roxellana
ENSSSCG00000024385	RNASEH2B	94	71.064	ENSRROG00000044915	-	90	70.293	Rhinopithecus_roxellana
ENSSSCG00000024385	RNASEH2B	100	86.380	ENSSBOG00000008081	RNASEH2B	100	86.380	Saimiri_boliviensis_boliviensis
ENSSSCG00000024385	RNASEH2B	98	67.331	ENSSHAG00000016190	RNASEH2B	90	65.468	Sarcophilus_harrisii
ENSSSCG00000024385	RNASEH2B	95	53.659	ENSSFOG00015010190	rnaseh2b	87	52.045	Scleropages_formosus
ENSSSCG00000024385	RNASEH2B	96	54.656	ENSSMAG00000001546	rnaseh2b	87	52.416	Scophthalmus_maximus
ENSSSCG00000024385	RNASEH2B	95	55.691	ENSSDUG00000007567	rnaseh2b	87	53.358	Seriola_dumerili
ENSSSCG00000024385	RNASEH2B	95	56.098	ENSSLDG00000012485	rnaseh2b	89	52.222	Seriola_lalandi_dorsalis
ENSSSCG00000024385	RNASEH2B	95	60.000	ENSSPUG00000006745	-	94	59.231	Sphenodon_punctatus
ENSSSCG00000024385	RNASEH2B	96	55.061	ENSSPAG00000020926	rnaseh2b	87	52.788	Stegastes_partitus
ENSSSCG00000024385	RNASEH2B	95	61.885	ENSTGUG00000012104	RNASEH2B	98	60.674	Taeniopygia_guttata
ENSSSCG00000024385	RNASEH2B	96	56.048	ENSTRUG00000015098	rnaseh2b	87	54.074	Takifugu_rubripes
ENSSSCG00000024385	RNASEH2B	96	55.242	ENSTNIG00000013861	rnaseh2b	87	53.333	Tetraodon_nigroviridis
ENSSSCG00000024385	RNASEH2B	100	83.688	ENSTTRG00000010761	RNASEH2B	92	83.688	Tursiops_truncatus
ENSSSCG00000024385	RNASEH2B	100	89.964	ENSUAMG00000022849	RNASEH2B	100	89.964	Ursus_americanus
ENSSSCG00000024385	RNASEH2B	100	88.627	ENSUMAG00000018556	RNASEH2B	100	88.530	Ursus_maritimus
ENSSSCG00000024385	RNASEH2B	100	91.786	ENSVPAG00000005679	RNASEH2B	97	91.786	Vicugna_pacos
ENSSSCG00000024385	RNASEH2B	99	83.636	ENSVVUG00000024015	RNASEH2B	82	83.636	Vulpes_vulpes
ENSSSCG00000024385	RNASEH2B	95	60.000	ENSXETG00000020720	rnaseh2b	89	56.777	Xenopus_tropicalis
ENSSSCG00000024385	RNASEH2B	95	53.689	ENSXCOG00000018732	rnaseh2b	88	50.958	Xiphophorus_couchianus
ENSSSCG00000024385	RNASEH2B	95	53.689	ENSXMAG00000022554	rnaseh2b	87	52.256	Xiphophorus_maculatus