EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000024789 (Gene tree)
Gene ID: 100620890
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 7538 bases
Position: chr3:8723552-8731089
Accession: 100620890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000023704	ARS2	PF04959.13	1.8e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000024767	SRRT-201	2445	XM_003354479	ENSSSCP00000023704	814 (aa)	XP_003354527	I3LI05

Gene Model

Click here to download ENSSSCG00000024789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000024789	SRRT	100	95.526	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSSSCG00000024789	SRRT	54	74.944	ENSAPOG00000002304	srrt	52	71.302	Acanthochromis_polyacanthus
ENSSSCG00000024789	SRRT	99	91.320	ENSAMEG00000014506	SRRT	94	92.235	Ailuropoda_melanoleuca
ENSSSCG00000024789	SRRT	81	74.718	ENSACIG00000015795	srrt	81	74.718	Amphilophus_citrinellus
ENSSSCG00000024789	SRRT	98	53.735	ENSAOCG00000009189	-	50	65.333	Amphiprion_ocellaris
ENSSSCG00000024789	SRRT	86	75.169	ENSAOCG00000009693	srrt	80	75.169	Amphiprion_ocellaris
ENSSSCG00000024789	SRRT	98	54.182	ENSAPEG00000020016	-	50	65.333	Amphiprion_percula
ENSSSCG00000024789	SRRT	86	74.718	ENSAPEG00000003646	srrt	81	74.718	Amphiprion_percula
ENSSSCG00000024789	SRRT	86	72.235	ENSATEG00000014425	srrt	79	73.138	Anabas_testudineus
ENSSSCG00000024789	SRRT	58	60.041	ENSATEG00000003652	-	81	63.816	Anabas_testudineus
ENSSSCG00000024789	SRRT	99	74.244	ENSACAG00000001014	SRRT	95	75.000	Anolis_carolinensis
ENSSSCG00000024789	SRRT	100	94.585	ENSANAG00000031718	SRRT	95	94.585	Aotus_nancymaae
ENSSSCG00000024789	SRRT	99	93.674	ENSBTAG00000001134	SRRT	95	93.742	Bos_taurus
ENSSSCG00000024789	SRRT	56	47.656	WBGene00017085	E01A2.2	77	47.500	Caenorhabditis_elegans
ENSSSCG00000024789	SRRT	99	94.039	ENSCJAG00000014917	SRRT	95	94.103	Callithrix_jacchus
ENSSSCG00000024789	SRRT	99	94.647	ENSCAFG00000023538	SRRT	95	94.705	Canis_familiaris
ENSSSCG00000024789	SRRT	99	97.174	ENSCAFG00020013358	SRRT	99	97.174	Canis_lupus_dingo
ENSSSCG00000024789	SRRT	99	94.377	ENSCHIG00000010495	SRRT	95	94.438	Capra_hircus
ENSSSCG00000024789	SRRT	99	91.443	ENSTSYG00000036426	SRRT	99	91.536	Carlito_syrichta
ENSSSCG00000024789	SRRT	99	92.910	ENSCAPG00000013586	SRRT	99	92.987	Cavia_aperea
ENSSSCG00000024789	SRRT	99	94.289	ENSCPOG00000001739	SRRT	95	94.351	Cavia_porcellus
ENSSSCG00000024789	SRRT	99	94.526	ENSCCAG00000015877	SRRT	95	94.585	Cebus_capucinus
ENSSSCG00000024789	SRRT	100	94.921	ENSCATG00000036306	SRRT	97	93.445	Cercocebus_atys
ENSSSCG00000024789	SRRT	99	94.404	ENSCLAG00000007568	SRRT	95	94.465	Chinchilla_lanigera
ENSSSCG00000024789	SRRT	99	94.526	ENSCSAG00000017996	SRRT	95	94.585	Chlorocebus_sabaeus
ENSSSCG00000024789	SRRT	56	95.294	ENSCHOG00000007815	SRRT	67	95.294	Choloepus_hoffmanni
ENSSSCG00000024789	SRRT	78	81.200	ENSCPBG00000011553	SRRT	82	81.853	Chrysemys_picta_bellii
ENSSSCG00000024789	SRRT	98	41.114	ENSCING00000003506	-	52	51.844	Ciona_intestinalis
ENSSSCG00000024789	SRRT	98	38.889	ENSCSAVG00000008394	-	76	55.183	Ciona_savignyi
ENSSSCG00000024789	SRRT	100	95.042	ENSCANG00000034556	SRRT	95	95.042	Colobus_angolensis_palliatus
ENSSSCG00000024789	SRRT	99	92.476	ENSCGRG00001001594	Srrt	95	92.557	Cricetulus_griseus_chok1gshd
ENSSSCG00000024789	SRRT	99	84.625	ENSCGRG00000007292	Srrt	100	89.126	Cricetulus_griseus_crigri
ENSSSCG00000024789	SRRT	99	62.546	ENSCVAG00000019848	srrt	95	62.833	Cyprinodon_variegatus
ENSSSCG00000024789	SRRT	99	94.282	ENSDNOG00000003851	SRRT	95	94.344	Dasypus_novemcinctus
ENSSSCG00000024789	SRRT	99	91.636	ENSDORG00000005584	Srrt	95	91.966	Dipodomys_ordii
ENSSSCG00000024789	SRRT	80	52.489	FBgn0033062	Ars2	66	52.915	Drosophila_melanogaster
ENSSSCG00000024789	SRRT	84	90.780	ENSETEG00000016175	SRRT	81	92.667	Echinops_telfairi
ENSSSCG00000024789	SRRT	63	62.500	ENSEBUG00000008517	-	72	65.278	Eptatretus_burgeri
ENSSSCG00000024789	SRRT	100	95.066	ENSEASG00005016956	SRRT	95	95.066	Equus_asinus_asinus
ENSSSCG00000024789	SRRT	100	94.946	ENSECAG00000012292	SRRT	95	94.946	Equus_caballus
ENSSSCG00000024789	SRRT	84	98.851	ENSEEUG00000009117	SRRT	88	94.512	Erinaceus_europaeus
ENSSSCG00000024789	SRRT	98	53.491	ENSELUG00000021216	-	51	63.478	Esox_lucius
ENSSSCG00000024789	SRRT	54	74.603	ENSELUG00000006651	srrt	80	74.664	Esox_lucius
ENSSSCG00000024789	SRRT	99	94.891	ENSFCAG00000006855	SRRT	95	94.946	Felis_catus
ENSSSCG00000024789	SRRT	60	53.947	ENSFALG00000007524	-	75	70.238	Ficedula_albicollis
ENSSSCG00000024789	SRRT	99	90.678	ENSFDAG00000021347	SRRT	95	90.678	Fukomys_damarensis
ENSSSCG00000024789	SRRT	50	59.472	ENSFHEG00000004105	-	82	59.472	Fundulus_heteroclitus
ENSSSCG00000024789	SRRT	77	74.699	ENSFHEG00000002756	srrt	88	74.699	Fundulus_heteroclitus
ENSSSCG00000024789	SRRT	98	52.534	ENSGAFG00000020383	-	51	61.124	Gambusia_affinis
ENSSSCG00000024789	SRRT	98	51.140	ENSGACG00000001100	-	50	62.667	Gasterosteus_aculeatus
ENSSSCG00000024789	SRRT	100	95.526	ENSGGOG00000001508	SRRT	95	95.526	Gorilla_gorilla
ENSSSCG00000024789	SRRT	99	93.811	ENSHGLG00000008344	Srrt	95	93.758	Heterocephalus_glaber_female
ENSSSCG00000024789	SRRT	100	94.800	ENSHGLG00100018857	Srrt	95	94.800	Heterocephalus_glaber_male
ENSSSCG00000024789	SRRT	99	60.494	ENSHCOG00000005403	srrt	53	70.362	Hippocampus_comes
ENSSSCG00000024789	SRRT	98	52.190	ENSHCOG00000008904	-	52	61.731	Hippocampus_comes
ENSSSCG00000024789	SRRT	100	95.042	ENSSTOG00000013776	SRRT	95	95.042	Ictidomys_tridecemlineatus
ENSSSCG00000024789	SRRT	99	92.421	ENSJJAG00000010446	Srrt	100	89.648	Jaculus_jaculus
ENSSSCG00000024789	SRRT	98	53.230	ENSKMAG00000008468	-	51	62.069	Kryptolebias_marmoratus
ENSSSCG00000024789	SRRT	99	62.255	ENSKMAG00000013599	srrt	52	73.363	Kryptolebias_marmoratus
ENSSSCG00000024789	SRRT	99	63.113	ENSLBEG00000016308	srrt	52	75.506	Labrus_bergylta
ENSSSCG00000024789	SRRT	99	65.884	ENSLACG00000001089	SRRT	95	66.104	Latimeria_chalumnae
ENSSSCG00000024789	SRRT	71	82.099	ENSLOCG00000013658	srrt	53	64.151	Lepisosteus_oculatus
ENSSSCG00000024789	SRRT	99	91.849	ENSLAFG00000007725	SRRT	95	93.983	Loxodonta_africana
ENSSSCG00000024789	SRRT	100	95.163	ENSMFAG00000033745	SRRT	99	93.683	Macaca_fascicularis
ENSSSCG00000024789	SRRT	99	94.526	ENSMMUG00000021255	SRRT	95	94.585	Macaca_mulatta
ENSSSCG00000024789	SRRT	99	94.526	ENSMNEG00000041864	SRRT	97	93.683	Macaca_nemestrina
ENSSSCG00000024789	SRRT	100	95.163	ENSMLEG00000029479	SRRT	98	93.683	Mandrillus_leucophaeus
ENSSSCG00000024789	SRRT	98	52.927	ENSMAMG00000010681	-	50	64.967	Mastacembelus_armatus
ENSSSCG00000024789	SRRT	99	93.066	ENSMAUG00000011386	Srrt	100	88.190	Mesocricetus_auratus
ENSSSCG00000024789	SRRT	99	94.526	ENSMICG00000009471	SRRT	97	93.683	Microcebus_murinus
ENSSSCG00000024789	SRRT	99	92.457	ENSMOCG00000001971	Srrt	100	88.571	Microtus_ochrogaster
ENSSSCG00000024789	SRRT	100	64.087	ENSMMOG00000016399	srrt	51	73.094	Mola_mola
ENSSSCG00000024789	SRRT	92	54.204	ENSMMOG00000011137	-	52	65.324	Mola_mola
ENSSSCG00000024789	SRRT	54	87.500	ENSMODG00000004862	SRRT	84	88.889	Monodelphis_domestica
ENSSSCG00000024789	SRRT	61	48.290	ENSMALG00000005567	-	76	54.878	Monopterus_albus
ENSSSCG00000024789	SRRT	95	59.632	ENSMALG00000018604	srrt	51	69.683	Monopterus_albus
ENSSSCG00000024789	SRRT	99	92.822	MGP_CAROLIEiJ_G0027870	Srrt	100	99.627	Mus_caroli
ENSSSCG00000024789	SRRT	99	92.822	ENSMUSG00000037364	Srrt	99	99.627	Mus_musculus
ENSSSCG00000024789	SRRT	99	92.579	MGP_PahariEiJ_G0024456	Srrt	100	99.254	Mus_pahari
ENSSSCG00000024789	SRRT	99	92.822	MGP_SPRETEiJ_G0028875	Srrt	100	99.627	Mus_spretus
ENSSSCG00000024789	SRRT	99	94.769	ENSMPUG00000015839	SRRT	95	94.826	Mustela_putorius_furo
ENSSSCG00000024789	SRRT	99	94.404	ENSMLUG00000009975	SRRT	95	94.465	Myotis_lucifugus
ENSSSCG00000024789	SRRT	99	92.822	ENSNGAG00000023715	Srrt	100	91.896	Nannospalax_galili
ENSSSCG00000024789	SRRT	54	72.172	ENSNBRG00000019100	srrt	50	72.172	Neolamprologus_brichardi
ENSSSCG00000024789	SRRT	100	86.732	ENSNLEG00000011987	SRRT	100	86.732	Nomascus_leucogenys
ENSSSCG00000024789	SRRT	99	73.366	ENSMEUG00000011941	SRRT	94	72.881	Notamacropus_eugenii
ENSSSCG00000024789	SRRT	67	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSSSCG00000024789	SRRT	99	93.521	ENSODEG00000016856	SRRT	95	93.591	Octodon_degus
ENSSSCG00000024789	SRRT	54	73.815	ENSONIG00000004242	srrt	50	73.589	Oreochromis_niloticus
ENSSSCG00000024789	SRRT	98	55.487	ENSOMEG00000006963	-	51	64.143	Oryzias_melastigma
ENSSSCG00000024789	SRRT	99	63.366	ENSOMEG00000003155	srrt	81	73.661	Oryzias_melastigma
ENSSSCG00000024789	SRRT	100	94.946	ENSOGAG00000017242	SRRT	95	94.946	Otolemur_garnettii
ENSSSCG00000024789	SRRT	99	94.377	ENSOARG00000015645	SRRT	95	94.438	Ovis_aries
ENSSSCG00000024789	SRRT	100	95.405	ENSPPAG00000041090	SRRT	95	95.405	Pan_paniscus
ENSSSCG00000024789	SRRT	99	94.866	ENSPPRG00000009557	SRRT	95	94.921	Panthera_pardus
ENSSSCG00000024789	SRRT	99	94.769	ENSPTIG00000014355	SRRT	95	94.826	Panthera_tigris_altaica
ENSSSCG00000024789	SRRT	100	95.405	ENSPTRG00000019511	SRRT	100	92.849	Pan_troglodytes
ENSSSCG00000024789	SRRT	99	93.614	ENSPANG00000020763	SRRT	96	93.683	Papio_anubis
ENSSSCG00000024789	SRRT	99	65.306	ENSPKIG00000022212	-	50	75.395	Paramormyrops_kingsleyae
ENSSSCG00000024789	SRRT	100	67.391	ENSPKIG00000005434	srrt	76	78.281	Paramormyrops_kingsleyae
ENSSSCG00000024789	SRRT	99	76.179	ENSPSIG00000016311	SRRT	95	78.204	Pelodiscus_sinensis
ENSSSCG00000024789	SRRT	98	63.171	ENSPMGG00000002841	srrt	53	73.363	Periophthalmus_magnuspinnatus
ENSSSCG00000024789	SRRT	99	92.298	ENSPEMG00000010834	Srrt	95	92.261	Peromyscus_maniculatus_bairdii
ENSSSCG00000024789	SRRT	99	88.527	ENSPCIG00000000816	SRRT	95	88.756	Phascolarctos_cinereus
ENSSSCG00000024789	SRRT	98	51.425	ENSPFOG00000016554	-	51	61.400	Poecilia_formosa
ENSSSCG00000024789	SRRT	98	51.241	ENSPLAG00000004526	-	51	61.036	Poecilia_latipinna
ENSSSCG00000024789	SRRT	80	73.198	ENSPMEG00000001182	srrt	81	73.198	Poecilia_mexicana
ENSSSCG00000024789	SRRT	99	83.820	ENSPPYG00000017432	SRRT	94	83.995	Pongo_abelii
ENSSSCG00000024789	SRRT	99	90.000	ENSPCAG00000001621	SRRT	95	90.107	Procavia_capensis
ENSSSCG00000024789	SRRT	100	94.826	ENSPCOG00000025751	SRRT	95	94.826	Propithecus_coquereli
ENSSSCG00000024789	SRRT	81	83.824	ENSPVAG00000000834	SRRT	100	83.824	Pteropus_vampyrus
ENSSSCG00000024789	SRRT	54	73.363	ENSPNYG00000018710	srrt	50	73.363	Pundamilia_nyererei
ENSSSCG00000024789	SRRT	91	70.732	ENSPNAG00000010629	srrt	94	53.286	Pygocentrus_nattereri
ENSSSCG00000024789	SRRT	50	88.564	ENSRNOG00000048277	AABR07035787.1	82	88.564	Rattus_norvegicus
ENSSSCG00000024789	SRRT	99	94.526	ENSRBIG00000035718	SRRT	97	93.683	Rhinopithecus_bieti
ENSSSCG00000024789	SRRT	99	94.526	ENSRROG00000030622	SRRT	97	93.683	Rhinopithecus_roxellana
ENSSSCG00000024789	SRRT	100	95.163	ENSSBOG00000033570	SRRT	96	95.163	Saimiri_boliviensis_boliviensis
ENSSSCG00000024789	SRRT	75	84.252	ENSSHAG00000007349	-	100	84.252	Sarcophilus_harrisii
ENSSSCG00000024789	SRRT	53	61.712	ENSSMAG00000018195	-	81	61.369	Scophthalmus_maximus
ENSSSCG00000024789	SRRT	99	61.859	ENSSMAG00000015342	srrt	52	73.529	Scophthalmus_maximus
ENSSSCG00000024789	SRRT	54	73.589	ENSSDUG00000012049	srrt	51	74.492	Seriola_dumerili
ENSSSCG00000024789	SRRT	86	73.363	ENSSLDG00000017477	srrt	78	74.266	Seriola_lalandi_dorsalis
ENSSSCG00000024789	SRRT	89	50.781	ENSSPAG00000018943	-	81	61.832	Stegastes_partitus
ENSSSCG00000024789	SRRT	54	71.461	ENSTRUG00000016075	srrt	50	71.302	Takifugu_rubripes
ENSSSCG00000024789	SRRT	98	50.182	ENSTNIG00000003111	-	51	60.573	Tetraodon_nigroviridis
ENSSSCG00000024789	SRRT	78	59.174	ENSTNIG00000011779	srrt	69	70.806	Tetraodon_nigroviridis
ENSSSCG00000024789	SRRT	60	96.154	ENSTBEG00000005212	SRRT	56	95.044	Tupaia_belangeri
ENSSSCG00000024789	SRRT	99	94.769	ENSTTRG00000011104	SRRT	95	94.826	Tursiops_truncatus
ENSSSCG00000024789	SRRT	100	95.187	ENSUAMG00000027997	SRRT	98	95.187	Ursus_americanus
ENSSSCG00000024789	SRRT	100	95.187	ENSUMAG00000011295	SRRT	95	95.187	Ursus_maritimus
ENSSSCG00000024789	SRRT	99	94.647	ENSVVUG00000023572	SRRT	95	94.705	Vulpes_vulpes
ENSSSCG00000024789	SRRT	71	79.861	ENSXETG00000025124	srrt	80	74.720	Xenopus_tropicalis
ENSSSCG00000024789	SRRT	81	74.041	ENSXMAG00000007627	srrt	54	74.041	Xiphophorus_maculatus
ENSSSCG00000024789	SRRT	98	52.104	ENSXMAG00000002090	-	51	61.678	Xiphophorus_maculatus