EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000024867 (Gene tree)
Gene ID: 448855
Gene Symbol: ISG20
Alias: CD25|HEM45
Full Name: Sus scrofa interferon stimulated exonuclease gene 20 (ISG20)%2C mRNA.
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 11974 bases
Position: chr1:191183504-191195477
Accession: NM_001005351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000021223	RNase_T	PF00929.24	4.8e-10	1	1
ENSSSCP00000031324	RNase_T	PF00929.24	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059007	ISG20-201	754	-	ENSSSCP00000031324	171 (aa)	-	I3LB04
ENSSSCT00000024643	ISG20-202	752	XM_005660030	ENSSSCP00000021223	171 (aa)	XP_005660087	I3LB04

Gene Model

Click here to download ENSSSCG00000024867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000024867	ISG20	99	80.473	ENSG00000172183	ISG20	93	80.473	Homo_sapiens
ENSSSCG00000024867	ISG20	99	77.515	ENSAMEG00000012803	ISG20	99	77.515	Ailuropoda_melanoleuca
ENSSSCG00000024867	ISG20	96	47.059	ENSACIG00000012040	isg20	75	44.715	Amphilophus_citrinellus
ENSSSCG00000024867	ISG20	92	38.922	ENSACAG00000013905	-	61	37.356	Anolis_carolinensis
ENSSSCG00000024867	ISG20	100	90.643	ENSBTAG00000014762	ISG20	100	90.643	Bos_taurus
ENSSSCG00000024867	ISG20	99	76.923	ENSCJAG00000034923	ISG20	93	76.923	Callithrix_jacchus
ENSSSCG00000024867	ISG20	99	83.432	ENSCAFG00000011525	ISG20	99	83.432	Canis_familiaris
ENSSSCG00000024867	ISG20	99	83.432	ENSCAFG00020018837	ISG20	99	83.432	Canis_lupus_dingo
ENSSSCG00000024867	ISG20	100	89.474	ENSCHIG00000014526	ISG20	100	89.474	Capra_hircus
ENSSSCG00000024867	ISG20	100	75.439	ENSTSYG00000030528	ISG20	94	75.439	Carlito_syrichta
ENSSSCG00000024867	ISG20	99	73.964	ENSCAPG00000011672	ISG20	93	73.964	Cavia_aperea
ENSSSCG00000024867	ISG20	99	73.373	ENSCPOG00000036489	ISG20	93	73.373	Cavia_porcellus
ENSSSCG00000024867	ISG20	99	76.331	ENSCCAG00000025395	ISG20	93	76.331	Cebus_capucinus
ENSSSCG00000024867	ISG20	99	78.698	ENSCATG00000042494	ISG20	93	78.698	Cercocebus_atys
ENSSSCG00000024867	ISG20	99	72.189	ENSCLAG00000008100	ISG20	93	72.189	Chinchilla_lanigera
ENSSSCG00000024867	ISG20	99	78.107	ENSCSAG00000017194	ISG20	93	78.107	Chlorocebus_sabaeus
ENSSSCG00000024867	ISG20	92	38.272	ENSCING00000004431	-	81	35.625	Ciona_intestinalis
ENSSSCG00000024867	ISG20	99	79.290	ENSCANG00000032616	ISG20	93	79.290	Colobus_angolensis_palliatus
ENSSSCG00000024867	ISG20	99	73.964	ENSCGRG00001016300	-	92	73.964	Cricetulus_griseus_chok1gshd
ENSSSCG00000024867	ISG20	99	73.964	ENSCGRG00000000609	-	92	73.964	Cricetulus_griseus_crigri
ENSSSCG00000024867	ISG20	95	50.307	ENSCVAG00000009300	isg20	77	50.307	Cyprinodon_variegatus
ENSSSCG00000024867	ISG20	98	46.429	ENSDARG00000102266	isg20l2	52	46.429	Danio_rerio
ENSSSCG00000024867	ISG20	99	76.923	ENSDNOG00000049229	ISG20	93	76.923	Dasypus_novemcinctus
ENSSSCG00000024867	ISG20	92	48.101	ENSEBUG00000010461	ISG20	56	48.101	Eptatretus_burgeri
ENSSSCG00000024867	ISG20	92	47.468	ENSEBUG00000009658	-	77	47.468	Eptatretus_burgeri
ENSSSCG00000024867	ISG20	99	75.882	ENSEASG00005015360	ISG20	99	75.882	Equus_asinus_asinus
ENSSSCG00000024867	ISG20	99	76.471	ENSECAG00000019499	ISG20	99	76.471	Equus_caballus
ENSSSCG00000024867	ISG20	99	78.698	ENSFCAG00000005151	ISG20	99	78.698	Felis_catus
ENSSSCG00000024867	ISG20	99	75.148	ENSFDAG00000007444	ISG20	93	75.148	Fukomys_damarensis
ENSSSCG00000024867	ISG20	92	49.686	ENSFHEG00000018658	isg20	69	44.915	Fundulus_heteroclitus
ENSSSCG00000024867	ISG20	92	46.541	ENSGMOG00000001258	isg20	73	46.541	Gadus_morhua
ENSSSCG00000024867	ISG20	95	48.780	ENSGALG00000044204	ISG20	65	48.780	Gallus_gallus
ENSSSCG00000024867	ISG20	96	50.602	ENSGAFG00000005685	isg20	74	50.602	Gambusia_affinis
ENSSSCG00000024867	ISG20	95	50.307	ENSGACG00000007047	isg20	51	50.307	Gasterosteus_aculeatus
ENSSSCG00000024867	ISG20	97	59.281	ENSGAGG00000013542	ISG20	96	59.281	Gopherus_agassizii
ENSSSCG00000024867	ISG20	99	80.473	ENSGGOG00000010365	ISG20	93	80.473	Gorilla_gorilla
ENSSSCG00000024867	ISG20	99	75.740	ENSHGLG00000009077	ISG20	93	75.740	Heterocephalus_glaber_female
ENSSSCG00000024867	ISG20	99	75.740	ENSHGLG00100005004	ISG20	93	75.740	Heterocephalus_glaber_male
ENSSSCG00000024867	ISG20	92	48.101	ENSHCOG00000013913	isg20l2	78	43.151	Hippocampus_comes
ENSSSCG00000024867	ISG20	99	74.556	ENSSTOG00000020467	ISG20	93	74.556	Ictidomys_tridecemlineatus
ENSSSCG00000024867	ISG20	100	75.439	ENSJJAG00000010531	-	94	75.439	Jaculus_jaculus
ENSSSCG00000024867	ISG20	92	48.428	ENSLACG00000018339	-	56	48.734	Latimeria_chalumnae
ENSSSCG00000024867	ISG20	96	49.398	ENSLOCG00000014240	isg20	75	49.398	Lepisosteus_oculatus
ENSSSCG00000024867	ISG20	99	78.698	ENSMFAG00000032331	ISG20	93	78.698	Macaca_fascicularis
ENSSSCG00000024867	ISG20	99	78.698	ENSMMUG00000007669	ISG20	93	78.698	Macaca_mulatta
ENSSSCG00000024867	ISG20	99	78.698	ENSMNEG00000030310	ISG20	93	78.698	Macaca_nemestrina
ENSSSCG00000024867	ISG20	99	78.698	ENSMLEG00000038761	ISG20	93	78.698	Mandrillus_leucophaeus
ENSSSCG00000024867	ISG20	99	73.373	ENSMAUG00000015001	-	92	73.373	Mesocricetus_auratus
ENSSSCG00000024867	ISG20	97	79.518	ENSMICG00000027508	ISG20	98	79.518	Microcebus_murinus
ENSSSCG00000024867	ISG20	99	69.822	ENSMOCG00000005940	-	95	69.822	Microtus_ochrogaster
ENSSSCG00000024867	ISG20	95	46.746	ENSMMOG00000019013	isg20	82	53.750	Mola_mola
ENSSSCG00000024867	ISG20	96	66.667	ENSMODG00000019583	ISG20	93	66.667	Monodelphis_domestica
ENSSSCG00000024867	ISG20	100	73.099	MGP_CAROLIEiJ_G0029873	-	99	75.000	Mus_caroli
ENSSSCG00000024867	ISG20	100	73.684	ENSMUSG00000039236	Isg20	99	75.694	Mus_musculus
ENSSSCG00000024867	ISG20	100	74.854	MGP_PahariEiJ_G0013095	-	99	76.389	Mus_pahari
ENSSSCG00000024867	ISG20	100	73.099	MGP_SPRETEiJ_G0030975	-	99	75.000	Mus_spretus
ENSSSCG00000024867	ISG20	99	70.414	ENSMPUG00000015816	ISG20	99	70.414	Mustela_putorius_furo
ENSSSCG00000024867	ISG20	99	73.964	ENSNGAG00000019782	-	95	73.964	Nannospalax_galili
ENSSSCG00000024867	ISG20	89	79.605	ENSNLEG00000033379	ISG20	93	79.605	Nomascus_leucogenys
ENSSSCG00000024867	ISG20	99	72.781	ENSODEG00000015032	ISG20	93	72.781	Octodon_degus
ENSSSCG00000024867	ISG20	92	49.682	ENSONIG00000001534	isg20l2	85	49.682	Oreochromis_niloticus
ENSSSCG00000024867	ISG20	80	65.942	ENSOANG00000006380	ISG20	67	69.106	Ornithorhynchus_anatinus
ENSSSCG00000024867	ISG20	99	75.740	ENSOCUG00000023346	ISG20	93	75.740	Oryctolagus_cuniculus
ENSSSCG00000024867	ISG20	93	48.125	ENSORLG00000029585	isg20	77	48.125	Oryzias_latipes
ENSSSCG00000024867	ISG20	93	48.750	ENSORLG00015016089	isg20	68	48.750	Oryzias_latipes_hsok
ENSSSCG00000024867	ISG20	92	47.170	ENSOMEG00000003990	isg20	90	46.835	Oryzias_melastigma
ENSSSCG00000024867	ISG20	100	78.363	ENSOGAG00000004742	ISG20	100	78.363	Otolemur_garnettii
ENSSSCG00000024867	ISG20	100	74.419	ENSOARG00000010964	ISG20	94	73.684	Ovis_aries
ENSSSCG00000024867	ISG20	99	79.290	ENSPPAG00000028868	ISG20	93	79.290	Pan_paniscus
ENSSSCG00000024867	ISG20	99	78.698	ENSPPRG00000023560	ISG20	99	78.698	Panthera_pardus
ENSSSCG00000024867	ISG20	81	79.856	ENSPTIG00000018498	ISG20	66	79.688	Panthera_tigris_altaica
ENSSSCG00000024867	ISG20	99	80.473	ENSPTRG00000044668	ISG20	93	80.473	Pan_troglodytes
ENSSSCG00000024867	ISG20	99	78.698	ENSPANG00000034658	ISG20	93	78.698	Papio_anubis
ENSSSCG00000024867	ISG20	92	47.799	ENSPMGG00000021232	isg20	78	47.799	Periophthalmus_magnuspinnatus
ENSSSCG00000024867	ISG20	99	73.964	ENSPEMG00000020302	-	92	73.964	Peromyscus_maniculatus_bairdii
ENSSSCG00000024867	ISG20	92	50.000	ENSPMAG00000001569	ISG20	86	50.000	Petromyzon_marinus
ENSSSCG00000024867	ISG20	91	47.134	ENSPMAG00000000577	isg20	86	47.134	Petromyzon_marinus
ENSSSCG00000024867	ISG20	98	67.857	ENSPCIG00000006405	ISG20	90	67.857	Phascolarctos_cinereus
ENSSSCG00000024867	ISG20	96	50.000	ENSPFOG00000003318	isg20	50	50.000	Poecilia_formosa
ENSSSCG00000024867	ISG20	96	50.000	ENSPLAG00000005932	isg20	80	48.428	Poecilia_latipinna
ENSSSCG00000024867	ISG20	96	50.000	ENSPMEG00000016899	isg20	74	50.000	Poecilia_mexicana
ENSSSCG00000024867	ISG20	81	51.079	ENSPREG00000005954	isg20	56	50.407	Poecilia_reticulata
ENSSSCG00000024867	ISG20	99	79.882	ENSPPYG00000006756	ISG20	93	79.882	Pongo_abelii
ENSSSCG00000024867	ISG20	99	76.923	ENSPCOG00000015727	ISG20	97	76.923	Propithecus_coquereli
ENSSSCG00000024867	ISG20	98	72.619	ENSRNOG00000054561	Isg20	94	73.457	Rattus_norvegicus
ENSSSCG00000024867	ISG20	99	79.290	ENSRBIG00000041506	ISG20	93	79.290	Rhinopithecus_bieti
ENSSSCG00000024867	ISG20	99	79.290	ENSRROG00000043326	ISG20	93	79.290	Rhinopithecus_roxellana
ENSSSCG00000024867	ISG20	99	77.515	ENSSBOG00000031539	ISG20	93	77.515	Saimiri_boliviensis_boliviensis
ENSSSCG00000024867	ISG20	98	67.066	ENSSHAG00000017049	ISG20	98	67.066	Sarcophilus_harrisii
ENSSSCG00000024867	ISG20	92	50.314	ENSSMAG00000004520	isg20	50	50.314	Scophthalmus_maximus
ENSSSCG00000024867	ISG20	94	64.596	ENSSPUG00000012061	ISG20	93	64.596	Sphenodon_punctatus
ENSSSCG00000024867	ISG20	88	54.605	ENSTNIG00000010389	isg20	75	54.605	Tetraodon_nigroviridis
ENSSSCG00000024867	ISG20	85	77.241	ENSUAMG00000019065	ISG20	82	80.328	Ursus_americanus
ENSSSCG00000024867	ISG20	99	83.432	ENSVVUG00000012013	ISG20	99	83.432	Vulpes_vulpes
ENSSSCG00000024867	ISG20	92	51.899	ENSXETG00000007588	aen	62	51.899	Xenopus_tropicalis
ENSSSCG00000024867	ISG20	96	51.205	ENSXMAG00000013066	isg20	52	50.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004527	exonuclease activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0008859	exoribonuclease II activity	-	IEA	Function
GO:0015030	Cajal body	-	ISS	Component
GO:0030619	U1 snRNA binding	-	ISS	Function
GO:0030620	U2 snRNA binding	-	ISS	Function
GO:0034511	U3 snoRNA binding	-	ISS	Function
GO:0045087	innate immune response	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	ISS	Process
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	-	IEA	Process