EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000024748 (Gene tree)
Gene ID: 100512402
Gene Symbol: THUMPD1
Alias: FLJ20274|Tan1
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 9381 bases
Position: chr3:25285967-25295347
Accession: 100512402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024904	THUMP	PF02926.17	6.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000024527	THUMPD1-201	3627	XM_005662087	ENSSSCP00000024904	359 (aa)	XP_005662144	I3LLD6

Gene Model

Click here to download ENSSSCG00000024748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000024748	THUMPD1	100	87.744	ENSG00000066654	THUMPD1	100	87.744	Homo_sapiens
ENSSSCG00000024748	THUMPD1	83	54.019	ENSAPOG00000008440	thumpd1	96	54.019	Acanthochromis_polyacanthus
ENSSSCG00000024748	THUMPD1	100	89.136	ENSAMEG00000006257	THUMPD1	99	89.136	Ailuropoda_melanoleuca
ENSSSCG00000024748	THUMPD1	72	59.144	ENSACIG00000024395	thumpd1	92	53.268	Amphilophus_citrinellus
ENSSSCG00000024748	THUMPD1	71	59.766	ENSAOCG00000003509	thumpd1	79	59.766	Amphiprion_ocellaris
ENSSSCG00000024748	THUMPD1	83	53.226	ENSAPEG00000010515	thumpd1	96	53.226	Amphiprion_percula
ENSSSCG00000024748	THUMPD1	88	52.997	ENSATEG00000004737	thumpd1	95	54.072	Anabas_testudineus
ENSSSCG00000024748	THUMPD1	71	78.906	ENSAPLG00000015259	THUMPD1	90	80.078	Anas_platyrhynchos
ENSSSCG00000024748	THUMPD1	81	65.101	ENSACAG00000009625	-	93	67.114	Anolis_carolinensis
ENSSSCG00000024748	THUMPD1	100	71.866	ENSANAG00000027040	-	100	71.866	Aotus_nancymaae
ENSSSCG00000024748	THUMPD1	100	86.908	ENSANAG00000026882	-	100	86.908	Aotus_nancymaae
ENSSSCG00000024748	THUMPD1	99	70.506	ENSANAG00000027311	-	100	70.506	Aotus_nancymaae
ENSSSCG00000024748	THUMPD1	72	58.755	ENSACLG00000004830	thumpd1	79	58.984	Astatotilapia_calliptera
ENSSSCG00000024748	THUMPD1	91	54.354	ENSAMXG00000012356	thumpd1	98	54.354	Astyanax_mexicanus
ENSSSCG00000024748	THUMPD1	99	91.620	ENSBTAG00000047673	THUMPD1	100	91.620	Bos_taurus
ENSSSCG00000024748	THUMPD1	96	86.667	ENSCJAG00000009499	THUMPD1	100	86.630	Callithrix_jacchus
ENSSSCG00000024748	THUMPD1	100	89.694	ENSCAFG00000017985	THUMPD1	99	89.694	Canis_familiaris
ENSSSCG00000024748	THUMPD1	100	89.694	ENSCAFG00020021861	THUMPD1	99	89.694	Canis_lupus_dingo
ENSSSCG00000024748	THUMPD1	99	90.503	ENSCHIG00000010134	THUMPD1	99	90.503	Capra_hircus
ENSSSCG00000024748	THUMPD1	100	87.187	ENSTSYG00000011537	THUMPD1	100	87.187	Carlito_syrichta
ENSSSCG00000024748	THUMPD1	96	82.370	ENSCPOG00000023684	-	100	82.500	Cavia_porcellus
ENSSSCG00000024748	THUMPD1	96	82.370	ENSCPOG00000008919	-	100	82.500	Cavia_porcellus
ENSSSCG00000024748	THUMPD1	100	86.351	ENSCCAG00000030205	THUMPD1	100	86.351	Cebus_capucinus
ENSSSCG00000024748	THUMPD1	100	79.666	ENSCCAG00000019379	-	86	79.666	Cebus_capucinus
ENSSSCG00000024748	THUMPD1	99	72.452	ENSCATG00000020844	-	99	72.452	Cercocebus_atys
ENSSSCG00000024748	THUMPD1	100	87.187	ENSCATG00000040309	THUMPD1	100	87.187	Cercocebus_atys
ENSSSCG00000024748	THUMPD1	100	83.844	ENSCLAG00000016508	THUMPD1	100	83.844	Chinchilla_lanigera
ENSSSCG00000024748	THUMPD1	99	87.151	ENSCSAG00000007610	THUMPD1	99	87.151	Chlorocebus_sabaeus
ENSSSCG00000024748	THUMPD1	100	69.697	ENSCSAG00000009860	-	80	69.697	Chlorocebus_sabaeus
ENSSSCG00000024748	THUMPD1	100	86.908	ENSCHOG00000005587	THUMPD1	100	86.908	Choloepus_hoffmanni
ENSSSCG00000024748	THUMPD1	79	77.622	ENSCPBG00000019055	THUMPD1	83	76.712	Chrysemys_picta_bellii
ENSSSCG00000024748	THUMPD1	75	30.420	ENSCING00000021274	-	100	30.420	Ciona_intestinalis
ENSSSCG00000024748	THUMPD1	87	76.752	ENSCANG00000035822	-	100	76.752	Colobus_angolensis_palliatus
ENSSSCG00000024748	THUMPD1	87	79.808	ENSCANG00000038770	THUMPD1	100	79.808	Colobus_angolensis_palliatus
ENSSSCG00000024748	THUMPD1	100	85.515	ENSCGRG00001014829	Thumpd1	100	85.515	Cricetulus_griseus_chok1gshd
ENSSSCG00000024748	THUMPD1	100	85.515	ENSCGRG00000000060	Thumpd1	100	85.515	Cricetulus_griseus_crigri
ENSSSCG00000024748	THUMPD1	79	55.556	ENSCSEG00000002041	thumpd1	91	56.250	Cynoglossus_semilaevis
ENSSSCG00000024748	THUMPD1	78	58.947	ENSCVAG00000014960	thumpd1	92	57.143	Cyprinodon_variegatus
ENSSSCG00000024748	THUMPD1	87	50.462	ENSDARG00000100264	thumpd1	87	51.974	Danio_rerio
ENSSSCG00000024748	THUMPD1	100	88.579	ENSDNOG00000043510	THUMPD1	100	88.579	Dasypus_novemcinctus
ENSSSCG00000024748	THUMPD1	100	80.992	ENSDORG00000028216	Thumpd1	100	80.992	Dipodomys_ordii
ENSSSCG00000024748	THUMPD1	85	32.812	FBgn0035532	CG15014	93	33.028	Drosophila_melanogaster
ENSSSCG00000024748	THUMPD1	100	77.008	ENSETEG00000002763	THUMPD1	84	77.285	Echinops_telfairi
ENSSSCG00000024748	THUMPD1	76	43.299	ENSEBUG00000011011	THUMPD1	76	43.299	Eptatretus_burgeri
ENSSSCG00000024748	THUMPD1	55	85.787	ENSEASG00005017428	-	100	85.787	Equus_asinus_asinus
ENSSSCG00000024748	THUMPD1	100	88.301	ENSECAG00000005354	THUMPD1	100	88.301	Equus_caballus
ENSSSCG00000024748	THUMPD1	100	84.341	ENSEEUG00000011256	THUMPD1	88	84.615	Erinaceus_europaeus
ENSSSCG00000024748	THUMPD1	73	61.686	ENSELUG00000013612	thumpd1	61	61.686	Esox_lucius
ENSSSCG00000024748	THUMPD1	100	91.643	ENSFCAG00000039296	THUMPD1	100	91.643	Felis_catus
ENSSSCG00000024748	THUMPD1	66	78.992	ENSFALG00000014029	THUMPD1	96	74.254	Ficedula_albicollis
ENSSSCG00000024748	THUMPD1	72	57.915	ENSFHEG00000013319	thumpd1	82	55.749	Fundulus_heteroclitus
ENSSSCG00000024748	THUMPD1	77	58.123	ENSGMOG00000003369	thumpd1	87	58.123	Gadus_morhua
ENSSSCG00000024748	THUMPD1	77	57.295	ENSGAFG00000011000	thumpd1	87	57.500	Gambusia_affinis
ENSSSCG00000024748	THUMPD1	71	61.328	ENSGACG00000019511	thumpd1	78	61.328	Gasterosteus_aculeatus
ENSSSCG00000024748	THUMPD1	89	70.186	ENSGAGG00000008225	THUMPD1	99	70.186	Gopherus_agassizii
ENSSSCG00000024748	THUMPD1	100	87.465	ENSGGOG00000005231	-	80	87.465	Gorilla_gorilla
ENSSSCG00000024748	THUMPD1	96	64.348	ENSGGOG00000043232	-	100	64.903	Gorilla_gorilla
ENSSSCG00000024748	THUMPD1	72	58.366	ENSHBUG00000017996	thumpd1	79	58.594	Haplochromis_burtoni
ENSSSCG00000024748	THUMPD1	100	84.444	ENSHGLG00000011001	-	100	84.444	Heterocephalus_glaber_female
ENSSSCG00000024748	THUMPD1	60	71.429	ENSHGLG00000000952	-	99	71.429	Heterocephalus_glaber_female
ENSSSCG00000024748	THUMPD1	100	85.000	ENSHGLG00100016023	THUMPD1	100	85.000	Heterocephalus_glaber_male
ENSSSCG00000024748	THUMPD1	60	71.429	ENSHGLG00100010577	-	99	71.429	Heterocephalus_glaber_male
ENSSSCG00000024748	THUMPD1	68	55.918	ENSHCOG00000008618	thumpd1	56	55.918	Hippocampus_comes
ENSSSCG00000024748	THUMPD1	65	60.515	ENSIPUG00000012500	thumpd1	61	57.252	Ictalurus_punctatus
ENSSSCG00000024748	THUMPD1	100	86.908	ENSSTOG00000007011	THUMPD1	100	86.908	Ictidomys_tridecemlineatus
ENSSSCG00000024748	THUMPD1	100	82.173	ENSJJAG00000004295	-	100	82.173	Jaculus_jaculus
ENSSSCG00000024748	THUMPD1	77	50.355	ENSKMAG00000009545	thumpd1	84	45.559	Kryptolebias_marmoratus
ENSSSCG00000024748	THUMPD1	68	62.698	ENSLBEG00000009349	thumpd1	94	54.605	Labrus_bergylta
ENSSSCG00000024748	THUMPD1	78	64.309	ENSLACG00000005833	THUMPD1	85	64.952	Latimeria_chalumnae
ENSSSCG00000024748	THUMPD1	76	60.806	ENSLOCG00000000854	thumpd1	87	61.172	Lepisosteus_oculatus
ENSSSCG00000024748	THUMPD1	100	86.630	ENSLAFG00000025838	THUMPD1	100	86.630	Loxodonta_africana
ENSSSCG00000024748	THUMPD1	100	87.187	ENSMFAG00000036996	THUMPD1	100	87.187	Macaca_fascicularis
ENSSSCG00000024748	THUMPD1	87	73.186	ENSMFAG00000041474	-	100	73.186	Macaca_fascicularis
ENSSSCG00000024748	THUMPD1	100	87.187	ENSMMUG00000004225	THUMPD1	100	87.187	Macaca_mulatta
ENSSSCG00000024748	THUMPD1	87	72.871	ENSMMUG00000038414	-	100	72.871	Macaca_mulatta
ENSSSCG00000024748	THUMPD1	87	72.871	ENSMNEG00000038856	-	100	72.871	Macaca_nemestrina
ENSSSCG00000024748	THUMPD1	100	87.187	ENSMNEG00000020726	THUMPD1	100	87.187	Macaca_nemestrina
ENSSSCG00000024748	THUMPD1	100	86.908	ENSMLEG00000036436	THUMPD1	100	86.908	Mandrillus_leucophaeus
ENSSSCG00000024748	THUMPD1	87	73.016	ENSMLEG00000030012	-	99	73.016	Mandrillus_leucophaeus
ENSSSCG00000024748	THUMPD1	75	60.448	ENSMAMG00000006858	thumpd1	98	53.211	Mastacembelus_armatus
ENSSSCG00000024748	THUMPD1	72	58.366	ENSMZEG00005013693	thumpd1	79	58.594	Maylandia_zebra
ENSSSCG00000024748	THUMPD1	57	79.803	ENSMGAG00000010340	THUMPD1	99	79.803	Meleagris_gallopavo
ENSSSCG00000024748	THUMPD1	100	84.680	ENSMAUG00000013306	Thumpd1	100	84.680	Mesocricetus_auratus
ENSSSCG00000024748	THUMPD1	99	70.141	ENSMICG00000030865	-	96	70.538	Microcebus_murinus
ENSSSCG00000024748	THUMPD1	100	90.251	ENSMICG00000038483	-	100	90.251	Microcebus_murinus
ENSSSCG00000024748	THUMPD1	100	85.237	ENSMOCG00000003447	Thumpd1	100	85.237	Microtus_ochrogaster
ENSSSCG00000024748	THUMPD1	72	59.770	ENSMMOG00000011323	thumpd1	76	59.770	Mola_mola
ENSSSCG00000024748	THUMPD1	97	76.685	ENSMODG00000024776	-	97	77.247	Monodelphis_domestica
ENSSSCG00000024748	THUMPD1	97	77.528	ENSMODG00000006971	-	96	77.528	Monodelphis_domestica
ENSSSCG00000024748	THUMPD1	91	51.385	ENSMALG00000019522	thumpd1	98	52.308	Monopterus_albus
ENSSSCG00000024748	THUMPD1	100	82.730	MGP_CAROLIEiJ_G0030382	Thumpd1	100	82.730	Mus_caroli
ENSSSCG00000024748	THUMPD1	100	83.287	ENSMUSG00000030942	Thumpd1	100	83.287	Mus_musculus
ENSSSCG00000024748	THUMPD1	100	82.778	MGP_PahariEiJ_G0013593	Thumpd1	100	82.778	Mus_pahari
ENSSSCG00000024748	THUMPD1	90	87.888	ENSMLUG00000010547	THUMPD1	99	81.586	Myotis_lucifugus
ENSSSCG00000024748	THUMPD1	99	85.196	ENSNGAG00000018643	Thumpd1	100	85.196	Nannospalax_galili
ENSSSCG00000024748	THUMPD1	72	57.471	ENSNBRG00000006987	thumpd1	74	58.462	Neolamprologus_brichardi
ENSSSCG00000024748	THUMPD1	100	86.908	ENSNLEG00000012369	THUMPD1	100	86.908	Nomascus_leucogenys
ENSSSCG00000024748	THUMPD1	83	88.312	ENSOPRG00000011342	THUMPD1	72	88.312	Ochotona_princeps
ENSSSCG00000024748	THUMPD1	100	84.722	ENSODEG00000012360	THUMPD1	100	84.722	Octodon_degus
ENSSSCG00000024748	THUMPD1	72	58.366	ENSONIG00000000146	thumpd1	89	58.366	Oreochromis_niloticus
ENSSSCG00000024748	THUMPD1	99	67.123	ENSOANG00000014297	THUMPD1	100	67.123	Ornithorhynchus_anatinus
ENSSSCG00000024748	THUMPD1	97	88.286	ENSOCUG00000009895	-	97	88.286	Oryctolagus_cuniculus
ENSSSCG00000024748	THUMPD1	62	80.804	ENSOCUG00000025354	-	100	80.804	Oryctolagus_cuniculus
ENSSSCG00000024748	THUMPD1	66	62.712	ENSORLG00000027557	thumpd1	76	62.712	Oryzias_latipes
ENSSSCG00000024748	THUMPD1	66	63.559	ENSORLG00020010206	thumpd1	75	63.559	Oryzias_latipes_hni
ENSSSCG00000024748	THUMPD1	66	63.559	ENSORLG00015009581	thumpd1	75	63.559	Oryzias_latipes_hsok
ENSSSCG00000024748	THUMPD1	72	59.615	ENSOMEG00000019361	thumpd1	78	59.615	Oryzias_melastigma
ENSSSCG00000024748	THUMPD1	99	87.640	ENSOGAG00000026723	THUMPD1	99	87.640	Otolemur_garnettii
ENSSSCG00000024748	THUMPD1	99	90.782	ENSOARG00000013107	THUMPD1	99	90.782	Ovis_aries
ENSSSCG00000024748	THUMPD1	96	68.696	ENSPPAG00000001653	-	96	74.603	Pan_paniscus
ENSSSCG00000024748	THUMPD1	100	87.187	ENSPPAG00000033818	-	80	87.187	Pan_paniscus
ENSSSCG00000024748	THUMPD1	100	92.201	ENSPPRG00000014118	-	100	92.201	Panthera_pardus
ENSSSCG00000024748	THUMPD1	100	91.365	ENSPTIG00000013856	-	100	91.365	Panthera_tigris_altaica
ENSSSCG00000024748	THUMPD1	100	86.908	ENSPTRG00000007848	THUMPD1	80	86.908	Pan_troglodytes
ENSSSCG00000024748	THUMPD1	96	67.536	ENSPTRG00000046073	-	100	67.967	Pan_troglodytes
ENSSSCG00000024748	THUMPD1	87	72.785	ENSPANG00000034881	-	99	72.785	Papio_anubis
ENSSSCG00000024748	THUMPD1	100	86.908	ENSPANG00000025507	THUMPD1	100	86.908	Papio_anubis
ENSSSCG00000024748	THUMPD1	74	61.993	ENSPKIG00000014491	thumpd1	83	62.731	Paramormyrops_kingsleyae
ENSSSCG00000024748	THUMPD1	78	76.071	ENSPSIG00000012430	THUMPD1	96	76.071	Pelodiscus_sinensis
ENSSSCG00000024748	THUMPD1	72	61.686	ENSPMGG00000014479	thumpd1	90	61.686	Periophthalmus_magnuspinnatus
ENSSSCG00000024748	THUMPD1	67	65.690	ENSPEMG00000002608	-	100	66.109	Peromyscus_maniculatus_bairdii
ENSSSCG00000024748	THUMPD1	61	52.055	ENSPMAG00000001389	thumpd1	85	57.778	Petromyzon_marinus
ENSSSCG00000024748	THUMPD1	99	75.890	ENSPCIG00000029241	THUMPD1	72	75.890	Phascolarctos_cinereus
ENSSSCG00000024748	THUMPD1	84	55.263	ENSPFOG00000012649	thumpd1	94	55.263	Poecilia_formosa
ENSSSCG00000024748	THUMPD1	83	54.967	ENSPLAG00000000137	thumpd1	94	54.967	Poecilia_latipinna
ENSSSCG00000024748	THUMPD1	84	55.446	ENSPMEG00000007750	thumpd1	94	55.446	Poecilia_mexicana
ENSSSCG00000024748	THUMPD1	76	58.484	ENSPREG00000000144	thumpd1	93	58.484	Poecilia_reticulata
ENSSSCG00000024748	THUMPD1	79	85.461	ENSPPYG00000007160	-	100	85.461	Pongo_abelii
ENSSSCG00000024748	THUMPD1	79	82.686	ENSPCAG00000001534	THUMPD1	100	82.686	Procavia_capensis
ENSSSCG00000024748	THUMPD1	100	89.972	ENSPCOG00000024663	THUMPD1	100	89.972	Propithecus_coquereli
ENSSSCG00000024748	THUMPD1	100	81.163	ENSPVAG00000005659	-	100	81.163	Pteropus_vampyrus
ENSSSCG00000024748	THUMPD1	62	75.446	ENSPVAG00000003286	-	99	75.446	Pteropus_vampyrus
ENSSSCG00000024748	THUMPD1	72	58.366	ENSPNYG00000007061	thumpd1	78	58.594	Pundamilia_nyererei
ENSSSCG00000024748	THUMPD1	76	61.397	ENSPNAG00000024872	thumpd1	88	61.397	Pygocentrus_nattereri
ENSSSCG00000024748	THUMPD1	62	80.357	ENSRNOG00000014946	AABR07005588.1	100	80.357	Rattus_norvegicus
ENSSSCG00000024748	THUMPD1	100	87.187	ENSRBIG00000040752	THUMPD1	100	87.187	Rhinopithecus_bieti
ENSSSCG00000024748	THUMPD1	87	76.752	ENSRBIG00000040136	-	100	76.752	Rhinopithecus_bieti
ENSSSCG00000024748	THUMPD1	100	86.908	ENSRROG00000042189	THUMPD1	100	86.908	Rhinopithecus_roxellana
ENSSSCG00000024748	THUMPD1	87	76.433	ENSRROG00000045699	-	100	76.433	Rhinopithecus_roxellana
ENSSSCG00000024748	THUMPD1	100	86.351	ENSSBOG00000034246	THUMPD1	100	86.351	Saimiri_boliviensis_boliviensis
ENSSSCG00000024748	THUMPD1	99	75.275	ENSSHAG00000003853	THUMPD1	99	75.275	Sarcophilus_harrisii
ENSSSCG00000024748	THUMPD1	77	52.518	ENSSFOG00015007512	thumpd1	83	52.518	Scleropages_formosus
ENSSSCG00000024748	THUMPD1	71	60.156	ENSSMAG00000000723	thumpd1	77	60.156	Scophthalmus_maximus
ENSSSCG00000024748	THUMPD1	87	53.185	ENSSDUG00000014502	thumpd1	97	52.866	Seriola_dumerili
ENSSSCG00000024748	THUMPD1	87	53.185	ENSSLDG00000007694	thumpd1	97	53.185	Seriola_lalandi_dorsalis
ENSSSCG00000024748	THUMPD1	81	74.411	ENSSPUG00000005096	THUMPD1	89	74.411	Sphenodon_punctatus
ENSSSCG00000024748	THUMPD1	83	54.693	ENSSPAG00000006993	thumpd1	97	54.516	Stegastes_partitus
ENSSSCG00000024748	THUMPD1	72	77.011	ENSTGUG00000009247	THUMPD1	95	78.161	Taeniopygia_guttata
ENSSSCG00000024748	THUMPD1	81	55.921	ENSTRUG00000015656	thumpd1	94	55.921	Takifugu_rubripes
ENSSSCG00000024748	THUMPD1	81	56.997	ENSTNIG00000001584	thumpd1	96	56.997	Tetraodon_nigroviridis
ENSSSCG00000024748	THUMPD1	100	87.465	ENSTBEG00000005252	THUMPD1	88	87.465	Tupaia_belangeri
ENSSSCG00000024748	THUMPD1	100	92.479	ENSTTRG00000016435	THUMPD1	100	92.479	Tursiops_truncatus
ENSSSCG00000024748	THUMPD1	62	77.232	ENSUAMG00000005779	-	100	77.232	Ursus_americanus
ENSSSCG00000024748	THUMPD1	100	89.972	ENSVPAG00000003422	THUMPD1	100	89.972	Vicugna_pacos
ENSSSCG00000024748	THUMPD1	100	90.251	ENSVVUG00000023241	THUMPD1	99	90.251	Vulpes_vulpes
ENSSSCG00000024748	THUMPD1	78	59.643	ENSXETG00000005539	thumpd1	95	59.643	Xenopus_tropicalis
ENSSSCG00000024748	THUMPD1	77	57.914	ENSXMAG00000026052	thumpd1	96	54.045	Xiphophorus_maculatus