EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000024974 (Gene tree)
Gene ID
100628232
Gene Symbol
RPL13
Alias
-
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
2414 bases
Position
chr6:410922-413335
Accession
100628232
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000027026Ribosomal_L13ePF01294.181.3e-8211
ENSSSCP00000056427Ribosomal_L13ePF01294.181.3e-8211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000047234RPL13-2021151-ENSSSCP00000056427211 (aa)-I3LSD3
ENSSSCT00000028682RPL13-201995XM_013994186ENSSSCP00000027026211 (aa)XP_013849640I3LSD3
Gene Model
Click here to download ENSSSCG00000024974's gene model file
Pathways
Pathway IDPathway NameSource
ssc03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000024974's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000024974RPL139973.810ENSSSCG00000003723-9973.810
ENSSSCG00000024974RPL139961.429ENSSSCG00000029020-9661.429
ENSSSCG00000024974RPL139966.029ENSSSCG00000033294-9966.184
ENSSSCG00000024974RPL139971.154ENSSSCG00000007813-9971.154
ENSSSCG00000024974RPL1310071.090ENSSSCG00000036198-10071.090
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000024974RPL1310096.682ENSG00000167526RPL1310096.825Homo_sapiens
ENSSSCG00000024974RPL1310088.626ENSAPOG00000010933rpl1310088.626Acanthochromis_polyacanthus
ENSSSCG00000024974RPL1310083.886ENSAMEG00000001111RPL1310085.377Ailuropoda_melanoleuca
ENSSSCG00000024974RPL1310089.100ENSACIG00000000422rpl1310089.100Amphilophus_citrinellus
ENSSSCG00000024974RPL1310088.626ENSAOCG00000014635rpl1310088.626Amphiprion_ocellaris
ENSSSCG00000024974RPL1310088.626ENSAPEG00000011271rpl1310088.626Amphiprion_percula
ENSSSCG00000024974RPL1310088.152ENSATEG00000004902rpl1310088.152Anabas_testudineus
ENSSSCG00000024974RPL1310091.469ENSACAG00000017072RPL1310091.469Anolis_carolinensis
ENSSSCG00000024974RPL1310097.156ENSANAG00000030539RPL1310097.156Aotus_nancymaae
ENSSSCG00000024974RPL1310088.626ENSACLG00000001642rpl1310088.626Astatotilapia_calliptera
ENSSSCG00000024974RPL1310085.308ENSAMXG00000006495rpl1310085.308Astyanax_mexicanus
ENSSSCG00000024974RPL1310089.100ENSBTAG00000033143-10089.100Bos_taurus
ENSSSCG00000024974RPL1310099.052ENSBTAG00000012044RPL137299.052Bos_taurus
ENSSSCG00000024974RPL139858.738WBGene00004425rpl-139958.738Caenorhabditis_elegans
ENSSSCG00000024974RPL1310097.156ENSCJAG00000009672-10097.156Callithrix_jacchus
ENSSSCG00000024974RPL139996.667ENSCJAG00000016268-9996.667Callithrix_jacchus
ENSSSCG00000024974RPL138761.749ENSCAFG00000002388-10060.656Canis_familiaris
ENSSSCG00000024974RPL1310097.630ENSCAFG00000019840RPL1310097.630Canis_familiaris
ENSSSCG00000024974RPL1310097.630ENSCAFG00020005125RPL1310097.630Canis_lupus_dingo
ENSSSCG00000024974RPL139971.154ENSCAFG00020024795-9371.154Canis_lupus_dingo
ENSSSCG00000024974RPL1310080.569ENSCHIG00000026795-9280.569Capra_hircus
ENSSSCG00000024974RPL139593.532ENSCHIG00000017227-8793.532Capra_hircus
ENSSSCG00000024974RPL1310099.052ENSCHIG00000001441-10099.052Capra_hircus
ENSSSCG00000024974RPL1310097.156ENSTSYG00000027423RPL1310097.156Carlito_syrichta
ENSSSCG00000024974RPL1310097.630ENSCPOG00000027348RPL1310097.630Cavia_porcellus
ENSSSCG00000024974RPL1310097.156ENSCCAG00000024248RPL1310097.156Cebus_capucinus
ENSSSCG00000024974RPL139971.905ENSCATG00000038806-9671.905Cercocebus_atys
ENSSSCG00000024974RPL1310097.630ENSCATG00000042426RPL1310097.630Cercocebus_atys
ENSSSCG00000024974RPL1310097.630ENSCLAG00000003801RPL1310097.630Chinchilla_lanigera
ENSSSCG00000024974RPL1310096.682ENSCSAG00000000476-10096.682Chlorocebus_sabaeus
ENSSSCG00000024974RPL1310093.365ENSCPBG00000013618RPL1310093.365Chrysemys_picta_bellii
ENSSSCG00000024974RPL139767.647ENSCING00000002582-9267.647Ciona_intestinalis
ENSSSCG00000024974RPL139763.235ENSCSAVG00000007075-9866.190Ciona_savignyi
ENSSSCG00000024974RPL136797.887ENSCANG00000028258RPL137797.887Colobus_angolensis_palliatus
ENSSSCG00000024974RPL1310079.147ENSCGRG00001023328-10079.147Cricetulus_griseus_chok1gshd
ENSSSCG00000024974RPL139374.112ENSCGRG00001008381-10074.112Cricetulus_griseus_chok1gshd
ENSSSCG00000024974RPL1310096.682ENSCGRG00001022563Rpl1310096.682Cricetulus_griseus_chok1gshd
ENSSSCG00000024974RPL138576.667ENSCGRG00000016503-10076.667Cricetulus_griseus_crigri
ENSSSCG00000024974RPL1310096.209ENSCGRG00000014556Rpl1310096.209Cricetulus_griseus_crigri
ENSSSCG00000024974RPL1310087.204ENSCSEG00000008346rpl1310087.204Cynoglossus_semilaevis
ENSSSCG00000024974RPL1310087.678ENSCVAG00000019742rpl1310087.678Cyprinodon_variegatus
ENSSSCG00000024974RPL1310087.204ENSDARG00000099380rpl1310087.204Danio_rerio
ENSSSCG00000024974RPL1310097.156ENSDNOG00000034247RPL1310097.156Dasypus_novemcinctus
ENSSSCG00000024974RPL138195.882ENSDORG00000028330Rpl1310095.882Dipodomys_ordii
ENSSSCG00000024974RPL139564.563FBgn0011272RpL139364.563Drosophila_melanogaster
ENSSSCG00000024974RPL139882.381ENSETEG00000015057-9882.381Echinops_telfairi
ENSSSCG00000024974RPL138966.489ENSETEG00000004518-9966.489Echinops_telfairi
ENSSSCG00000024974RPL1310065.877ENSEBUG00000000730rpl139965.877Eptatretus_burgeri
ENSSSCG00000024974RPL139960.952ENSEEUG00000006113-9960.476Erinaceus_europaeus
ENSSSCG00000024974RPL136692.857ENSEEUG00000011190-10092.857Erinaceus_europaeus
ENSSSCG00000024974RPL1310082.464ENSELUG00000014509rpl1310082.464Esox_lucius
ENSSSCG00000024974RPL1310095.735ENSFCAG00000003338RPL1310095.735Felis_catus
ENSSSCG00000024974RPL138765.054ENSFCAG00000029961-9361.497Felis_catus
ENSSSCG00000024974RPL1310089.573ENSFALG00000003173RPL1310089.573Ficedula_albicollis
ENSSSCG00000024974RPL1310097.630ENSFDAG00000011310RPL1310097.630Fukomys_damarensis
ENSSSCG00000024974RPL1310087.678ENSFHEG00000006122rpl1310087.678Fundulus_heteroclitus
ENSSSCG00000024974RPL1310081.043ENSGMOG00000002752rpl1310079.621Gadus_morhua
ENSSSCG00000024974RPL1310091.943ENSGALG00000006179RPL1310091.943Gallus_gallus
ENSSSCG00000024974RPL1310080.569ENSGAFG00000017260rpl1310080.569Gambusia_affinis
ENSSSCG00000024974RPL1310083.886ENSGACG00000015752rpl1310083.886Gasterosteus_aculeatus
ENSSSCG00000024974RPL1310093.365ENSGAGG00000003371RPL1310093.365Gopherus_agassizii
ENSSSCG00000024974RPL138397.159ENSGGOG00000025427RPL1310097.159Gorilla_gorilla
ENSSSCG00000024974RPL1310076.777ENSGGOG00000026762-10076.777Gorilla_gorilla
ENSSSCG00000024974RPL1310088.152ENSHBUG00000013579rpl1310088.152Haplochromis_burtoni
ENSSSCG00000024974RPL1310097.156ENSHGLG00000010880RPL1310097.156Heterocephalus_glaber_female
ENSSSCG00000024974RPL1310097.156ENSHGLG00100018449RPL1310097.156Heterocephalus_glaber_male
ENSSSCG00000024974RPL1310085.308ENSHCOG00000002997rpl1310085.308Hippocampus_comes
ENSSSCG00000024974RPL1310084.360ENSIPUG00000009775rpl1310084.360Ictalurus_punctatus
ENSSSCG00000024974RPL1310095.261ENSSTOG00000011963RPL1310093.839Ictidomys_tridecemlineatus
ENSSSCG00000024974RPL1310096.209ENSJJAG00000014012Rpl1310096.209Jaculus_jaculus
ENSSSCG00000024974RPL1310082.464ENSJJAG00000000236-10082.464Jaculus_jaculus
ENSSSCG00000024974RPL1310088.626ENSKMAG00000006540rpl1310088.626Kryptolebias_marmoratus
ENSSSCG00000024974RPL1310086.730ENSLBEG00000026455rpl1310086.730Labrus_bergylta
ENSSSCG00000024974RPL138964.211ENSLACG00000000752-9066.667Latimeria_chalumnae
ENSSSCG00000024974RPL1310087.204ENSLACG00000013768rpl1310087.204Latimeria_chalumnae
ENSSSCG00000024974RPL139165.990ENSLACG00000002299-9465.482Latimeria_chalumnae
ENSSSCG00000024974RPL135678.151ENSLACG00000005311-10078.151Latimeria_chalumnae
ENSSSCG00000024974RPL138465.169ENSLACG00000004644-9765.318Latimeria_chalumnae
ENSSSCG00000024974RPL136080.315ENSLACG00000014843-9480.315Latimeria_chalumnae
ENSSSCG00000024974RPL136068.254ENSLACG00000001306-9167.769Latimeria_chalumnae
ENSSSCG00000024974RPL1310087.678ENSLOCG00000004063rpl1310087.678Lepisosteus_oculatus
ENSSSCG00000024974RPL1310096.682ENSLAFG00000004054RPL1310096.682Loxodonta_africana
ENSSSCG00000024974RPL1310071.090ENSMFAG00000046109-9771.090Macaca_fascicularis
ENSSSCG00000024974RPL1310097.156ENSMFAG00000027717-10097.156Macaca_fascicularis
ENSSSCG00000024974RPL139970.000ENSMMUG00000038060-9670.000Macaca_mulatta
ENSSSCG00000024974RPL1310097.156ENSMMUG00000017928RPL1310097.156Macaca_mulatta
ENSSSCG00000024974RPL139368.159ENSMNEG00000033097-8674.269Macaca_nemestrina
ENSSSCG00000024974RPL139971.429ENSMNEG00000030483-9671.429Macaca_nemestrina
ENSSSCG00000024974RPL1310075.829ENSMLEG00000036728-10075.829Mandrillus_leucophaeus
ENSSSCG00000024974RPL139972.857ENSMLEG00000033776-9672.857Mandrillus_leucophaeus
ENSSSCG00000024974RPL1310087.678ENSMAMG00000021552rpl1310087.678Mastacembelus_armatus
ENSSSCG00000024974RPL1310088.626ENSMZEG00005014343rpl1310088.626Maylandia_zebra
ENSSSCG00000024974RPL138489.831ENSMGAG00000008027RPL139789.535Meleagris_gallopavo
ENSSSCG00000024974RPL1310091.469ENSMAUG00000016802-10091.469Mesocricetus_auratus
ENSSSCG00000024974RPL137597.484ENSMAUG00000020543-10097.484Mesocricetus_auratus
ENSSSCG00000024974RPL137389.677ENSMICG00000027620-9089.677Microcebus_murinus
ENSSSCG00000024974RPL1310096.209ENSMICG00000043954-10096.209Microcebus_murinus
ENSSSCG00000024974RPL1310085.308ENSMOCG00000021875-10082.710Microtus_ochrogaster
ENSSSCG00000024974RPL1310097.156ENSMOCG00000009058-10097.156Microtus_ochrogaster
ENSSSCG00000024974RPL1310095.735ENSMOCG00000002216-10095.735Microtus_ochrogaster
ENSSSCG00000024974RPL1310079.147ENSMOCG00000011602-10079.147Microtus_ochrogaster
ENSSSCG00000024974RPL1310085.782ENSMOCG00000016985-10085.308Microtus_ochrogaster
ENSSSCG00000024974RPL1310088.152ENSMMOG00000016577rpl1310088.152Mola_mola
ENSSSCG00000024974RPL1310096.209ENSMODG00000003663RPL1310096.209Monodelphis_domestica
ENSSSCG00000024974RPL1310088.152ENSMALG00000020934rpl1310088.152Monopterus_albus
ENSSSCG00000024974RPL1310096.209MGP_CAROLIEiJ_G0031676Rpl1310096.209Mus_caroli
ENSSSCG00000024974RPL1310096.682ENSMUSG00000000740Rpl1310096.682Mus_musculus
ENSSSCG00000024974RPL1310096.209MGP_PahariEiJ_G0023274Rpl1310096.209Mus_pahari
ENSSSCG00000024974RPL137286.567MGP_PahariEiJ_G0022842-10086.567Mus_pahari
ENSSSCG00000024974RPL139491.960MGP_SPRETEiJ_G0031839-7891.960Mus_spretus
ENSSSCG00000024974RPL1310096.682MGP_SPRETEiJ_G0032794Rpl1310096.682Mus_spretus
ENSSSCG00000024974RPL139956.938ENSMPUG00000001481-9655.502Mustela_putorius_furo
ENSSSCG00000024974RPL1310097.630ENSMLUG00000010950RPL139497.630Myotis_lucifugus
ENSSSCG00000024974RPL138776.216ENSNGAG00000014655-9576.216Nannospalax_galili
ENSSSCG00000024974RPL1310096.209ENSNGAG00000018467Rpl1310096.209Nannospalax_galili
ENSSSCG00000024974RPL138468.539ENSNGAG00000012072-9568.605Nannospalax_galili
ENSSSCG00000024974RPL1310088.152ENSNBRG00000011031rpl1310088.152Neolamprologus_brichardi
ENSSSCG00000024974RPL1310096.682ENSNLEG00000015774RPL1310096.682Nomascus_leucogenys
ENSSSCG00000024974RPL1310076.415ENSNLEG00000028759-10076.887Nomascus_leucogenys
ENSSSCG00000024974RPL1310096.682ENSODEG00000004235-10096.682Octodon_degus
ENSSSCG00000024974RPL1310090.995ENSODEG00000019351-10090.995Octodon_degus
ENSSSCG00000024974RPL1310096.209ENSODEG00000019458-10096.209Octodon_degus
ENSSSCG00000024974RPL1310095.261ENSODEG00000019297-10095.261Octodon_degus
ENSSSCG00000024974RPL1310094.787ENSODEG00000020384-10094.787Octodon_degus
ENSSSCG00000024974RPL1310093.365ENSODEG00000019915-10093.365Octodon_degus
ENSSSCG00000024974RPL1310088.152ENSONIG00000005934rpl1310088.152Oreochromis_niloticus
ENSSSCG00000024974RPL1310095.735ENSOANG00000006729RPL1310095.735Ornithorhynchus_anatinus
ENSSSCG00000024974RPL1310090.995ENSOCUG00000022399-10091.469Oryctolagus_cuniculus
ENSSSCG00000024974RPL1310092.417ENSOCUG00000024415-10092.417Oryctolagus_cuniculus
ENSSSCG00000024974RPL1310089.573ENSOCUG00000007536-10089.100Oryctolagus_cuniculus
ENSSSCG00000024974RPL1310088.152ENSORLG00000007654rpl1310088.152Oryzias_latipes
ENSSSCG00000024974RPL1310089.100ENSORLG00020009960rpl1310089.100Oryzias_latipes_hni
ENSSSCG00000024974RPL1310089.100ENSORLG00015008108rpl1310089.100Oryzias_latipes_hsok
ENSSSCG00000024974RPL1310089.573ENSOMEG00000001728rpl1310089.573Oryzias_melastigma
ENSSSCG00000024974RPL1310097.156ENSOGAG00000026444RPL1310097.156Otolemur_garnettii
ENSSSCG00000024974RPL1310090.995ENSOARG00000003957-7190.995Ovis_aries
ENSSSCG00000024974RPL139990.952ENSPPAG00000042590-9690.952Pan_paniscus
ENSSSCG00000024974RPL138397.143ENSPPAG00000029415-10097.143Pan_paniscus
ENSSSCG00000024974RPL1310076.303ENSPPAG00000041631-10076.303Pan_paniscus
ENSSSCG00000024974RPL1310095.735ENSPPRG00000003949RPL1310095.735Panthera_pardus
ENSSSCG00000024974RPL138465.922ENSPPRG00000006057-8662.222Panthera_pardus
ENSSSCG00000024974RPL136192.969ENSPTIG00000010985RPL138492.969Panthera_tigris_altaica
ENSSSCG00000024974RPL138465.922ENSPTIG00000014719-8662.222Panthera_tigris_altaica
ENSSSCG00000024974RPL1310075.829ENSPTRG00000047911-10075.829Pan_troglodytes
ENSSSCG00000024974RPL1310090.995ENSPTRG00000041770-10090.995Pan_troglodytes
ENSSSCG00000024974RPL1310097.156ENSPTRG00000008480RPL1310097.156Pan_troglodytes
ENSSSCG00000024974RPL1310097.630ENSPANG00000031667RPL1310097.630Papio_anubis
ENSSSCG00000024974RPL1310089.100ENSPKIG00000001789rpl1310089.100Paramormyrops_kingsleyae
ENSSSCG00000024974RPL1310092.891ENSPSIG00000015634RPL1310092.891Pelodiscus_sinensis
ENSSSCG00000024974RPL1310086.256ENSPMGG00000006067rpl1310086.256Periophthalmus_magnuspinnatus
ENSSSCG00000024974RPL1310096.682ENSPEMG00000010342Rpl1310096.682Peromyscus_maniculatus_bairdii
ENSSSCG00000024974RPL1310087.678ENSPFOG00000013435rpl1310087.678Poecilia_formosa
ENSSSCG00000024974RPL1310087.678ENSPLAG00000004085rpl1310087.678Poecilia_latipinna
ENSSSCG00000024974RPL1310087.678ENSPMEG00000015599rpl1310087.678Poecilia_mexicana
ENSSSCG00000024974RPL1310087.204ENSPREG00000023190rpl1310087.204Poecilia_reticulata
ENSSSCG00000024974RPL1310096.682ENSPCAG00000015461RPL1310096.682Procavia_capensis
ENSSSCG00000024974RPL1310097.156ENSPCOG00000024647RPL1310097.156Propithecus_coquereli
ENSSSCG00000024974RPL1310093.839ENSPVAG00000015130RPL1310093.839Pteropus_vampyrus
ENSSSCG00000024974RPL1310088.152ENSPNYG00000013189rpl1310088.152Pundamilia_nyererei
ENSSSCG00000024974RPL1310087.678ENSPNAG00000002916rpl1310087.678Pygocentrus_nattereri
ENSSSCG00000024974RPL1310094.787ENSRNOG00000055911LOC10036125910094.787Rattus_norvegicus
ENSSSCG00000024974RPL139990.000ENSRNOG00000059545AC114446.110087.736Rattus_norvegicus
ENSSSCG00000024974RPL1310090.521ENSRNOG00000029227AABR07054469.110090.521Rattus_norvegicus
ENSSSCG00000024974RPL1310094.313ENSRNOG00000061438LOC10036049110094.313Rattus_norvegicus
ENSSSCG00000024974RPL1310095.735ENSRNOG00000015335Rpl1310095.735Rattus_norvegicus
ENSSSCG00000024974RPL139972.857ENSRBIG00000010434-8972.857Rhinopithecus_bieti
ENSSSCG00000024974RPL1310097.630ENSRBIG00000031937RPL1310097.630Rhinopithecus_bieti
ENSSSCG00000024974RPL1310097.630ENSRROG00000036999-10097.630Rhinopithecus_roxellana
ENSSSCG00000024974RPL139972.857ENSRROG00000025626-8972.857Rhinopithecus_roxellana
ENSSSCG00000024974RPL139249.744YMR142CRPL13B10050.943Saccharomyces_cerevisiae
ENSSSCG00000024974RPL139249.231YDL082WRPL13A10050.472Saccharomyces_cerevisiae
ENSSSCG00000024974RPL1310097.156ENSSBOG00000028589-10097.156Saimiri_boliviensis_boliviensis
ENSSSCG00000024974RPL1310075.829ENSSBOG00000019618-10072.897Saimiri_boliviensis_boliviensis
ENSSSCG00000024974RPL138262.209ENSSHAG00000010433-10062.209Sarcophilus_harrisii
ENSSSCG00000024974RPL1310087.678ENSSFOG00015019594rpl1310087.678Scleropages_formosus
ENSSSCG00000024974RPL1310085.308ENSSMAG00000021443rpl1310085.308Scophthalmus_maximus
ENSSSCG00000024974RPL1310088.626ENSSDUG00000001262rpl1310088.626Seriola_dumerili
ENSSSCG00000024974RPL139651.196ENSSLDG00000007067-9451.196Seriola_lalandi_dorsalis
ENSSSCG00000024974RPL1310088.626ENSSLDG00000021182rpl1310088.626Seriola_lalandi_dorsalis
ENSSSCG00000024974RPL137694.375ENSSPUG00000006904RPL138994.375Sphenodon_punctatus
ENSSSCG00000024974RPL1310088.626ENSSPAG00000020434rpl1310088.626Stegastes_partitus
ENSSSCG00000024974RPL1310087.678ENSTGUG00000007874RPL1310087.678Taeniopygia_guttata
ENSSSCG00000024974RPL1310087.204ENSTRUG00000021170rpl1310087.204Takifugu_rubripes
ENSSSCG00000024974RPL1310090.047ENSTNIG00000009349rpl1310090.047Tetraodon_nigroviridis
ENSSSCG00000024974RPL1310099.052ENSTTRG00000004374RPL1310099.052Tursiops_truncatus
ENSSSCG00000024974RPL1310097.156ENSUAMG00000020363RPL1310097.156Ursus_americanus
ENSSSCG00000024974RPL136088.889ENSVPAG00000000569-10088.889Vicugna_pacos
ENSSSCG00000024974RPL139458.049ENSVVUG00000005779-9255.714Vulpes_vulpes
ENSSSCG00000024974RPL1310090.047ENSVVUG00000003839-10090.047Vulpes_vulpes
ENSSSCG00000024974RPL1310089.100ENSXETG00000019835rpl1310089.100Xenopus_tropicalis
ENSSSCG00000024974RPL1310087.204ENSXCOG00000011315rpl1310087.204Xiphophorus_couchianus
ENSSSCG00000024974RPL1310087.678ENSXMAG00000003221rpl1310087.678Xiphophorus_maculatus

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