EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000024956 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 4789 bases
Position: chrX:83328743-83333531
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000019386	RRM_1	PF00076.22	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000028833	-	1041	-	ENSSSCP00000019386	346 (aa)	-	I3L5T6

Gene Model

Click here to download ENSSSCG00000024956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000024956	-	91	63.415	ENSSSCG00000014022	HNRNPH1	78	63.415
ENSSSCG00000024956	-	91	60.976	ENSSSCG00000033161	HNRNPH2	78	61.463
ENSSSCG00000024956	-	63	56.410	ENSSSCG00000010238	HNRNPH3	69	56.410
ENSSSCG00000024956	-	96	59.277	ENSSSCG00000010203	-	100	59.277
ENSSSCG00000024956	-	81	33.333	ENSSSCG00000008940	GRSF1	68	33.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000024956	-	96	58.373	ENSG00000169813	HNRNPF	100	71.429	Homo_sapiens
ENSSSCG00000024956	-	96	59.036	ENSAMEG00000018983	HNRNPF	100	59.036	Ailuropoda_melanoleuca
ENSSSCG00000024956	-	96	56.938	ENSANAG00000033285	-	100	56.938	Aotus_nancymaae
ENSSSCG00000024956	-	78	63.274	ENSANAG00000033452	-	70	63.274	Aotus_nancymaae
ENSSSCG00000024956	-	96	59.036	ENSBTAG00000008853	HNRNPF	100	59.036	Bos_taurus
ENSSSCG00000024956	-	92	64.912	ENSBTAG00000020513	-	81	64.912	Bos_taurus
ENSSSCG00000024956	-	96	58.134	ENSCJAG00000008291	HNRNPF	100	58.134	Callithrix_jacchus
ENSSSCG00000024956	-	96	59.036	ENSCAFG00000007044	HNRNPF	100	59.036	Canis_familiaris
ENSSSCG00000024956	-	96	59.036	ENSCHIG00000006714	HNRNPF	100	59.036	Capra_hircus
ENSSSCG00000024956	-	93	48.837	ENSCHIG00000022971	-	99	48.837	Capra_hircus
ENSSSCG00000024956	-	96	54.726	ENSTSYG00000002112	-	100	54.726	Carlito_syrichta
ENSSSCG00000024956	-	96	57.452	ENSTSYG00000030439	-	100	57.452	Carlito_syrichta
ENSSSCG00000024956	-	96	58.072	ENSCAPG00000011521	HNRNPF	99	58.072	Cavia_aperea
ENSSSCG00000024956	-	96	58.072	ENSCPOG00000003678	HNRNPF	99	58.072	Cavia_porcellus
ENSSSCG00000024956	-	96	60.638	ENSCCAG00000028687	-	100	60.638	Cebus_capucinus
ENSSSCG00000024956	-	96	58.134	ENSCCAG00000031457	-	100	58.134	Cebus_capucinus
ENSSSCG00000024956	-	96	58.072	ENSCLAG00000005161	HNRNPF	99	58.072	Chinchilla_lanigera
ENSSSCG00000024956	-	96	57.177	ENSCANG00000003086	-	100	57.177	Colobus_angolensis_palliatus
ENSSSCG00000024956	-	96	57.692	ENSCGRG00001016276	Hnrnpf	100	57.692	Cricetulus_griseus_chok1gshd
ENSSSCG00000024956	-	89	47.541	ENSCGRG00001016206	-	88	47.541	Cricetulus_griseus_chok1gshd
ENSSSCG00000024956	-	96	57.108	ENSDNOG00000030849	-	100	56.835	Dasypus_novemcinctus
ENSSSCG00000024956	-	96	54.791	ENSDORG00000008260	-	100	54.791	Dipodomys_ordii
ENSSSCG00000024956	-	96	52.048	ENSDORG00000005431	-	100	52.048	Dipodomys_ordii
ENSSSCG00000024956	-	96	57.108	ENSDORG00000024298	-	100	57.108	Dipodomys_ordii
ENSSSCG00000024956	-	96	56.386	ENSDORG00000024936	-	100	56.386	Dipodomys_ordii
ENSSSCG00000024956	-	96	58.554	ENSEASG00005006903	HNRNPF	100	58.554	Equus_asinus_asinus
ENSSSCG00000024956	-	96	57.711	ENSECAG00000003229	HNRNPF	100	57.711	Equus_caballus
ENSSSCG00000024956	-	96	59.036	ENSFCAG00000028219	-	100	59.036	Felis_catus
ENSSSCG00000024956	-	96	49.010	ENSFDAG00000015308	-	99	49.010	Fukomys_damarensis
ENSSSCG00000024956	-	95	71.556	ENSFDAG00000007858	-	85	71.556	Fukomys_damarensis
ENSSSCG00000024956	-	96	58.072	ENSFDAG00000011431	-	99	58.072	Fukomys_damarensis
ENSSSCG00000024956	-	96	58.621	ENSGGOG00000010867	HNRNPF	93	58.621	Gorilla_gorilla
ENSSSCG00000024956	-	96	57.831	ENSHGLG00000000147	-	99	57.831	Heterocephalus_glaber_female
ENSSSCG00000024956	-	95	68.000	ENSHGLG00000017607	-	100	68.000	Heterocephalus_glaber_female
ENSSSCG00000024956	-	96	73.894	ENSHGLG00000010276	-	89	73.894	Heterocephalus_glaber_female
ENSSSCG00000024956	-	95	56.952	ENSHGLG00000014139	-	97	56.952	Heterocephalus_glaber_female
ENSSSCG00000024956	-	90	68.000	ENSHGLG00100019910	-	100	68.000	Heterocephalus_glaber_male
ENSSSCG00000024956	-	96	72.444	ENSHGLG00100019572	-	84	72.444	Heterocephalus_glaber_male
ENSSSCG00000024956	-	84	73.333	ENSHGLG00100010905	-	81	73.333	Heterocephalus_glaber_male
ENSSSCG00000024956	-	96	73.333	ENSHGLG00100019558	-	89	73.333	Heterocephalus_glaber_male
ENSSSCG00000024956	-	95	57.463	ENSHGLG00100020825	-	100	57.463	Heterocephalus_glaber_male
ENSSSCG00000024956	-	96	52.300	ENSSTOG00000022853	-	100	52.300	Ictidomys_tridecemlineatus
ENSSSCG00000024956	-	96	58.173	ENSSTOG00000025560	-	100	58.173	Ictidomys_tridecemlineatus
ENSSSCG00000024956	-	92	66.332	ENSSTOG00000023820	-	81	66.332	Ictidomys_tridecemlineatus
ENSSSCG00000024956	-	96	40.220	ENSJJAG00000014424	-	100	40.220	Jaculus_jaculus
ENSSSCG00000024956	-	96	52.513	ENSJJAG00000022288	-	100	52.513	Jaculus_jaculus
ENSSSCG00000024956	-	85	72.472	ENSJJAG00000014334	-	86	72.472	Jaculus_jaculus
ENSSSCG00000024956	-	96	53.581	ENSJJAG00000000554	-	100	53.581	Jaculus_jaculus
ENSSSCG00000024956	-	96	71.707	ENSJJAG00000017385	-	81	71.707	Jaculus_jaculus
ENSSSCG00000024956	-	96	58.795	ENSLAFG00000000424	HNRNPF	99	58.313	Loxodonta_africana
ENSSSCG00000024956	-	96	58.373	ENSMFAG00000021184	HNRNPF	100	58.373	Macaca_fascicularis
ENSSSCG00000024956	-	96	58.373	ENSMMUG00000020982	HNRNPF	100	58.373	Macaca_mulatta
ENSSSCG00000024956	-	96	58.373	ENSMLEG00000023515	HNRNPF	100	58.373	Mandrillus_leucophaeus
ENSSSCG00000024956	-	96	57.692	ENSMAUG00000007892	Hnrnpf	100	57.692	Mesocricetus_auratus
ENSSSCG00000024956	-	99	67.805	ENSMICG00000044171	-	95	67.805	Microcebus_murinus
ENSSSCG00000024956	-	95	51.951	ENSMICG00000043739	-	99	51.951	Microcebus_murinus
ENSSSCG00000024956	-	96	72.124	ENSMOCG00000014915	Hnrnpf	90	72.124	Microtus_ochrogaster
ENSSSCG00000024956	-	89	73.009	ENSMUSG00000042079	Hnrnpf	99	75.610	Mus_musculus
ENSSSCG00000024956	-	96	56.971	MGP_PahariEiJ_G0026903	-	100	56.971	Mus_pahari
ENSSSCG00000024956	-	96	59.148	ENSMPUG00000017283	HNRNPF	99	59.148	Mustela_putorius_furo
ENSSSCG00000024956	-	96	73.009	ENSMLUG00000007261	HNRNPF	90	73.009	Myotis_lucifugus
ENSSSCG00000024956	-	96	57.212	ENSNGAG00000010409	-	100	57.212	Nannospalax_galili
ENSSSCG00000024956	-	96	55.670	ENSNGAG00000014079	-	100	55.670	Nannospalax_galili
ENSSSCG00000024956	-	92	45.119	ENSNGAG00000009482	-	97	45.789	Nannospalax_galili
ENSSSCG00000024956	-	96	58.134	ENSNLEG00000019098	HNRNPF	100	58.134	Nomascus_leucogenys
ENSSSCG00000024956	-	96	58.072	ENSODEG00000019266	-	99	58.072	Octodon_degus
ENSSSCG00000024956	-	95	71.111	ENSODEG00000002359	-	84	71.111	Octodon_degus
ENSSSCG00000024956	-	96	54.785	ENSOCUG00000024604	-	100	54.785	Oryctolagus_cuniculus
ENSSSCG00000024956	-	96	58.134	ENSOCUG00000024719	-	100	58.134	Oryctolagus_cuniculus
ENSSSCG00000024956	-	96	74.312	ENSOGAG00000030480	-	84	74.312	Otolemur_garnettii
ENSSSCG00000024956	-	96	72.444	ENSOGAG00000013734	-	89	72.444	Otolemur_garnettii
ENSSSCG00000024956	-	96	57.181	ENSOARG00000003995	HNRNPF	93	57.181	Ovis_aries
ENSSSCG00000024956	-	96	52.970	ENSOARG00000016658	-	100	52.970	Ovis_aries
ENSSSCG00000024956	-	96	59.036	ENSPPRG00000021222	HNRNPF	100	59.036	Panthera_pardus
ENSSSCG00000024956	-	96	59.036	ENSPTIG00000009644	HNRNPF	100	59.036	Panthera_tigris_altaica
ENSSSCG00000024956	-	96	58.373	ENSPTRG00000002446	HNRNPF	100	58.373	Pan_troglodytes
ENSSSCG00000024956	-	96	58.612	ENSPANG00000002212	HNRNPF	100	58.612	Papio_anubis
ENSSSCG00000024956	-	96	58.373	ENSPPYG00000002212	HNRNPF	100	58.373	Pongo_abelii
ENSSSCG00000024956	-	96	59.135	ENSPCAG00000013169	HNRNPF	100	58.654	Procavia_capensis
ENSSSCG00000024956	-	96	58.072	ENSPVAG00000011646	HNRNPF	100	58.072	Pteropus_vampyrus
ENSSSCG00000024956	-	96	57.692	ENSRNOG00000014562	Hnrnpf	100	57.692	Rattus_norvegicus
ENSSSCG00000024956	-	96	58.373	ENSRROG00000001235	HNRNPF	100	58.373	Rhinopithecus_roxellana
ENSSSCG00000024956	-	96	58.134	ENSSBOG00000018361	HNRNPF	100	58.134	Saimiri_boliviensis_boliviensis
ENSSSCG00000024956	-	96	58.313	ENSSARG00000010059	HNRNPF	100	58.313	Sorex_araneus
ENSSSCG00000024956	-	68	55.294	ENSTBEG00000016094	HNRNPF	61	55.294	Tupaia_belangeri
ENSSSCG00000024956	-	96	59.036	ENSUAMG00000000455	HNRNPF	100	59.036	Ursus_americanus
ENSSSCG00000024956	-	96	59.036	ENSUMAG00000016485	HNRNPF	100	59.036	Ursus_maritimus
ENSSSCG00000024956	-	96	59.036	ENSVVUG00000021261	HNRNPF	100	59.036	Vulpes_vulpes